RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 C20orf203Q8NBC4 194 aa10.18□□□□□ -0.78
DDX56-208ENST00000467318 RPL39P62891 51 aaKnown RBP10.17□□□□□ -0.78
DDX56-208ENST00000467318 PYGO1Q9Y3Y4 419 aa10.17□□□□□ -0.78
DDX56-208ENST00000467318 PLECQ15149 4684 aaKnown RBP10.17□□□□□ -0.78
DDX56-208ENST00000467318 SRSF9Q13242 221 aaKnown RBP eCLIP10.16□□□□□ -0.78
DDX56-208ENST00000467318 SPANXB1Q9NS25 103 aaPredicted RBP10.16□□□□□ -0.78
DDX56-208ENST00000467318 IGHV3-38A0A0C4DH36 116 aa10.15□□□□□ -0.78
DDX56-208ENST00000467318 NAA38Q9BRA0 125 aaKnown RBP10.15□□□□□ -0.78
DDX56-208ENST00000467318 VCX2Q9H322 139 aa10.15□□□□□ -0.78
DDX56-208ENST00000467318 COTL1Q14019 142 aa10.15□□□□□ -0.79
DDX56-208ENST00000467318 TMEM170BQ5T4T1 132 aa10.15□□□□□ -0.79
DDX56-208ENST00000467318 LELP1Q5T871 98 aa10.15□□□□□ -0.79
DDX56-208ENST00000467318 LINC00588Q9Y4M8 146 aa10.15□□□□□ -0.79
DDX56-208ENST00000467318 TRBV6-8A0A0A6YYG3 113 aa10.14□□□□□ -0.79
DDX56-208ENST00000467318 F8W1H4 67 aa10.14□□□□□ -0.79
DDX56-208ENST00000467318 LEPROTO15243 131 aa10.14□□□□□ -0.79
DDX56-208ENST00000467318 RNF151Q2KHN1 245 aa10.14□□□□□ -0.79
DDX56-208ENST00000467318 UBE2DNLQ8IWF7 75 aa10.14□□□□□ -0.79
DDX56-208ENST00000467318 K7ERJ3 54 aa10.13□□□□□ -0.79
DDX56-208ENST00000467318 LGALS3P17931 250 aaKnown RBP10.13□□□□□ -0.79
DDX56-208ENST00000467318 PLEKHB2Q96CS7 222 aa10.13□□□□□ -0.79
DDX56-208ENST00000467318 VPS25Q9BRG1 176 aa10.13□□□□□ -0.79
DDX56-208ENST00000467318 UPK3BQ9BT76 320 aa10.13□□□□□ -0.79
DDX56-208ENST00000467318 LYSTQ99698 3801 aa10.13□□□□□ -0.79
DDX56-208ENST00000467318 LYRM7Q5U5X0 104 aa10.12□□□□□ -0.79
DDX56-208ENST00000467318 J3QQQ9 107 aa10.12□□□□□ -0.79
DDX56-208ENST00000467318 NTM-AS1Q6ZSK4 140 aa10.12□□□□□ -0.79
DDX56-208ENST00000467318 TMEM223A0PJW6 202 aa10.11□□□□□ -0.79
DDX56-208ENST00000467318 IGLV4-3A0A075B6K6 122 aa10.1□□□□□ -0.79
DDX56-208ENST00000467318 UBE2D1P51668 147 aa10.1□□□□□ -0.79
DDX56-208ENST00000467318 LINC00476Q8WZB0 136 aa10.1□□□□□ -0.79
DDX56-208ENST00000467318 SPANXA1Q9NS26 97 aa10.1□□□□□ -0.79
DDX56-208ENST00000467318 AMELXQ99217 191 aa10.09□□□□□ -0.79
DDX56-208ENST00000467318 DEFB104AQ8WTQ1 72 aa10.09□□□□□ -0.79
DDX56-208ENST00000467318 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
DDX56-208ENST00000467318 Q9H8V8 135 aa10.09□□□□□ -0.79
DDX56-208ENST00000467318 J3QR89 54 aa10.08□□□□□ -0.8
DDX56-208ENST00000467318 LY6G6CO95867 125 aa10.08□□□□□ -0.8
DDX56-208ENST00000467318 PCP4P48539 62 aa10.08□□□□□ -0.8
DDX56-208ENST00000467318 CHCHD5Q9BSY4 110 aa10.08□□□□□ -0.8
DDX56-208ENST00000467318 H7C423 109 aa10.07□□□□□ -0.8
DDX56-208ENST00000467318 ZNF22P17026 224 aaPredicted RBP10.07□□□□□ -0.8
DDX56-208ENST00000467318 UBE2L6O14933 153 aa10.06□□□□□ -0.8
DDX56-208ENST00000467318 IGHV3-30P01768 117 aa10.06□□□□□ -0.8
DDX56-208ENST00000467318 IGHV3-30-5P0DP03 117 aa10.06□□□□□ -0.8
DDX56-208ENST00000467318 MRPS36P82909 103 aaKnown RBP10.06□□□□□ -0.8
DDX56-208ENST00000467318 SMAGPQ0VAQ4 97 aa10.06□□□□□ -0.8
DDX56-208ENST00000467318 WFDC10BQ8IUB3 73 aa10.06□□□□□ -0.8
DDX56-208ENST00000467318 CHCHD7Q9BUK0 85 aa10.06□□□□□ -0.8
DDX56-208ENST00000467318 PGPEP1Q9NXJ5 209 aa10.06□□□□□ -0.8
DDX56-208ENST00000467318 A0A0J9YXV3 536 aa10.06□□□□□ -0.8
DDX56-208ENST00000467318 TMEM238C9JI98 176 aa10.06□□□□□ -0.8
DDX56-208ENST00000467318 TMEM262E9PQX1 116 aa10.06□□□□□ -0.8
DDX56-208ENST00000467318 DNAH10OSP0CZ25 163 aa10.06□□□□□ -0.8
DDX56-208ENST00000467318 OPRPNQ99935 248 aaPredicted RBP10.06□□□□□ -0.8
DDX56-208ENST00000467318 TINCRA0A1B0GVN0 87 aa10.05□□□□□ -0.8
DDX56-208ENST00000467318 RPL24P83731 157 aaKnown RBP10.05□□□□□ -0.8
DDX56-208ENST00000467318 LINC01556Q5JQF7 62 aa10.05□□□□□ -0.8
DDX56-208ENST00000467318 TIMM21Q9BVV7 248 aa10.05□□□□□ -0.8
DDX56-208ENST00000467318 TSPEAR-AS2P59090 65 aa10.04□□□□□ -0.8
DDX56-208ENST00000467318 A0A1B0GUV1 79 aa10.03□□□□□ -0.8
DDX56-208ENST00000467318 TRBV20-1A0A075B6N2 111 aa10.02□□□□□ -0.8
DDX56-208ENST00000467318 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.02□□□□□ -0.8
DDX56-208ENST00000467318 LCE6AA0A183 80 aa10.02□□□□□ -0.8
DDX56-208ENST00000467318 GAGE6Q13070 117 aa10.02□□□□□ -0.8
DDX56-208ENST00000467318 UBE2D4Q9Y2X8 147 aa10.02□□□□□ -0.8
DDX56-208ENST00000467318 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.02□□□□□ -0.81
DDX56-208ENST00000467318 IGKV2-29A2NJV5 120 aaPredicted RBP10.02□□□□□ -0.81
DDX56-208ENST00000467318 H3BMG7 143 aa10.02□□□□□ -0.81
DDX56-208ENST00000467318 APOMO95445 188 aa10.02□□□□□ -0.81
DDX56-208ENST00000467318 C10orf126Q8N4M7 172 aa10.02□□□□□ -0.81
DDX56-208ENST00000467318 SVIPQ8NHG7 77 aa10.02□□□□□ -0.81
DDX56-208ENST00000467318 PRO1854Q9UHT4 67 aa10.02□□□□□ -0.81
DDX56-208ENST00000467318 IGHV1-58A0A0C4DH39 117 aa10.01□□□□□ -0.81
DDX56-208ENST00000467318 TSPAN13O95857 204 aa10.01□□□□□ -0.81
DDX56-208ENST00000467318 TTC32Q5I0X7 151 aa10.01□□□□□ -0.81
DDX56-208ENST00000467318 CFC1BP0CG36 223 aa10□□□□□ -0.81
DDX56-208ENST00000467318 CFC1P0CG37 223 aa10□□□□□ -0.81
DDX56-208ENST00000467318 IGHV3-30-3P0DP02 117 aa10□□□□□ -0.81
DDX56-208ENST00000467318 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
DDX56-208ENST00000467318 DNAH1Q9P2D7 4330 aa10□□□□□ -0.81
DDX56-208ENST00000467318 KMT2CQ8NEZ4 4911 aaKnown RBP10□□□□□ -0.81
DDX56-208ENST00000467318 VPS13DQ5THJ4 4388 aa10□□□□□ -0.81
DDX56-208ENST00000467318 A0A0B4J2C4 111 aa9.99□□□□□ -0.81
DDX56-208ENST00000467318 IGHV3-33P01772 117 aa9.99□□□□□ -0.81
DDX56-208ENST00000467318 DGAT2L7PQ6IED9 249 aa9.99□□□□□ -0.81
DDX56-208ENST00000467318 TMEM101Q96IK0 257 aa9.99□□□□□ -0.81
DDX56-208ENST00000467318 GEMIN7Q9H840 131 aaKnown RBP9.99□□□□□ -0.81
DDX56-208ENST00000467318 LOC107984156A0A0G2JMH3 177 aa9.99□□□□□ -0.81
DDX56-208ENST00000467318 NBDYA0A0U1RRE5 68 aa9.99□□□□□ -0.81
DDX56-208ENST00000467318 WFDC2Q14508 124 aa9.99□□□□□ -0.81
DDX56-208ENST00000467318 ARL17AQ8IVW1 177 aa9.99□□□□□ -0.81
DDX56-208ENST00000467318 FAM104AQ969W3 186 aa9.99□□□□□ -0.81
DDX56-208ENST00000467318 PRO0461Q9UI25 63 aa9.99□□□□□ -0.81
DDX56-208ENST00000467318 A0A0J9YXY3 114 aa9.98□□□□□ -0.81
DDX56-208ENST00000467318 PSMB2P49721 201 aa9.98□□□□□ -0.81
DDX56-208ENST00000467318 Q8N3U1 123 aa9.98□□□□□ -0.81
DDX56-208ENST00000467318 ALMS1Q8TCU4 4167 aa9.97□□□□□ -0.81
DDX56-208ENST00000467318 ANGP03950 147 aaKnown RBP9.97□□□□□ -0.81
DDX56-208ENST00000467318 SPANXDQ9BXN6 97 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms