RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 SCGB3A1Q96QR1 104 aa8.92□□□□□ -0.98
LIMD1-203ENST00000465039 OPRPNQ99935 248 aaPredicted RBP8.92□□□□□ -0.98
LIMD1-203ENST00000465039 RYR1P21817 5038 aa8.91□□□□□ -0.98
LIMD1-203ENST00000465039 F8WDY8 70 aa8.91□□□□□ -0.98
LIMD1-203ENST00000465039 MALP21145 153 aa8.91□□□□□ -0.98
LIMD1-203ENST00000465039 OR10D4PQ8NGN7 298 aa8.91□□□□□ -0.98
LIMD1-203ENST00000465039 URB1-AS1Q96HZ7 61 aa8.91□□□□□ -0.98
LIMD1-203ENST00000465039 A0A087WZ39 114 aa8.9□□□□□ -0.98
LIMD1-203ENST00000465039 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.9□□□□□ -0.98
LIMD1-203ENST00000465039 TRGC2P03986 189 aa8.9□□□□□ -0.98
LIMD1-203ENST00000465039 S100A1P23297 94 aa8.9□□□□□ -0.98
LIMD1-203ENST00000465039 LINC00242Q5T6M2 205 aa8.9□□□□□ -0.98
LIMD1-203ENST00000465039 HERC2O95714 4834 aa8.9□□□□□ -0.98
LIMD1-203ENST00000465039 A0A096LNJ9 63 aa8.89□□□□□ -0.99
LIMD1-203ENST00000465039 ATP5LO75964 103 aa8.89□□□□□ -0.99
LIMD1-203ENST00000465039 HERVK_113P63121 156 aa8.89□□□□□ -0.99
LIMD1-203ENST00000465039 APOBP04114 4563 aaKnown RBP8.89□□□□□ -0.99
LIMD1-203ENST00000465039 ZNF561-AS1K7EIQ3 104 aa8.88□□□□□ -0.99
LIMD1-203ENST00000465039 C2orf48Q96LS8 159 aa8.88□□□□□ -0.99
LIMD1-203ENST00000465039 IGHV3-64A0A075B6Q5 118 aa8.87□□□□□ -0.99
LIMD1-203ENST00000465039 FUSP35637 526 aaKnown RBP eCLIP8.87□□□□□ -0.99
LIMD1-203ENST00000465039 PMVKQ15126 192 aa8.87□□□□□ -0.99
LIMD1-203ENST00000465039 PDZD11Q5EBL8 140 aa8.87□□□□□ -0.99
LIMD1-203ENST00000465039 HIGD2BQ4VC39 106 aa8.86□□□□□ -0.99
LIMD1-203ENST00000465039 C5orf38Q86SI9 138 aa8.86□□□□□ -0.99
LIMD1-203ENST00000465039 BAGE3Q86Y29 109 aa8.86□□□□□ -0.99
LIMD1-203ENST00000465039 CST9LQ9H4G1 147 aa8.86□□□□□ -0.99
LIMD1-203ENST00000465039 IGLV5-45A0A087WSX0 123 aa8.85□□□□□ -0.99
LIMD1-203ENST00000465039 TINCRA0A1B0GVN0 87 aa8.85□□□□□ -0.99
LIMD1-203ENST00000465039 HSBP1O75506 76 aa8.85□□□□□ -0.99
LIMD1-203ENST00000465039 SLPIP03973 132 aa8.85□□□□□ -0.99
LIMD1-203ENST00000465039 SDIM1Q6ZPB5 146 aa8.85□□□□□ -0.99
LIMD1-203ENST00000465039 GEMIN7Q9H840 131 aaKnown RBP8.85□□□□□ -0.99
LIMD1-203ENST00000465039 HSPG2P98160 4391 aa8.84□□□□□ -0.99
LIMD1-203ENST00000465039 SPAG11BQ08648 103 aa8.84□□□□□ -0.99
LIMD1-203ENST00000465039 SYCNQ0VAF6 134 aa8.84□□□□□ -0.99
LIMD1-203ENST00000465039 CIRBPQ14011 172 aaKnown RBP8.84□□□□□ -0.99
LIMD1-203ENST00000465039 CARD19Q96LW7 228 aa8.84□□□□□ -0.99
LIMD1-203ENST00000465039 XGP55808 180 aa8.83□□□□□ -1
LIMD1-203ENST00000465039 RNF151Q2KHN1 245 aa8.83□□□□□ -1
LIMD1-203ENST00000465039 ORAOV1Q8WV07 137 aa8.83□□□□□ -1
LIMD1-203ENST00000465039 CHAC1Q9BUX1 264 aa8.83□□□□□ -1
LIMD1-203ENST00000465039 LINC00474Q9P2X8 69 aa8.83□□□□□ -1
LIMD1-203ENST00000465039 IGLV4-69A0A075B6H9 119 aa8.82□□□□□ -1
LIMD1-203ENST00000465039 SCO1O75880 301 aa8.82□□□□□ -1
LIMD1-203ENST00000465039 COX6A2Q02221 97 aa8.82□□□□□ -1
LIMD1-203ENST00000465039 MRPL35Q9NZE8 188 aaKnown RBP8.82□□□□□ -1
LIMD1-203ENST00000465039 TRAV12-1A0A0B4J245 112 aa8.81□□□□□ -1
LIMD1-203ENST00000465039 ATP6V1G1O75348 118 aa8.81□□□□□ -1
LIMD1-203ENST00000465039 IGLC3P0DOY3 106 aa8.81□□□□□ -1
LIMD1-203ENST00000465039 ZC2HC1BQ5TFG8 222 aa8.81□□□□□ -1
LIMD1-203ENST00000465039 CAMK2N2Q96S95 79 aa8.81□□□□□ -1
LIMD1-203ENST00000465039 DNAH8Q96JB1 4490 aa8.81□□□□□ -1
LIMD1-203ENST00000465039 A0A0J9YXV3 536 aa8.8□□□□□ -1
LIMD1-203ENST00000465039 H3BRM9 83 aa8.8□□□□□ -1
LIMD1-203ENST00000465039 NDUFA1O15239 70 aa8.8□□□□□ -1
LIMD1-203ENST00000465039 SERF1AO75920 110 aa8.8□□□□□ -1
LIMD1-203ENST00000465039 PMCHL1Q16048 86 aa8.8□□□□□ -1
LIMD1-203ENST00000465039 LINC01620Q4KN68 170 aa8.8□□□□□ -1
LIMD1-203ENST00000465039 Q8IZM0 81 aa8.8□□□□□ -1
LIMD1-203ENST00000465039 Q8N1X5 172 aa8.8□□□□□ -1
LIMD1-203ENST00000465039 LINC00469Q8N7U9 141 aa8.8□□□□□ -1
LIMD1-203ENST00000465039 PACRGQ96M98 296 aaPredicted RBP8.8□□□□□ -1
LIMD1-203ENST00000465039 FAM30AQ9NZY2 134 aa8.8□□□□□ -1
LIMD1-203ENST00000465039 CDKN2A-AS1Q9UH64 79 aa8.8□□□□□ -1
LIMD1-203ENST00000465039 HIST1H2BKO60814 126 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 HIST1H2BJP06899 126 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 HIST1H2BOP23527 126 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 HIST1H2BBP33778 126 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 CXCL5P42830 114 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 HIST1H2BDP58876 126 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 LINC00310P59036 64 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 HIST1H2BCP62807 126 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 KIAA0087Q14695 138 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 HIST2H2BEQ16778 126 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.79□□□□□ -1
LIMD1-203ENST00000465039 HIST1H2BHQ93079 126 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 IFI27L1Q96BM0 104 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 HIST1H2BNQ99877 126 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 HIST1H2BMQ99879 126 aa8.79□□□□□ -1
LIMD1-203ENST00000465039 TRBV30A0A0K0K1B3 111 aa8.78□□□□□ -1
LIMD1-203ENST00000465039 Q6ZRU5 148 aa8.78□□□□□ -1
LIMD1-203ENST00000465039 SCXQ7RTU7 201 aa8.78□□□□□ -1
LIMD1-203ENST00000465039 SPACA4Q8TDM5 124 aa8.78□□□□□ -1
LIMD1-203ENST00000465039 HSPB8Q9UJY1 196 aa8.78□□□□□ -1
LIMD1-203ENST00000465039 LOC107984640A0A0U1RRK4 108 aa8.77□□□□□ -1.01
LIMD1-203ENST00000465039 SMIM1B2RUZ4 78 aa8.77□□□□□ -1.01
LIMD1-203ENST00000465039 LEPROTL1O95214 131 aa8.77□□□□□ -1.01
LIMD1-203ENST00000465039 PRSS2P07478 247 aa8.77□□□□□ -1.01
LIMD1-203ENST00000465039 COA6Q5JTJ3 125 aaKnown RBP8.77□□□□□ -1.01
LIMD1-203ENST00000465039 TLX1NBP0CAT3 122 aa8.76□□□□□ -1.01
LIMD1-203ENST00000465039 CIRBP-AS1Q8TBR5 109 aa8.76□□□□□ -1.01
LIMD1-203ENST00000465039 LINC00526Q96FQ7 95 aa8.76□□□□□ -1.01
LIMD1-203ENST00000465039 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.76□□□□□ -1.01
LIMD1-203ENST00000465039 F8VRH5 84 aa8.75□□□□□ -1.01
LIMD1-203ENST00000465039 NDUFA6P56556 154 aa8.75□□□□□ -1.01
LIMD1-203ENST00000465039 SFTA2Q6UW10 78 aa8.75□□□□□ -1.01
LIMD1-203ENST00000465039 FAM19A2Q8N3H0 131 aa8.75□□□□□ -1.01
LIMD1-203ENST00000465039 IGLV5-39A0A0G2JS06 123 aa8.74□□□□□ -1.01
LIMD1-203ENST00000465039 CKS1BP61024 79 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms