RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 SPACA4Q8TDM5 124 aa5.02□□□□□ -1.61
BRCA1-210ENST00000471181 C18orf65Q6ZTR6 163 aa5.02□□□□□ -1.61
BRCA1-210ENST00000471181 Q8N6K4 173 aa5.02□□□□□ -1.61
BRCA1-210ENST00000471181 C8orf87E5RJ46 101 aa5.01□□□□□ -1.61
BRCA1-210ENST00000471181 PIP4P1Q86T03 277 aa5.01□□□□□ -1.61
BRCA1-210ENST00000471181 NLRC5Q86WI3 1866 aa5.01□□□□□ -1.61
BRCA1-210ENST00000471181 GREB1Q4ZG55 1949 aa5.01□□□□□ -1.61
BRCA1-210ENST00000471181 PHF3Q92576 2039 aaKnown RBP5.01□□□□□ -1.61
BRCA1-210ENST00000471181 C1orf134Q5TEV5 83 aa5.01□□□□□ -1.61
BRCA1-210ENST00000471181 GTF3C1Q12789 2109 aa5.01□□□□□ -1.61
BRCA1-210ENST00000471181 CEP350Q5VT06 3117 aa5.01□□□□□ -1.61
BRCA1-210ENST00000471181 DOCK3Q8IZD9 2030 aa5.01□□□□□ -1.61
BRCA1-210ENST00000471181 Q6ZTC4 211 aa5.01□□□□□ -1.61
BRCA1-210ENST00000471181 COL6A6A6NMZ7 2263 aa5□□□□□ -1.61
BRCA1-210ENST00000471181 MRGPRG-AS1Q2M3A8 158 aa5□□□□□ -1.61
BRCA1-210ENST00000471181 KIF26AQ9ULI4 1882 aaPredicted RBP5□□□□□ -1.61
BRCA1-210ENST00000471181 C6orf48Q9UBA6 75 aa5□□□□□ -1.61
BRCA1-210ENST00000471181 POLEQ07864 2286 aa5□□□□□ -1.61
BRCA1-210ENST00000471181 C19orf84I3L1E1 186 aa5□□□□□ -1.61
BRCA1-210ENST00000471181 EGFEM1PQ0D2K5 195 aa5□□□□□ -1.61
BRCA1-210ENST00000471181 OXLD1Q5BKU9 147 aa5□□□□□ -1.61
BRCA1-210ENST00000471181 U3KQK5 164 aa5□□□□□ -1.61
BRCA1-210ENST00000471181 ALPK2Q86TB3 2170 aa5□□□□□ -1.61
BRCA1-210ENST00000471181 KRTAP27-1Q3LI81 207 aa4.99□□□□□ -1.61
BRCA1-210ENST00000471181 SMIM29Q86T20 159 aa4.99□□□□□ -1.61
BRCA1-210ENST00000471181 MKI67P46013 3256 aaKnown RBP4.99□□□□□ -1.61
BRCA1-210ENST00000471181 BRI3O95415 125 aa4.99□□□□□ -1.61
BRCA1-210ENST00000471181 APLNQ9ULZ1 77 aa4.99□□□□□ -1.61
BRCA1-210ENST00000471181 CRIP1P50238 77 aa4.99□□□□□ -1.61
BRCA1-210ENST00000471181 COX6A2Q02221 97 aa4.99□□□□□ -1.61
BRCA1-210ENST00000471181 CDC42SE2Q9NRR3 84 aa4.98□□□□□ -1.61
BRCA1-210ENST00000471181 XIRP2A4UGR9 3374 aa4.98□□□□□ -1.61
BRCA1-210ENST00000471181 NBASA2RRP1 2371 aa4.98□□□□□ -1.61
BRCA1-210ENST00000471181 GPR179Q6PRD1 2367 aa4.98□□□□□ -1.61
BRCA1-210ENST00000471181 SCN10AQ9Y5Y9 1956 aa4.98□□□□□ -1.61
BRCA1-210ENST00000471181 CACNA1HO95180 2353 aa4.98□□□□□ -1.61
BRCA1-210ENST00000471181 FSTL3O95633 263 aa4.98□□□□□ -1.61
BRCA1-210ENST00000471181 FHL2Q14192 279 aa4.97□□□□□ -1.61
BRCA1-210ENST00000471181 LMO4P61968 165 aa4.97□□□□□ -1.61
BRCA1-210ENST00000471181 COL4A2P08572 1712 aa4.97□□□□□ -1.61
BRCA1-210ENST00000471181 PRR9Q5T870 116 aa4.97□□□□□ -1.61
BRCA1-210ENST00000471181 IGFL2Q6UWQ7 119 aa4.97□□□□□ -1.61
BRCA1-210ENST00000471181 C2orf91Q6ZV80 131 aa4.97□□□□□ -1.61
BRCA1-210ENST00000471181 MUC7Q8TAX7 377 aa4.97□□□□□ -1.61
BRCA1-210ENST00000471181 DOCK7Q96N67 2140 aa4.97□□□□□ -1.61
BRCA1-210ENST00000471181 PRO0628Q9UI54 55 aa4.97□□□□□ -1.61
BRCA1-210ENST00000471181 ZNF407Q9C0G0 2248 aa4.97□□□□□ -1.61
BRCA1-210ENST00000471181 SDK2Q58EX2 2172 aa4.96□□□□□ -1.61
BRCA1-210ENST00000471181 CDH23Q9H251 3354 aa4.96□□□□□ -1.61
BRCA1-210ENST00000471181 OBSL1O75147 1896 aa4.96□□□□□ -1.61
BRCA1-210ENST00000471181 KIAA1549LQ6ZVL6 1849 aa4.96□□□□□ -1.62
BRCA1-210ENST00000471181 A8MTW9 85 aa4.96□□□□□ -1.62
BRCA1-210ENST00000471181 SMCR5Q8TEV8 140 aa4.96□□□□□ -1.62
BRCA1-210ENST00000471181 NOTCH2Q04721 2471 aa4.95□□□□□ -1.62
BRCA1-210ENST00000471181 DSCAML1Q8TD84 2053 aa4.95□□□□□ -1.62
BRCA1-210ENST00000471181 COL4A3Q01955 1670 aa4.95□□□□□ -1.62
BRCA1-210ENST00000471181 CRIPTQ9P021 101 aa4.95□□□□□ -1.62
BRCA1-210ENST00000471181 CREBBPQ92793 2442 aa4.95□□□□□ -1.62
BRCA1-210ENST00000471181 COX6B2Q6YFQ2 88 aa4.95□□□□□ -1.62
BRCA1-210ENST00000471181 LINC01006Q8NI28 216 aa4.95□□□□□ -1.62
BRCA1-210ENST00000471181 MOBPQ13875 183 aa4.95□□□□□ -1.62
BRCA1-210ENST00000471181 TICRRQ7Z2Z1 1910 aa4.95□□□□□ -1.62
BRCA1-210ENST00000471181 USP34Q70CQ2 3546 aa4.95□□□□□ -1.62
BRCA1-210ENST00000471181 EYSQ5T1H1 3165 aa4.94□□□□□ -1.62
BRCA1-210ENST00000471181 P0C879 139 aa4.94□□□□□ -1.62
BRCA1-210ENST00000471181 LINC00242Q5T6M2 205 aa4.94□□□□□ -1.62
BRCA1-210ENST00000471181 CHD9Q3L8U1 2897 aa4.94□□□□□ -1.62
BRCA1-210ENST00000471181 ABCA1O95477 2261 aa4.94□□□□□ -1.62
BRCA1-210ENST00000471181 IGLV4-60A0A075B6I1 120 aa4.94□□□□□ -1.62
BRCA1-210ENST00000471181 GAS8-AS1O95177 125 aa4.94□□□□□ -1.62
BRCA1-210ENST00000471181 TRANK1O15050 2925 aa4.94□□□□□ -1.62
BRCA1-210ENST00000471181 C4orf26Q17RF5 130 aa4.94□□□□□ -1.62
BRCA1-210ENST00000471181 MDFIQ99750 246 aa4.94□□□□□ -1.62
BRCA1-210ENST00000471181 PLXNA3P51805 1871 aa4.94□□□□□ -1.62
BRCA1-210ENST00000471181 SMIM1B2RUZ4 78 aa4.93□□□□□ -1.62
BRCA1-210ENST00000471181 FNDC1Q4ZHG4 1894 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-210ENST00000471181 MED12Q93074 2177 aa4.93□□□□□ -1.62
BRCA1-210ENST00000471181 PSMG3-AS1Q96PY0 264 aa4.93□□□□□ -1.62
BRCA1-210ENST00000471181 PRORYQ9H606 182 aa4.93□□□□□ -1.62
BRCA1-210ENST00000471181 C11orf21Q9P2W6 132 aa4.93□□□□□ -1.62
BRCA1-210ENST00000471181 USF3Q68DE3 2245 aa4.93□□□□□ -1.62
BRCA1-210ENST00000471181 DENND4AQ7Z401 1863 aa4.93□□□□□ -1.62
BRCA1-210ENST00000471181 SZT2Q5T011 3432 aa4.93□□□□□ -1.62
BRCA1-210ENST00000471181 C1orf229Q6ZS94 237 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-210ENST00000471181 PLXNA4Q9HCM2 1894 aa4.92□□□□□ -1.62
BRCA1-210ENST00000471181 BDP1A6H8Y1 2624 aa4.92□□□□□ -1.62
BRCA1-210ENST00000471181 MUC6Q6W4X9 2439 aa4.92□□□□□ -1.62
BRCA1-210ENST00000471181 DOCK8Q8NF50 2099 aa4.92□□□□□ -1.62
BRCA1-210ENST00000471181 KIAA0087Q14695 138 aa4.91□□□□□ -1.62
BRCA1-210ENST00000471181 Q96NJ1 140 aa4.91□□□□□ -1.62
BRCA1-210ENST00000471181 PRUNE2Q8WUY3 3088 aa4.91□□□□□ -1.62
BRCA1-210ENST00000471181 TTC28Q96AY4 2481 aa4.91□□□□□ -1.62
BRCA1-210ENST00000471181 TP53AIP1Q9HCN2 124 aa4.91□□□□□ -1.62
BRCA1-210ENST00000471181 LINC00846Q9NV44 126 aa4.91□□□□□ -1.62
BRCA1-210ENST00000471181 C22orf24Q9Y442 160 aa4.91□□□□□ -1.62
BRCA1-210ENST00000471181 POLR2KP53803 58 aaKnown RBP4.91□□□□□ -1.62
BRCA1-210ENST00000471181 LINC00313P59037 77 aa4.91□□□□□ -1.62
BRCA1-210ENST00000471181 ADAMTSL4-AS1Q5T5F5 129 aa4.91□□□□□ -1.62
BRCA1-210ENST00000471181 J3QL48 77 aa4.91□□□□□ -1.62
BRCA1-210ENST00000471181 EDN2P20800 178 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms