RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 TRBV10-2A0A0K0K1G8 114 aa5.67□□□□□ -1.5
SMC4-212ENST00000470240 SMIM1B2RUZ4 78 aa5.67□□□□□ -1.5
SMC4-212ENST00000470240 H3BT86 120 aa5.67□□□□□ -1.5
SMC4-212ENST00000470240 LINC00694P0DN24 101 aa5.67□□□□□ -1.5
SMC4-212ENST00000470240 APOC4P55056 127 aa5.67□□□□□ -1.5
SMC4-212ENST00000470240 ANKRD29Q8N6D5 301 aa5.67□□□□□ -1.5
SMC4-212ENST00000470240 WFDC10AQ9H1F0 79 aa5.67□□□□□ -1.5
SMC4-212ENST00000470240 USP9YO00507 2555 aaPredicted RBP5.67□□□□□ -1.5
SMC4-212ENST00000470240 PTPN13Q12923 2485 aa5.66□□□□□ -1.5
SMC4-212ENST00000470240 TRBV6-8A0A0A6YYG3 113 aa5.66□□□□□ -1.5
SMC4-212ENST00000470240 PLAC8L1A1L4L8 177 aa5.66□□□□□ -1.5
SMC4-212ENST00000470240 TRIAP1O43715 76 aa5.66□□□□□ -1.5
SMC4-212ENST00000470240 GIG44P09565 113 aaPredicted RBP5.66□□□□□ -1.5
SMC4-212ENST00000470240 NPC2P61916 151 aa5.66□□□□□ -1.5
SMC4-212ENST00000470240 NTM-AS1Q6ZSK4 140 aa5.66□□□□□ -1.5
SMC4-212ENST00000470240 CSNK1G2-AS1Q8NCQ2 148 aa5.66□□□□□ -1.5
SMC4-212ENST00000470240 LINC00308Q8TCZ7 52 aa5.66□□□□□ -1.5
SMC4-212ENST00000470240 COX7B2Q8TF08 81 aa5.66□□□□□ -1.5
SMC4-212ENST00000470240 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
SMC4-212ENST00000470240 TRAV13-2A0A0B4J235 113 aa5.65□□□□□ -1.5
SMC4-212ENST00000470240 LYRM9A8MSI8 78 aa5.65□□□□□ -1.5
SMC4-212ENST00000470240 A8MZ25 164 aa5.65□□□□□ -1.5
SMC4-212ENST00000470240 CRLF1O75462 422 aa5.65□□□□□ -1.5
SMC4-212ENST00000470240 COX6A2Q02221 97 aa5.65□□□□□ -1.5
SMC4-212ENST00000470240 GAGE6Q13070 117 aa5.65□□□□□ -1.5
SMC4-212ENST00000470240 SS18Q15532 418 aa5.65□□□□□ -1.5
SMC4-212ENST00000470240 ADAMTSL4-AS1Q5T5F5 129 aa5.65□□□□□ -1.5
SMC4-212ENST00000470240 C2orf82Q6UX34 121 aa5.65□□□□□ -1.5
SMC4-212ENST00000470240 UBE2WQ96B02 151 aa5.65□□□□□ -1.5
SMC4-212ENST00000470240 IGKV3OR2-268A0A0C4DH90 116 aa5.64□□□□□ -1.51
SMC4-212ENST00000470240 CRPP02741 224 aa5.64□□□□□ -1.51
SMC4-212ENST00000470240 DEFB130BP0DP73 79 aa5.64□□□□□ -1.51
SMC4-212ENST00000470240 DEFB130AP0DP74 79 aa5.64□□□□□ -1.51
SMC4-212ENST00000470240 FHL2Q14192 279 aa5.64□□□□□ -1.51
SMC4-212ENST00000470240 FAM222AQ5U5X8 452 aa5.64□□□□□ -1.51
SMC4-212ENST00000470240 PRO0255Q9UI72 69 aa5.64□□□□□ -1.51
SMC4-212ENST00000470240 CFAP46Q8IYW2 2715 aa5.64□□□□□ -1.51
SMC4-212ENST00000470240 LRRK2Q5S007 2527 aa5.64□□□□□ -1.51
SMC4-212ENST00000470240 LOC100131303A0A0U1RQF7 123 aa5.63□□□□□ -1.51
SMC4-212ENST00000470240 A0A1B0GV72 72 aa5.63□□□□□ -1.51
SMC4-212ENST00000470240 F5H768 121 aa5.63□□□□□ -1.51
SMC4-212ENST00000470240 COX7A2LO14548 114 aa5.63□□□□□ -1.51
SMC4-212ENST00000470240 LY6G6DO95868 133 aa5.63□□□□□ -1.51
SMC4-212ENST00000470240 GYPEP15421 78 aa5.63□□□□□ -1.51
SMC4-212ENST00000470240 LINC00612Q8N6U2 182 aa5.63□□□□□ -1.51
SMC4-212ENST00000470240 ZNF625Q96I27 306 aaPredicted RBP5.63□□□□□ -1.51
SMC4-212ENST00000470240 LINC01600Q96MT4 127 aa5.63□□□□□ -1.51
SMC4-212ENST00000470240 TOMM7Q9P0U1 55 aa5.63□□□□□ -1.51
SMC4-212ENST00000470240 UBR5O95071 2799 aaPredicted RBP5.63□□□□□ -1.51
SMC4-212ENST00000470240 WNK1Q9H4A3 2382 aa5.62□□□□□ -1.51
SMC4-212ENST00000470240 TRAV8-4A0A0B4J246 113 aa5.62□□□□□ -1.51
SMC4-212ENST00000470240 LST1O00453 97 aa5.62□□□□□ -1.51
SMC4-212ENST00000470240 LINC00158P58513 81 aa5.62□□□□□ -1.51
SMC4-212ENST00000470240 LINC01561Q8N1V8 128 aa5.62□□□□□ -1.51
SMC4-212ENST00000470240 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.62□□□□□ -1.51
SMC4-212ENST00000470240 DAND5Q8N907 189 aa5.62□□□□□ -1.51
SMC4-212ENST00000470240 NTN5Q8WTR8 489 aaPredicted RBP5.62□□□□□ -1.51
SMC4-212ENST00000470240 CARD19Q96LW7 228 aa5.62□□□□□ -1.51
SMC4-212ENST00000470240 POLQO75417 2590 aa5.62□□□□□ -1.51
SMC4-212ENST00000470240 A0A087WZ39 114 aa5.61□□□□□ -1.51
SMC4-212ENST00000470240 A0A0U1RRA0 63 aa5.61□□□□□ -1.51
SMC4-212ENST00000470240 A0A1B0GUV1 79 aa5.61□□□□□ -1.51
SMC4-212ENST00000470240 IBA57-AS1B1ANH7 110 aa5.61□□□□□ -1.51
SMC4-212ENST00000470240 DAD1P61803 113 aa5.61□□□□□ -1.51
SMC4-212ENST00000470240 FLNCQ14315 2725 aa5.61□□□□□ -1.51
SMC4-212ENST00000470240 TRAV26-1A0A087WT03 109 aa5.6□□□□□ -1.51
SMC4-212ENST00000470240 SNCGO76070 127 aa5.6□□□□□ -1.51
SMC4-212ENST00000470240 MIFP14174 115 aa5.6□□□□□ -1.51
SMC4-212ENST00000470240 CXCL5P42830 114 aa5.6□□□□□ -1.51
SMC4-212ENST00000470240 C6orf226Q5I0X4 101 aa5.6□□□□□ -1.51
SMC4-212ENST00000470240 SND1-IT1Q9HBX3 110 aa5.6□□□□□ -1.51
SMC4-212ENST00000470240 IGHV3OR16-9A0A0B4J2B5 98 aa5.59□□□□□ -1.51
SMC4-212ENST00000470240 LINC00959A0A1B0GUT2 108 aa5.59□□□□□ -1.51
SMC4-212ENST00000470240 DNAL4O96015 105 aa5.59□□□□□ -1.51
SMC4-212ENST00000470240 TRACP01848 142 aa5.59□□□□□ -1.51
SMC4-212ENST00000470240 ATP5G1P05496 136 aa5.59□□□□□ -1.51
SMC4-212ENST00000470240 CFAP161Q6P656 301 aa5.59□□□□□ -1.51
SMC4-212ENST00000470240 Q8IZM0 81 aa5.59□□□□□ -1.51
SMC4-212ENST00000470240 MIR7-3HGQ8N6C7 128 aa5.59□□□□□ -1.51
SMC4-212ENST00000470240 CLEC2BQ92478 149 aa5.59□□□□□ -1.51
SMC4-212ENST00000470240 SMR3AQ99954 134 aa5.59□□□□□ -1.51
SMC4-212ENST00000470240 COL12A1Q99715 3063 aa5.58□□□□□ -1.52
SMC4-212ENST00000470240 ABCA12Q86UK0 2595 aa5.58□□□□□ -1.52
SMC4-212ENST00000470240 IGLV4-60A0A075B6I1 120 aa5.58□□□□□ -1.52
SMC4-212ENST00000470240 INAFM1C9JVW0 142 aa5.58□□□□□ -1.52
SMC4-212ENST00000470240 SPART-AS1P0CW21 52 aa5.58□□□□□ -1.52
SMC4-212ENST00000470240 CKS1BP61024 79 aa5.58□□□□□ -1.52
SMC4-212ENST00000470240 MRPL23Q16540 153 aaKnown RBP5.58□□□□□ -1.52
SMC4-212ENST00000470240 DEFB135Q30KP9 77 aa5.58□□□□□ -1.52
SMC4-212ENST00000470240 Q8N1X5 172 aa5.58□□□□□ -1.52
SMC4-212ENST00000470240 ZFYVE26Q68DK2 2539 aa5.58□□□□□ -1.52
SMC4-212ENST00000470240 UTP20O75691 2785 aaKnown RBP5.58□□□□□ -1.52
SMC4-212ENST00000470240 MYO9AB2RTY4 2548 aa5.57□□□□□ -1.52
SMC4-212ENST00000470240 FAM240AA0A1B0GVK7 77 aa5.57□□□□□ -1.52
SMC4-212ENST00000470240 H0YGX0 51 aa5.57□□□□□ -1.52
SMC4-212ENST00000470240 ACYP1P07311 99 aa5.57□□□□□ -1.52
SMC4-212ENST00000470240 INAFM2P0DMQ5 153 aa5.57□□□□□ -1.52
SMC4-212ENST00000470240 XCL1P47992 114 aa5.57□□□□□ -1.52
SMC4-212ENST00000470240 KRTAP10-3P60369 221 aa5.57□□□□□ -1.52
SMC4-212ENST00000470240 SOSTDC1Q6X4U4 206 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms