RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ERASQ7Z444 233 aa9.04□□□□□ -0.96
HMGN1-211ENST00000471260 PCP2Q8IVA1 136 aa9.04□□□□□ -0.96
HMGN1-211ENST00000471260 C14orf178Q8N769 122 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-211ENST00000471260 TM2D2Q9BX73 214 aa9.04□□□□□ -0.96
HMGN1-211ENST00000471260 KIF25-AS1Q9Y6Z4 181 aa9.04□□□□□ -0.96
HMGN1-211ENST00000471260 TRBV25-1A0A075B6N4 114 aa9.03□□□□□ -0.96
HMGN1-211ENST00000471260 TRAV8-3A0A0A6YYJ7 113 aa9.03□□□□□ -0.96
HMGN1-211ENST00000471260 TRAV26-2A0A0B4J265 109 aa9.03□□□□□ -0.96
HMGN1-211ENST00000471260 TRBV10-1A0A0K0K1A3 114 aa9.03□□□□□ -0.96
HMGN1-211ENST00000471260 IGHV3-30P01768 117 aa9.03□□□□□ -0.96
HMGN1-211ENST00000471260 IGHV3-33P01772 117 aa9.03□□□□□ -0.96
HMGN1-211ENST00000471260 IGHV3-30-3P0DP02 117 aa9.03□□□□□ -0.96
HMGN1-211ENST00000471260 IGHV3-30-5P0DP03 117 aa9.03□□□□□ -0.96
HMGN1-211ENST00000471260 AMMECR1LQ6DCA0 310 aa9.03□□□□□ -0.96
HMGN1-211ENST00000471260 Q6ZVH6 145 aa9.03□□□□□ -0.96
HMGN1-211ENST00000471260 NEXN-AS1Q8NBZ9 246 aa9.03□□□□□ -0.96
HMGN1-211ENST00000471260 SCGB3A1Q96QR1 104 aa9.03□□□□□ -0.96
HMGN1-211ENST00000471260 CYSLTR1Q9Y271 337 aa9.03□□□□□ -0.96
HMGN1-211ENST00000471260 CHTOPQ9Y3Y2 248 aaKnown RBP9.03□□□□□ -0.96
HMGN1-211ENST00000471260 GAGE10A6NGK3 116 aa9.02□□□□□ -0.97
HMGN1-211ENST00000471260 K7ERU9 68 aa9.02□□□□□ -0.97
HMGN1-211ENST00000471260 MGPP08493 103 aa9.02□□□□□ -0.97
HMGN1-211ENST00000471260 SMIM13P0DJ93 91 aa9.02□□□□□ -0.97
HMGN1-211ENST00000471260 GCSHP23434 173 aa9.02□□□□□ -0.97
HMGN1-211ENST00000471260 FAM74A4Q5TZK3 123 aa9.02□□□□□ -0.97
HMGN1-211ENST00000471260 C2orf66Q6UXQ4 117 aa9.02□□□□□ -0.97
HMGN1-211ENST00000471260 TMEM141Q96I45 108 aa9.02□□□□□ -0.97
HMGN1-211ENST00000471260 TIMM17AQ99595 171 aa9.02□□□□□ -0.97
HMGN1-211ENST00000471260 Q9HAA7 133 aa9.02□□□□□ -0.97
HMGN1-211ENST00000471260 ABCA13Q86UQ4 5058 aa9.02□□□□□ -0.97
HMGN1-211ENST00000471260 IGKV2D-26A0A0A0MRZ7 120 aa9.01□□□□□ -0.97
HMGN1-211ENST00000471260 A0A1W2PPM0 123 aa9.01□□□□□ -0.97
HMGN1-211ENST00000471260 E9PLD3 99 aa9.01□□□□□ -0.97
HMGN1-211ENST00000471260 FABP2P12104 132 aa9.01□□□□□ -0.97
HMGN1-211ENST00000471260 FUSP35637 526 aaKnown RBP eCLIP9.01□□□□□ -0.97
HMGN1-211ENST00000471260 XGP55808 180 aa9.01□□□□□ -0.97
HMGN1-211ENST00000471260 CEND1Q8N111 149 aa9.01□□□□□ -0.97
HMGN1-211ENST00000471260 KIR2DL4Q99706 377 aa9.01□□□□□ -0.97
HMGN1-211ENST00000471260 CST9LQ9H4G1 147 aa9.01□□□□□ -0.97
HMGN1-211ENST00000471260 Q9UF83 564 aa9.01□□□□□ -0.97
HMGN1-211ENST00000471260 TRBV7-3A0A075B6L6 115 aa9□□□□□ -0.97
HMGN1-211ENST00000471260 A0A087WWL8 130 aa9□□□□□ -0.97
HMGN1-211ENST00000471260 VCYO14598 125 aa9□□□□□ -0.97
HMGN1-211ENST00000471260 KRTAP10-1P60331 282 aa9□□□□□ -0.97
HMGN1-211ENST00000471260 HERVK_113P61574 105 aa9□□□□□ -0.97
HMGN1-211ENST00000471260 RBX1P62877 108 aa9□□□□□ -0.97
HMGN1-211ENST00000471260 RPL36AP83881 106 aaKnown RBP9□□□□□ -0.97
HMGN1-211ENST00000471260 Q8N814 137 aa9□□□□□ -0.97
HMGN1-211ENST00000471260 BAALCQ8WXS3 180 aa9□□□□□ -0.97
HMGN1-211ENST00000471260 RPL36ALQ969Q0 106 aaKnown RBP9□□□□□ -0.97
HMGN1-211ENST00000471260 CHCHD7Q9BUK0 85 aa9□□□□□ -0.97
HMGN1-211ENST00000471260 IGLV5-52A0A0A0MRZ9 124 aa8.99□□□□□ -0.97
HMGN1-211ENST00000471260 TRBV27A0A0K0K1C4 114 aa8.99□□□□□ -0.97
HMGN1-211ENST00000471260 EPM2AB3EWF7 344 aa8.99□□□□□ -0.97
HMGN1-211ENST00000471260 POLR2KP53803 58 aaKnown RBP8.99□□□□□ -0.97
HMGN1-211ENST00000471260 RPL39LQ96EH5 51 aaKnown RBP8.99□□□□□ -0.97
HMGN1-211ENST00000471260 MYMXA0A1B0GTQ4 84 aa8.98□□□□□ -0.97
HMGN1-211ENST00000471260 TMEM238LA0A1B0GVL6 79 aa8.98□□□□□ -0.97
HMGN1-211ENST00000471260 A6NJY4 79 aa8.98□□□□□ -0.97
HMGN1-211ENST00000471260 H3BUT2 72 aa8.98□□□□□ -0.97
HMGN1-211ENST00000471260 SUMO4Q6EEV6 95 aa8.98□□□□□ -0.97
HMGN1-211ENST00000471260 RMI2Q96E14 147 aa8.98□□□□□ -0.97
HMGN1-211ENST00000471260 A0A1B0GWB2 263 aa8.97□□□□□ -0.97
HMGN1-211ENST00000471260 FXYD2P54710 66 aa8.97□□□□□ -0.97
HMGN1-211ENST00000471260 UBE2D3P61077 147 aa8.97□□□□□ -0.97
HMGN1-211ENST00000471260 UBE2D2P62837 147 aa8.97□□□□□ -0.97
HMGN1-211ENST00000471260 OCIAD2Q56VL3 154 aa8.97□□□□□ -0.97
HMGN1-211ENST00000471260 DAZ4Q86SG3 579 aaKnown RBP8.97□□□□□ -0.97
HMGN1-211ENST00000471260 DAZ3Q9NR90 486 aaKnown RBP8.97□□□□□ -0.97
HMGN1-211ENST00000471260 SPCS1Q9Y6A9 102 aa8.97□□□□□ -0.97
HMGN1-211ENST00000471260 PMVKQ15126 192 aa8.96□□□□□ -0.98
HMGN1-211ENST00000471260 Q8N3U1 123 aa8.96□□□□□ -0.98
HMGN1-211ENST00000471260 IGIPA6NJ69 53 aa8.95□□□□□ -0.98
HMGN1-211ENST00000471260 ZNF56Q15929 161 aa8.95□□□□□ -0.98
HMGN1-211ENST00000471260 TRBV6-8A0A0A6YYG3 113 aa8.94□□□□□ -0.98
HMGN1-211ENST00000471260 SDHAF1A6NFY7 115 aa8.94□□□□□ -0.98
HMGN1-211ENST00000471260 C11orf86A6NJI1 115 aa8.94□□□□□ -0.98
HMGN1-211ENST00000471260 LYRM7Q5U5X0 104 aa8.93□□□□□ -0.98
HMGN1-211ENST00000471260 HIST1H4GQ99525 98 aa8.93□□□□□ -0.98
HMGN1-211ENST00000471260 SPANXB1Q9NS25 103 aaPredicted RBP8.93□□□□□ -0.98
HMGN1-211ENST00000471260 NHP2Q9NX24 153 aaKnown RBP8.93□□□□□ -0.98
HMGN1-211ENST00000471260 KLK12Q9UKR0 248 aa8.93□□□□□ -0.98
HMGN1-211ENST00000471260 IGLV4-69A0A075B6H9 119 aa8.92□□□□□ -0.98
HMGN1-211ENST00000471260 F5H697 171 aa8.92□□□□□ -0.98
HMGN1-211ENST00000471260 M0QY20 66 aa8.92□□□□□ -0.98
HMGN1-211ENST00000471260 IGKV2D-24A0A075B6R9 120 aa8.91□□□□□ -0.98
HMGN1-211ENST00000471260 TMEM262E9PQX1 116 aa8.91□□□□□ -0.98
HMGN1-211ENST00000471260 FAM229AH3BQW9 127 aa8.91□□□□□ -0.98
HMGN1-211ENST00000471260 WFDC2Q14508 124 aa8.91□□□□□ -0.98
HMGN1-211ENST00000471260 Q5VSD8 79 aa8.91□□□□□ -0.98
HMGN1-211ENST00000471260 RAB37Q96AX2 223 aa8.91□□□□□ -0.98
HMGN1-211ENST00000471260 UBE2WQ96B02 151 aa8.91□□□□□ -0.98
HMGN1-211ENST00000471260 TTTY13Q9BZ97 58 aa8.91□□□□□ -0.98
HMGN1-211ENST00000471260 ZNF815PA8K554 130 aa8.9□□□□□ -0.98
HMGN1-211ENST00000471260 I3L3M4 83 aa8.9□□□□□ -0.98
HMGN1-211ENST00000471260 INAFM2P0DMQ5 153 aa8.9□□□□□ -0.98
HMGN1-211ENST00000471260 DNAJC30Q96LL9 226 aa8.9□□□□□ -0.98
HMGN1-211ENST00000471260 PYGO1Q9Y3Y4 419 aa8.9□□□□□ -0.98
HMGN1-211ENST00000471260 F8W1H4 67 aa8.89□□□□□ -0.99
HMGN1-211ENST00000471260 TSHBP01222 138 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms