RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 H3BSH0 61 aa2.5□□□□□ -2.01
SEC22A-207ENST00000481965 MIFP14174 115 aa2.5□□□□□ -2.01
SEC22A-207ENST00000481965 RAB5CP51148 216 aa2.5□□□□□ -2.01
SEC22A-207ENST00000481965 LSM3P62310 102 aaKnown RBP2.5□□□□□ -2.01
SEC22A-207ENST00000481965 PPP3R1P63098 170 aa2.5□□□□□ -2.01
SEC22A-207ENST00000481965 MRPS36P82909 103 aaKnown RBP2.5□□□□□ -2.01
SEC22A-207ENST00000481965 HSD17B12Q53GQ0 312 aa2.5□□□□□ -2.01
SEC22A-207ENST00000481965 TMEM14EPQ6UXP3 125 aa2.5□□□□□ -2.01
SEC22A-207ENST00000481965 LINC00311Q8N616 119 aa2.5□□□□□ -2.01
SEC22A-207ENST00000481965 OR5AK2Q8NH90 309 aa2.5□□□□□ -2.01
SEC22A-207ENST00000481965 C4orf3Q8WVX3 66 aa2.5□□□□□ -2.01
SEC22A-207ENST00000481965 OR4C12Q96R67 309 aa2.5□□□□□ -2.01
SEC22A-207ENST00000481965 CST11Q9H112 138 aa2.5□□□□□ -2.01
SEC22A-207ENST00000481965 TRBV6-5A0A0K0K1A5 114 aa2.49□□□□□ -2.01
SEC22A-207ENST00000481965 TPT1P13693 172 aaKnown RBP2.49□□□□□ -2.01
SEC22A-207ENST00000481965 ZNF93P35789 620 aaPredicted RBP2.49□□□□□ -2.01
SEC22A-207ENST00000481965 NCS1P62166 190 aa2.49□□□□□ -2.01
SEC22A-207ENST00000481965 SNRPGP62308 76 aaKnown RBP2.49□□□□□ -2.01
SEC22A-207ENST00000481965 CDK5R1Q15078 307 aa2.49□□□□□ -2.01
SEC22A-207ENST00000481965 PLGLAQ15195 96 aa2.49□□□□□ -2.01
SEC22A-207ENST00000481965 MPV17LQ2QL34 196 aa2.49□□□□□ -2.01
SEC22A-207ENST00000481965 RNASE10Q5GAN6 216 aaKnown RBP2.49□□□□□ -2.01
SEC22A-207ENST00000481965 C10orf99Q6UWK7 81 aa2.49□□□□□ -2.01
SEC22A-207ENST00000481965 TCTEX1D1Q8N7M0 179 aa2.49□□□□□ -2.01
SEC22A-207ENST00000481965 TAF9BQ9HBM6 251 aa2.49□□□□□ -2.01
SEC22A-207ENST00000481965 ABRACLQ9P1F3 81 aa2.49□□□□□ -2.01
SEC22A-207ENST00000481965 COL7A1Q02388 2944 aa2.48□□□□□ -2.01
SEC22A-207ENST00000481965 TRGV2A0A075B6R0 118 aa2.48□□□□□ -2.01
SEC22A-207ENST00000481965 OR2T8A6NH00 312 aa2.48□□□□□ -2.01
SEC22A-207ENST00000481965 UQCRQO14949 82 aa2.48□□□□□ -2.01
SEC22A-207ENST00000481965 YPEL1O60688 119 aa2.48□□□□□ -2.01
SEC22A-207ENST00000481965 ZNF137PP52743 207 aa2.48□□□□□ -2.01
SEC22A-207ENST00000481965 FOXA3P55318 350 aaPredicted RBP2.48□□□□□ -2.01
SEC22A-207ENST00000481965 Q8N6K4 173 aa2.48□□□□□ -2.01
SEC22A-207ENST00000481965 OR2T35Q8NGX2 323 aa2.48□□□□□ -2.01
SEC22A-207ENST00000481965 LEAP2Q969E1 77 aa2.48□□□□□ -2.01
SEC22A-207ENST00000481965 BANF2Q9H503 90 aa2.48□□□□□ -2.01
SEC22A-207ENST00000481965 STAB2Q8WWQ8 2551 aa2.48□□□□□ -2.01
SEC22A-207ENST00000481965 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.47□□□□□ -2.01
SEC22A-207ENST00000481965 CCDC160A6NGH7 325 aa2.47□□□□□ -2.01
SEC22A-207ENST00000481965 M0R129 80 aa2.47□□□□□ -2.01
SEC22A-207ENST00000481965 GEMIN2O14893 280 aaKnown RBP2.47□□□□□ -2.01
SEC22A-207ENST00000481965 FABP4P15090 132 aa2.47□□□□□ -2.01
SEC22A-207ENST00000481965 DIAPH2-AS1Q14236 149 aa2.47□□□□□ -2.01
SEC22A-207ENST00000481965 DEFB136Q30KP8 78 aa2.47□□□□□ -2.01
SEC22A-207ENST00000481965 PIGYQ3MUY2 71 aa2.47□□□□□ -2.01
SEC22A-207ENST00000481965 SBSPONQ8IVN8 264 aa2.47□□□□□ -2.01
SEC22A-207ENST00000481965 OR10AC1Q8NH08 325 aa2.47□□□□□ -2.01
SEC22A-207ENST00000481965 ERG28Q9UKR5 140 aa2.47□□□□□ -2.01
SEC22A-207ENST00000481965 TPRKBQ9Y3C4 175 aa2.47□□□□□ -2.01
SEC22A-207ENST00000481965 TNCP24821 2201 aa2.46□□□□□ -2.01
SEC22A-207ENST00000481965 LCE6AA0A183 80 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 LOC100130705A0A1B0GUX0 176 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 hDV103S1A0JD37 113 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 ZNF736B4DX44 427 aaPredicted RBP2.46□□□□□ -2.02
SEC22A-207ENST00000481965 G3V318 75 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 H3BUA1 57 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 K7ERU9 68 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 HBDP02042 147 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 TCRAP04437 139 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 TPPP2P59282 170 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 ROMO1P60602 79 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 QRFPP83859 136 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 UNQ5815/PRO19632Q6UWF5 114 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 GLIPR1L1Q6UWM5 242 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 C15orf53Q8NAA6 179 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 TMEM254Q8TBM7 123 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 MYOZ3Q8TDC0 251 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 USMG5Q96IX5 58 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 HYLS1Q96M11 299 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 NABP2Q9BQ15 211 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 LPAR5Q9H1C0 372 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 NIT2Q9NQR4 276 aa2.46□□□□□ -2.02
SEC22A-207ENST00000481965 PRKDCP78527 4128 aaKnown RBP2.46□□□□□ -2.02
SEC22A-207ENST00000481965 C2orf70A6NJV1 201 aa2.45□□□□□ -2.02
SEC22A-207ENST00000481965 NDUFA3O95167 84 aa2.45□□□□□ -2.02
SEC22A-207ENST00000481965 NCR2O95944 276 aa2.45□□□□□ -2.02
SEC22A-207ENST00000481965 IGLV1-51P01701 117 aa2.45□□□□□ -2.02
SEC22A-207ENST00000481965 SAA1P0DJI8 122 aaPredicted RBP2.45□□□□□ -2.02
SEC22A-207ENST00000481965 RPS25P62851 125 aaKnown RBP2.45□□□□□ -2.02
SEC22A-207ENST00000481965 FXYD3Q14802 87 aa2.45□□□□□ -2.02
SEC22A-207ENST00000481965 ZNF833PQ6ZTB9 187 aa2.45□□□□□ -2.02
SEC22A-207ENST00000481965 Q8N814 137 aa2.45□□□□□ -2.02
SEC22A-207ENST00000481965 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.45□□□□□ -2.02
SEC22A-207ENST00000481965 TP53RKQ96S44 253 aa2.45□□□□□ -2.02
SEC22A-207ENST00000481965 METTL1Q9UBP6 276 aaKnown RBP2.45□□□□□ -2.02
SEC22A-207ENST00000481965 TENM2Q9NT68 2774 aa2.44□□□□□ -2.02
SEC22A-207ENST00000481965 IGKV2D-26A0A0A0MRZ7 120 aa2.44□□□□□ -2.02
SEC22A-207ENST00000481965 F8W036 122 aa2.44□□□□□ -2.02
SEC22A-207ENST00000481965 SLC25A5P05141 298 aaKnown RBP2.44□□□□□ -2.02
SEC22A-207ENST00000481965 SAA2P0DJI9 122 aaPredicted RBP2.44□□□□□ -2.02
SEC22A-207ENST00000481965 RNASE3P12724 160 aaKnown RBP2.44□□□□□ -2.02
SEC22A-207ENST00000481965 HIST1H1BP16401 226 aaKnown RBP2.44□□□□□ -2.02
SEC22A-207ENST00000481965 TNFSF18Q9UNG2 199 aa2.44□□□□□ -2.02
SEC22A-207ENST00000481965 TRAV12-1A0A0B4J245 112 aa2.43□□□□□ -2.02
SEC22A-207ENST00000481965 A0A1B0GV90 55 aa2.43□□□□□ -2.02
SEC22A-207ENST00000481965 FAM223BA6NKX1 122 aa2.43□□□□□ -2.02
SEC22A-207ENST00000481965 ZNF727A8MUV8 499 aa2.43□□□□□ -2.02
SEC22A-207ENST00000481965 IGLC6P0CF74 106 aa2.43□□□□□ -2.02
SEC22A-207ENST00000481965 AKR1D1P51857 326 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms