RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 SPRR1BP22528 89 aa-0.54□□□□□ -2.5
CLCC1-208ENST00000473062 KRTAP20-2Q3LI61 65 aa-0.54□□□□□ -2.5
CLCC1-208ENST00000473062 MRPL54Q6P161 138 aaKnown RBP-0.54□□□□□ -2.5
CLCC1-208ENST00000473062 COMMD6Q7Z4G1 85 aa-0.54□□□□□ -2.5
CLCC1-208ENST00000473062 DEFB123Q8N688 67 aa-0.54□□□□□ -2.5
CLCC1-208ENST00000473062 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.54□□□□□ -2.5
CLCC1-208ENST00000473062 POLA1P09884 1462 aaPredicted RBP-0.54□□□□□ -2.5
CLCC1-208ENST00000473062 MIF4GDA9UHW6 222 aaKnown RBP-0.55□□□□□ -2.5
CLCC1-208ENST00000473062 C5orf38Q86SI9 138 aa-0.55□□□□□ -2.5
CLCC1-208ENST00000473062 TMEM263Q8WUH6 116 aaKnown RBP-0.55□□□□□ -2.5
CLCC1-208ENST00000473062 DNAJC13O75165 2243 aa-0.55□□□□□ -2.5
CLCC1-208ENST00000473062 ARAP2Q8WZ64 1704 aa-0.55□□□□□ -2.5
CLCC1-208ENST00000473062 EPG5Q9HCE0 2579 aa-0.55□□□□□ -2.5
CLCC1-208ENST00000473062 CPSF1Q10570 1443 aaKnown RBP-0.55□□□□□ -2.5
CLCC1-208ENST00000473062 NBPF19A0A087WUL8 3843 aa-0.56□□□□□ -2.5
CLCC1-208ENST00000473062 GNG7O60262 68 aa-0.56□□□□□ -2.5
CLCC1-208ENST00000473062 PCNX1Q96RV3 2341 aa-0.56□□□□□ -2.5
CLCC1-208ENST00000473062 KTN1Q86UP2 1357 aaKnown RBP-0.57□□□□□ -2.5
CLCC1-208ENST00000473062 PKD1P98161 4303 aa-0.57□□□□□ -2.5
CLCC1-208ENST00000473062 DOPEY1Q5JWR5 2465 aa-0.57□□□□□ -2.5
CLCC1-208ENST00000473062 CATR1Q13166 79 aa-0.57□□□□□ -2.5
CLCC1-208ENST00000473062 KLK9Q2XQG4 91 aa-0.57□□□□□ -2.5
CLCC1-208ENST00000473062 LAMC1P11047 1609 aa-0.57□□□□□ -2.5
CLCC1-208ENST00000473062 PAPPAQ13219 1627 aa-0.57□□□□□ -2.5
CLCC1-208ENST00000473062 SBF2Q86WG5 1849 aa-0.58□□□□□ -2.5
CLCC1-208ENST00000473062 TRBV7-4A0A0J9YYF1 115 aa-0.58□□□□□ -2.5
CLCC1-208ENST00000473062 SYS1-DBNDD2H3BUS1 97 aa-0.58□□□□□ -2.5
CLCC1-208ENST00000473062 NXT2Q9NPJ8 142 aaKnown RBP-0.58□□□□□ -2.5
CLCC1-208ENST00000473062 RAPGEF6Q8TEU7 1601 aa-0.58□□□□□ -2.5
CLCC1-208ENST00000473062 DNAH9Q9NYC9 4486 aa-0.58□□□□□ -2.5
CLCC1-208ENST00000473062 SVEP1Q4LDE5 3571 aa-0.58□□□□□ -2.5
CLCC1-208ENST00000473062 PATJQ8NI35 1801 aa-0.59□□□□□ -2.5
CLCC1-208ENST00000473062 GAPVD1Q14C86 1478 aa-0.59□□□□□ -2.5
CLCC1-208ENST00000473062 IQSEC2Q5JU85 1478 aa-0.59□□□□□ -2.5
CLCC1-208ENST00000473062 EPPK1P58107 5090 aaKnown RBP-0.59□□□□□ -2.5
CLCC1-208ENST00000473062 NDUFA2O43678 99 aa-0.59□□□□□ -2.5
CLCC1-208ENST00000473062 SPRR2AP35326 72 aa-0.59□□□□□ -2.5
CLCC1-208ENST00000473062 DEFB105AQ8NG35 78 aa-0.59□□□□□ -2.5
CLCC1-208ENST00000473062 KIF21AQ7Z4S6 1674 aa-0.59□□□□□ -2.5
CLCC1-208ENST00000473062 DOCK2Q92608 1830 aa-0.59□□□□□ -2.5
CLCC1-208ENST00000473062 PKHD1L1Q86WI1 4243 aa-0.6□□□□□ -2.51
CLCC1-208ENST00000473062 MUC17Q685J3 4493 aa-0.6□□□□□ -2.51
CLCC1-208ENST00000473062 CHKB-CPT1BH3BT56 60 aa-0.6□□□□□ -2.51
CLCC1-208ENST00000473062 K7EP13 123 aa-0.6□□□□□ -2.51
CLCC1-208ENST00000473062 AKAIN1P0CW23 69 aa-0.6□□□□□ -2.51
CLCC1-208ENST00000473062 COX8AP10176 69 aa-0.6□□□□□ -2.51
CLCC1-208ENST00000473062 MT4P47944 62 aa-0.6□□□□□ -2.51
CLCC1-208ENST00000473062 ATP5EP56381 51 aaPredicted RBP-0.6□□□□□ -2.51
CLCC1-208ENST00000473062 UBA52P62987 128 aaKnown RBP-0.6□□□□□ -2.51
CLCC1-208ENST00000473062 KRTAP6-2Q3LI66 62 aa-0.6□□□□□ -2.51
CLCC1-208ENST00000473062 TSLPQ969D9 159 aa-0.6□□□□□ -2.51
CLCC1-208ENST00000473062 RIMS1Q86UR5 1692 aaKnown RBP-0.6□□□□□ -2.51
CLCC1-208ENST00000473062 USP9YO00507 2555 aaPredicted RBP-0.6□□□□□ -2.51
CLCC1-208ENST00000473062 UBE2L5PA0A1B0GUS4 154 aa-0.61□□□□□ -2.51
CLCC1-208ENST00000473062 HMGN1P05114 100 aa-0.61□□□□□ -2.51
CLCC1-208ENST00000473062 UBE2L3P68036 154 aaKnown RBP-0.61□□□□□ -2.51
CLCC1-208ENST00000473062 DEFB135Q30KP9 77 aa-0.61□□□□□ -2.51
CLCC1-208ENST00000473062 USMG5Q96IX5 58 aa-0.61□□□□□ -2.51
CLCC1-208ENST00000473062 RYR1P21817 5038 aa-0.61□□□□□ -2.51
CLCC1-208ENST00000473062 F6UZH7 168 aa-0.62□□□□□ -2.51
CLCC1-208ENST00000473062 PRO1933Q9H354 126 aa-0.62□□□□□ -2.51
CLCC1-208ENST00000473062 VPS13DQ5THJ4 4388 aa-0.62□□□□□ -2.51
CLCC1-208ENST00000473062 BICRAQ9NZM4 1560 aa-0.62□□□□□ -2.51
CLCC1-208ENST00000473062 DNAH3Q8TD57 4116 aa-0.62□□□□□ -2.51
CLCC1-208ENST00000473062 DOCK1Q14185 1865 aa-0.63□□□□□ -2.51
CLCC1-208ENST00000473062 IGLC1P0CG04 106 aa-0.63□□□□□ -2.51
CLCC1-208ENST00000473062 SPRR2EP22531 72 aa-0.63□□□□□ -2.51
CLCC1-208ENST00000473062 FDCSPQ8NFU4 85 aa-0.63□□□□□ -2.51
CLCC1-208ENST00000473062 SPRR4Q96PI1 79 aa-0.63□□□□□ -2.51
CLCC1-208ENST00000473062 APLNQ9ULZ1 77 aa-0.63□□□□□ -2.51
CLCC1-208ENST00000473062 RYR3Q15413 4870 aa-0.63□□□□□ -2.51
CLCC1-208ENST00000473062 HIVEP1P15822 2718 aa-0.63□□□□□ -2.51
CLCC1-208ENST00000473062 SMG6Q86US8 1419 aaKnown RBP-0.64□□□□□ -2.51
CLCC1-208ENST00000473062 FAT3Q8TDW7 4589 aa-0.64□□□□□ -2.51
CLCC1-208ENST00000473062 TSC2P49815 1807 aa-0.64□□□□□ -2.51
CLCC1-208ENST00000473062 ZNF236Q9UL36 1845 aa-0.64□□□□□ -2.51
CLCC1-208ENST00000473062 SPG11Q96JI7 2443 aa-0.64□□□□□ -2.51
CLCC1-208ENST00000473062 SETBP1Q9Y6X0 1596 aa-0.64□□□□□ -2.51
CLCC1-208ENST00000473062 FAM24AA6NFZ4 105 aa-0.64□□□□□ -2.51
CLCC1-208ENST00000473062 C10orf113Q5VZT2 155 aa-0.64□□□□□ -2.51
CLCC1-208ENST00000473062 PP6455Q8WZ26 134 aa-0.64□□□□□ -2.51
CLCC1-208ENST00000473062 CDC42SE2Q9NRR3 84 aa-0.64□□□□□ -2.51
CLCC1-208ENST00000473062 BIRC6Q9NR09 4857 aa-0.64□□□□□ -2.51
CLCC1-208ENST00000473062 ARHGEF12Q9NZN5 1544 aa-0.64□□□□□ -2.51
CLCC1-208ENST00000473062 ITPR3Q14573 2671 aa-0.65□□□□□ -2.51
CLCC1-208ENST00000473062 AKAP9Q99996 3911 aa-0.65□□□□□ -2.51
CLCC1-208ENST00000473062 COX6CP09669 75 aa-0.65□□□□□ -2.51
CLCC1-208ENST00000473062 DEFB112Q30KQ8 113 aa-0.65□□□□□ -2.51
CLCC1-208ENST00000473062 FAM167A-AS1Q96KT0 104 aa-0.65□□□□□ -2.51
CLCC1-208ENST00000473062 FAM107BQ9H098 131 aa-0.65□□□□□ -2.51
CLCC1-208ENST00000473062 ARL2-SNX15V9GYD0 113 aa-0.65□□□□□ -2.51
CLCC1-208ENST00000473062 NSD3Q9BZ95 1437 aa-0.65□□□□□ -2.51
CLCC1-208ENST00000473062 SPTBN4Q9H254 2564 aa-0.65□□□□□ -2.51
CLCC1-208ENST00000473062 FASNP49327 2511 aaKnown RBP-0.66□□□□□ -2.51
CLCC1-208ENST00000473062 TACC2O95359 2948 aa-0.66□□□□□ -2.51
CLCC1-208ENST00000473062 CPSF4LA6NMK7 179 aaKnown RBP-0.66□□□□□ -2.52
CLCC1-208ENST00000473062 C9orf153Q5TBE3 101 aa-0.66□□□□□ -2.52
CLCC1-208ENST00000473062 HECTD1Q9ULT8 2610 aa-0.66□□□□□ -2.52
CLCC1-208ENST00000473062 KIAA1109Q2LD37 5005 aa-0.67□□□□□ -2.52
CLCC1-208ENST00000473062 GNG11P61952 73 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms