RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 IGLV1-51P01701 117 aa7.65□□□□□ -1.18
VPS52-217ENST00000478934 TRAV4A0A0B4J268 109 aa7.65□□□□□ -1.18
VPS52-217ENST00000478934 SMIM1B2RUZ4 78 aa7.65□□□□□ -1.18
VPS52-217ENST00000478934 RNASE1P07998 156 aaKnown RBP7.65□□□□□ -1.18
VPS52-217ENST00000478934 CSNK1G2-AS1Q8NCQ2 148 aa7.65□□□□□ -1.18
VPS52-217ENST00000478934 TRRAPQ9Y4A5 3859 aa7.65□□□□□ -1.19
VPS52-217ENST00000478934 IGLV5-45A0A087WSX0 123 aa7.65□□□□□ -1.19
VPS52-217ENST00000478934 TRBV10-2A0A0K0K1G8 114 aa7.65□□□□□ -1.19
VPS52-217ENST00000478934 NDUFA1O15239 70 aa7.65□□□□□ -1.19
VPS52-217ENST00000478934 TIRAPP58753 221 aa7.65□□□□□ -1.19
VPS52-217ENST00000478934 MEIG1Q5JSS6 88 aa7.65□□□□□ -1.19
VPS52-217ENST00000478934 LINC00308Q8TCZ7 52 aa7.65□□□□□ -1.19
VPS52-217ENST00000478934 CDC42SE2Q9NRR3 84 aa7.65□□□□□ -1.19
VPS52-217ENST00000478934 GAGE6Q13070 117 aa7.64□□□□□ -1.19
VPS52-217ENST00000478934 PRIMA1Q86XR5 153 aa7.64□□□□□ -1.19
VPS52-217ENST00000478934 TRAV26-1A0A087WT03 109 aa7.64□□□□□ -1.19
VPS52-217ENST00000478934 UBE2WQ96B02 151 aa7.63□□□□□ -1.19
VPS52-217ENST00000478934 TOMM7Q9P0U1 55 aa7.63□□□□□ -1.19
VPS52-217ENST00000478934 IGLV5-39A0A0G2JS06 123 aa7.63□□□□□ -1.19
VPS52-217ENST00000478934 DEFB130BP0DP73 79 aa7.63□□□□□ -1.19
VPS52-217ENST00000478934 DEFB130AP0DP74 79 aa7.63□□□□□ -1.19
VPS52-217ENST00000478934 DAZ2Q13117 558 aaKnown RBP7.63□□□□□ -1.19
VPS52-217ENST00000478934 DAZ4Q86SG3 579 aaKnown RBP7.63□□□□□ -1.19
VPS52-217ENST00000478934 RNF183Q96D59 192 aa7.63□□□□□ -1.19
VPS52-217ENST00000478934 C16orf95Q9H693 158 aa7.63□□□□□ -1.19
VPS52-217ENST00000478934 DAZ3Q9NR90 486 aaKnown RBP7.63□□□□□ -1.19
VPS52-217ENST00000478934 IGLV4-60A0A075B6I1 120 aa7.62□□□□□ -1.19
VPS52-217ENST00000478934 TRGV4A0A0C4DH28 118 aa7.62□□□□□ -1.19
VPS52-217ENST00000478934 F5H768 121 aa7.62□□□□□ -1.19
VPS52-217ENST00000478934 COX6CP09669 75 aa7.62□□□□□ -1.19
VPS52-217ENST00000478934 HERVK_113P63121 156 aa7.62□□□□□ -1.19
VPS52-217ENST00000478934 TRBV10-1A0A0K0K1A3 114 aa7.62□□□□□ -1.19
VPS52-217ENST00000478934 TTC32Q5I0X7 151 aa7.62□□□□□ -1.19
VPS52-217ENST00000478934 TRAV8-4A0A0B4J246 113 aa7.61□□□□□ -1.19
VPS52-217ENST00000478934 UBE2L6O14933 153 aa7.61□□□□□ -1.19
VPS52-217ENST00000478934 CIRBPQ14011 172 aaKnown RBP7.61□□□□□ -1.19
VPS52-217ENST00000478934 C16orf74Q96GX8 76 aa7.61□□□□□ -1.19
VPS52-217ENST00000478934 KMT2BQ9UMN6 2715 aaPredicted RBP7.61□□□□□ -1.19
VPS52-217ENST00000478934 LST1O00453 97 aa7.61□□□□□ -1.19
VPS52-217ENST00000478934 FHL2Q14192 279 aa7.61□□□□□ -1.19
VPS52-217ENST00000478934 TMEM243Q9BU79 118 aa7.61□□□□□ -1.19
VPS52-217ENST00000478934 ATRQ13535 2644 aa7.6□□□□□ -1.19
VPS52-217ENST00000478934 C11orf68Q9H3H3 251 aaKnown RBP7.6□□□□□ -1.19
VPS52-217ENST00000478934 A0A096LPF7 62 aa7.6□□□□□ -1.19
VPS52-217ENST00000478934 TMEM262E9PQX1 116 aa7.6□□□□□ -1.19
VPS52-217ENST00000478934 HILS1P60008 231 aa7.6□□□□□ -1.19
VPS52-217ENST00000478934 TEX29Q8N6K0 151 aa7.6□□□□□ -1.19
VPS52-217ENST00000478934 SNCGO76070 127 aa7.59□□□□□ -1.19
VPS52-217ENST00000478934 LINC00482Q8N8I6 264 aa7.59□□□□□ -1.19
VPS52-217ENST00000478934 DEFB4AO15263 64 aa7.59□□□□□ -1.19
VPS52-217ENST00000478934 C15orf53Q8NAA6 179 aa7.59□□□□□ -1.19
VPS52-217ENST00000478934 ANAPC13Q9BS18 74 aa7.59□□□□□ -1.19
VPS52-217ENST00000478934 CSDC2Q9Y534 153 aaKnown RBP7.59□□□□□ -1.19
VPS52-217ENST00000478934 TIMM17BO60830 172 aa7.58□□□□□ -1.2
VPS52-217ENST00000478934 IFITM1P13164 125 aa7.58□□□□□ -1.2
VPS52-217ENST00000478934 CITED1Q99966 193 aa7.58□□□□□ -1.2
VPS52-217ENST00000478934 CHCHD5Q9BSY4 110 aa7.58□□□□□ -1.2
VPS52-217ENST00000478934 OVOL2Q9BRP0 275 aa7.58□□□□□ -1.2
VPS52-217ENST00000478934 NSD1Q96L73 2696 aaPredicted RBP7.57□□□□□ -1.2
VPS52-217ENST00000478934 TRBV6-4A0A1B0GX49 114 aa7.57□□□□□ -1.2
VPS52-217ENST00000478934 CLPSL2Q6UWE3 100 aa7.57□□□□□ -1.2
VPS52-217ENST00000478934 FAM218AQ96MZ4 157 aa7.57□□□□□ -1.2
VPS52-217ENST00000478934 J3QKU1 62 aa7.57□□□□□ -1.2
VPS52-217ENST00000478934 M0QXV9 152 aa7.57□□□□□ -1.2
VPS52-217ENST00000478934 FAM19A3Q7Z5A8 133 aa7.57□□□□□ -1.2
VPS52-217ENST00000478934 C5orf38Q86SI9 138 aa7.57□□□□□ -1.2
VPS52-217ENST00000478934 Q9HAA7 133 aa7.57□□□□□ -1.2
VPS52-217ENST00000478934 TRBV6-8A0A0A6YYG3 113 aa7.56□□□□□ -1.2
VPS52-217ENST00000478934 PF4P02776 101 aa7.56□□□□□ -1.2
VPS52-217ENST00000478934 GAGE2BQ13066 116 aa7.56□□□□□ -1.2
VPS52-217ENST00000478934 GAGE2EQ4V326 116 aa7.56□□□□□ -1.2
VPS52-217ENST00000478934 MIR7-3HGQ8N6C7 128 aa7.56□□□□□ -1.2
VPS52-217ENST00000478934 GAGE2DQ9UEU5 116 aa7.56□□□□□ -1.2
VPS52-217ENST00000478934 PFN2P35080 140 aa7.56□□□□□ -1.2
VPS52-217ENST00000478934 HIVEP1P15822 2718 aa7.55□□□□□ -1.2
VPS52-217ENST00000478934 LY6G6DO95868 133 aa7.55□□□□□ -1.2
VPS52-217ENST00000478934 H3BT86 120 aa7.55□□□□□ -1.2
VPS52-217ENST00000478934 NHLRC4P0CG21 123 aaPredicted RBP7.55□□□□□ -1.2
VPS52-217ENST00000478934 CMC4P56277 68 aaPredicted RBP7.54□□□□□ -1.2
VPS52-217ENST00000478934 Q8N3U1 123 aa7.54□□□□□ -1.2
VPS52-217ENST00000478934 COX7A2LO14548 114 aa7.54□□□□□ -1.2
VPS52-217ENST00000478934 GYPEP15421 78 aa7.54□□□□□ -1.2
VPS52-217ENST00000478934 LINC00158P58513 81 aa7.54□□□□□ -1.2
VPS52-217ENST00000478934 LINC00337Q8N6G1 96 aa7.54□□□□□ -1.2
VPS52-217ENST00000478934 COX7B2Q8TF08 81 aa7.54□□□□□ -1.2
VPS52-217ENST00000478934 SHISA2Q6UWI4 295 aa7.53□□□□□ -1.2
VPS52-217ENST00000478934 FAM110AQ9BQ89 295 aa7.53□□□□□ -1.2
VPS52-217ENST00000478934 X6R8D5 127 aa7.53□□□□□ -1.2
VPS52-217ENST00000478934 IGKV2-28A0A075B6P5 120 aa7.52□□□□□ -1.21
VPS52-217ENST00000478934 IGHV3OR16-9A0A0B4J2B5 98 aa7.52□□□□□ -1.21
VPS52-217ENST00000478934 IGKV2D-28P01615 120 aa7.52□□□□□ -1.21
VPS52-217ENST00000478934 NDUFV3P56181 108 aaKnown RBP7.52□□□□□ -1.21
VPS52-217ENST00000478934 TEP1Q99973 2627 aaKnown RBP7.52□□□□□ -1.21
VPS52-217ENST00000478934 INAFM1C9JVW0 142 aa7.52□□□□□ -1.21
VPS52-217ENST00000478934 XCL1P47992 114 aa7.52□□□□□ -1.21
VPS52-217ENST00000478934 B5MCH6 92 aa7.51□□□□□ -1.21
VPS52-217ENST00000478934 SND1-IT1Q9HBX3 110 aa7.51□□□□□ -1.21
VPS52-217ENST00000478934 CCDC179H3BU77 68 aa7.51□□□□□ -1.21
VPS52-217ENST00000478934 ATP5G1P05496 136 aa7.51□□□□□ -1.21
VPS52-217ENST00000478934 DEFB135Q30KP9 77 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms