RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 RNF183Q96D59 192 aa12.45□□□□□ -0.42
CCDC144A-210ENST00000456009 SOSTDC1Q6X4U4 206 aa12.45□□□□□ -0.42
CCDC144A-210ENST00000456009 C16orf74Q96GX8 76 aa12.45□□□□□ -0.42
CCDC144A-210ENST00000456009 TRBV10-2A0A0K0K1G8 114 aa12.44□□□□□ -0.42
CCDC144A-210ENST00000456009 CIRBPQ14011 172 aaKnown RBP12.44□□□□□ -0.42
CCDC144A-210ENST00000456009 H7C423 109 aa12.44□□□□□ -0.42
CCDC144A-210ENST00000456009 TMEM243Q9BU79 118 aa12.43□□□□□ -0.42
CCDC144A-210ENST00000456009 UBE2L6O14933 153 aa12.43□□□□□ -0.42
CCDC144A-210ENST00000456009 PRIMA1Q86XR5 153 aa12.42□□□□□ -0.42
CCDC144A-210ENST00000456009 COX6CP09669 75 aa12.42□□□□□ -0.42
CCDC144A-210ENST00000456009 TRGV4A0A0C4DH28 118 aa12.41□□□□□ -0.42
CCDC144A-210ENST00000456009 CMC4P56277 68 aaPredicted RBP12.41□□□□□ -0.42
CCDC144A-210ENST00000456009 OVOL2Q9BRP0 275 aa12.41□□□□□ -0.42
CCDC144A-210ENST00000456009 FN1P02751 2386 aaKnown RBP12.41□□□□□ -0.42
CCDC144A-210ENST00000456009 IGKV3OR2-268A0A0C4DH90 116 aa12.4□□□□□ -0.42
CCDC144A-210ENST00000456009 TRBV6-4A0A1B0GX49 114 aa12.4□□□□□ -0.42
CCDC144A-210ENST00000456009 GAGE6Q13070 117 aa12.4□□□□□ -0.42
CCDC144A-210ENST00000456009 MEIG1Q5JSS6 88 aa12.4□□□□□ -0.42
CCDC144A-210ENST00000456009 C2orf82Q6UX34 121 aa12.4□□□□□ -0.42
CCDC144A-210ENST00000456009 LINC01600Q96MT4 127 aa12.4□□□□□ -0.42
CCDC144A-210ENST00000456009 IGLV4-60A0A075B6I1 120 aa12.39□□□□□ -0.43
CCDC144A-210ENST00000456009 LST1O00453 97 aa12.39□□□□□ -0.43
CCDC144A-210ENST00000456009 FHL2Q14192 279 aa12.39□□□□□ -0.43
CCDC144A-210ENST00000456009 SMR3AQ99954 134 aa12.39□□□□□ -0.43
CCDC144A-210ENST00000456009 FAM110AQ9BQ89 295 aa12.39□□□□□ -0.43
CCDC144A-210ENST00000456009 KRTAP10-3P60369 221 aa12.38□□□□□ -0.43
CCDC144A-210ENST00000456009 NBEAL2Q6ZNJ1 2754 aa12.37□□□□□ -0.43
CCDC144A-210ENST00000456009 HELZ2Q9BYK8 2649 aaKnown RBP12.37□□□□□ -0.43
CCDC144A-210ENST00000456009 TMEM262E9PQX1 116 aa12.36□□□□□ -0.43
CCDC144A-210ENST00000456009 HILS1P60008 231 aa12.36□□□□□ -0.43
CCDC144A-210ENST00000456009 CIDEAO60543 219 aa12.36□□□□□ -0.43
CCDC144A-210ENST00000456009 CKS1BP61024 79 aa12.36□□□□□ -0.43
CCDC144A-210ENST00000456009 TRBV6-8A0A0A6YYG3 113 aa12.35□□□□□ -0.43
CCDC144A-210ENST00000456009 DEFB130BP0DP73 79 aa12.35□□□□□ -0.43
CCDC144A-210ENST00000456009 DEFB130AP0DP74 79 aa12.35□□□□□ -0.43
CCDC144A-210ENST00000456009 UBE2WQ96B02 151 aa12.35□□□□□ -0.43
CCDC144A-210ENST00000456009 UNC79Q9P2D8 2635 aa12.35□□□□□ -0.43
CCDC144A-210ENST00000456009 CRLF1O75462 422 aa12.34□□□□□ -0.43
CCDC144A-210ENST00000456009 TOMM7Q9P0U1 55 aa12.34□□□□□ -0.43
CCDC144A-210ENST00000456009 CHCHD5Q9BSY4 110 aa12.33□□□□□ -0.44
CCDC144A-210ENST00000456009 GCN1Q92616 2671 aaKnown RBP12.33□□□□□ -0.44
CCDC144A-210ENST00000456009 VWFP04275 2813 aa12.33□□□□□ -0.44
CCDC144A-210ENST00000456009 HERV-K104P63124 156 aa12.33□□□□□ -0.44
CCDC144A-210ENST00000456009 SHISA2Q6UWI4 295 aa12.33□□□□□ -0.44
CCDC144A-210ENST00000456009 FASNP49327 2511 aaKnown RBP12.33□□□□□ -0.44
CCDC144A-210ENST00000456009 H3BT86 120 aa12.32□□□□□ -0.44
CCDC144A-210ENST00000456009 HIVEP2P31629 2446 aa12.32□□□□□ -0.44
CCDC144A-210ENST00000456009 A0A1B0GV72 72 aa12.32□□□□□ -0.44
CCDC144A-210ENST00000456009 COX7B2Q8TF08 81 aa12.32□□□□□ -0.44
CCDC144A-210ENST00000456009 SPATA3Q8NHX4 192 aa12.31□□□□□ -0.44
CCDC144A-210ENST00000456009 TRAV8-4A0A0B4J246 113 aa12.3□□□□□ -0.44
CCDC144A-210ENST00000456009 IGHV3OR16-9A0A0B4J2B5 98 aa12.3□□□□□ -0.44
CCDC144A-210ENST00000456009 COX7A2LO14548 114 aa12.29□□□□□ -0.44
CCDC144A-210ENST00000456009 MIR7-3HGQ8N6C7 128 aa12.29□□□□□ -0.44
CCDC144A-210ENST00000456009 C5orf38Q86SI9 138 aa12.29□□□□□ -0.44
CCDC144A-210ENST00000456009 CITED1Q99966 193 aa12.28□□□□□ -0.44
CCDC144A-210ENST00000456009 COPS9Q8WXC6 57 aa12.28□□□□□ -0.44
CCDC144A-210ENST00000456009 PF4P02776 101 aa12.27□□□□□ -0.44
CCDC144A-210ENST00000456009 FAM218AQ96MZ4 157 aa12.27□□□□□ -0.44
CCDC144A-210ENST00000456009 LINC00482Q8N8I6 264 aa12.27□□□□□ -0.45
CCDC144A-210ENST00000456009 GYPEP15421 78 aa12.26□□□□□ -0.45
CCDC144A-210ENST00000456009 IGKV2-28A0A075B6P5 120 aa12.26□□□□□ -0.45
CCDC144A-210ENST00000456009 A0A096LPF7 62 aa12.26□□□□□ -0.45
CCDC144A-210ENST00000456009 IGKV2D-28P01615 120 aa12.26□□□□□ -0.45
CCDC144A-210ENST00000456009 LINC00337Q8N6G1 96 aa12.26□□□□□ -0.45
CCDC144A-210ENST00000456009 KIR2DL5BQ8NHK3 375 aa12.25□□□□□ -0.45
CCDC144A-210ENST00000456009 X6R8D5 127 aa12.25□□□□□ -0.45
CCDC144A-210ENST00000456009 A0A087WZ39 114 aa12.25□□□□□ -0.45
CCDC144A-210ENST00000456009 LINC00959A0A1B0GUT2 108 aa12.25□□□□□ -0.45
CCDC144A-210ENST00000456009 LINC00158P58513 81 aa12.25□□□□□ -0.45
CCDC144A-210ENST00000456009 J3QKU1 62 aa12.24□□□□□ -0.45
CCDC144A-210ENST00000456009 LINC00612Q8N6U2 182 aa12.24□□□□□ -0.45
CCDC144A-210ENST00000456009 SNCGO76070 127 aa12.23□□□□□ -0.45
CCDC144A-210ENST00000456009 DEFB121Q5J5C9 76 aa12.23□□□□□ -0.45
CCDC144A-210ENST00000456009 SND1-IT1Q9HBX3 110 aa12.23□□□□□ -0.45
CCDC144A-210ENST00000456009 PFN2P35080 140 aa12.23□□□□□ -0.45
CCDC144A-210ENST00000456009 C15orf53Q8NAA6 179 aa12.23□□□□□ -0.45
CCDC144A-210ENST00000456009 NOTCH2Q04721 2471 aa12.23□□□□□ -0.45
CCDC144A-210ENST00000456009 CLPSL2Q6UWE3 100 aa12.22□□□□□ -0.45
CCDC144A-210ENST00000456009 C11orf68Q9H3H3 251 aaKnown RBP12.22□□□□□ -0.45
CCDC144A-210ENST00000456009 DEFB4AO15263 64 aa12.21□□□□□ -0.45
CCDC144A-210ENST00000456009 XCL1P47992 114 aa12.21□□□□□ -0.45
CCDC144A-210ENST00000456009 CCL18P55774 89 aa12.21□□□□□ -0.45
CCDC144A-210ENST00000456009 TTC32Q5I0X7 151 aa12.21□□□□□ -0.46
CCDC144A-210ENST00000456009 PPDPFQ9H3Y8 114 aa12.21□□□□□ -0.46
CCDC144A-210ENST00000456009 C22orf24Q9Y442 160 aa12.21□□□□□ -0.46
CCDC144A-210ENST00000456009 OTOGQ6ZRI0 2925 aa12.21□□□□□ -0.46
CCDC144A-210ENST00000456009 GAGE2BQ13066 116 aa12.2□□□□□ -0.46
CCDC144A-210ENST00000456009 GAGE2EQ4V326 116 aa12.2□□□□□ -0.46
CCDC144A-210ENST00000456009 GAGE2DQ9UEU5 116 aa12.2□□□□□ -0.46
CCDC144A-210ENST00000456009 HECTD1Q9ULT8 2610 aa12.2□□□□□ -0.46
CCDC144A-210ENST00000456009 TRAV13-2A0A0B4J235 113 aa12.2□□□□□ -0.46
CCDC144A-210ENST00000456009 Q9HAA7 133 aa12.2□□□□□ -0.46
CCDC144A-210ENST00000456009 LY6G6DO95868 133 aa12.19□□□□□ -0.46
CCDC144A-210ENST00000456009 CRPP02741 224 aa12.19□□□□□ -0.46
CCDC144A-210ENST00000456009 FAM222AQ5U5X8 452 aa12.19□□□□□ -0.46
CCDC144A-210ENST00000456009 TENM1Q9UKZ4 2725 aa12.19□□□□□ -0.46
CCDC144A-210ENST00000456009 TRAV26-1A0A087WT03 109 aa12.19□□□□□ -0.46
CCDC144A-210ENST00000456009 BAALC-AS2P0C853 105 aa12.19□□□□□ -0.46
CCDC144A-210ENST00000456009 RPL28P46779 137 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms