RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 SPANXA1Q9NS26 97 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 CHTOPQ9Y3Y2 248 aaKnown RBP3.33□□□□□ -1.88
RIF1-207ENST00000454583 TIMM8BQ9Y5J9 83 aaPredicted RBP3.33□□□□□ -1.88
RIF1-207ENST00000454583 A0A1B0GUV1 79 aa3.32□□□□□ -1.88
RIF1-207ENST00000454583 LEPROTO15243 131 aa3.32□□□□□ -1.88
RIF1-207ENST00000454583 TIMM17BO60830 172 aa3.32□□□□□ -1.88
RIF1-207ENST00000454583 HNRNPA3P51991 378 aaKnown RBP3.32□□□□□ -1.88
RIF1-207ENST00000454583 RBX1P62877 108 aa3.32□□□□□ -1.88
RIF1-207ENST00000454583 CHAC1Q9BUX1 264 aa3.32□□□□□ -1.88
RIF1-207ENST00000454583 CDC42SE2Q9NRR3 84 aa3.32□□□□□ -1.88
RIF1-207ENST00000454583 IGKV3-20P01619 116 aa3.32□□□□□ -1.88
RIF1-207ENST00000454583 LINC00242Q5T6M2 205 aa3.32□□□□□ -1.88
RIF1-207ENST00000454583 DNAH10OSP0CZ25 163 aa3.32□□□□□ -1.88
RIF1-207ENST00000454583 LYPD5Q6UWN5 251 aa3.32□□□□□ -1.88
RIF1-207ENST00000454583 WNK1Q9H4A3 2382 aa3.31□□□□□ -1.88
RIF1-207ENST00000454583 ZFAND6Q6FIF0 208 aa3.31□□□□□ -1.88
RIF1-207ENST00000454583 LINC01561Q8N1V8 128 aa3.31□□□□□ -1.88
RIF1-207ENST00000454583 NTN5Q8WTR8 489 aaPredicted RBP3.31□□□□□ -1.88
RIF1-207ENST00000454583 CYSLTR1Q9Y271 337 aa3.31□□□□□ -1.88
RIF1-207ENST00000454583 TEX48A0A1B0GUV7 120 aa3.31□□□□□ -1.88
RIF1-207ENST00000454583 ZNF561-AS1K7EIQ3 104 aa3.31□□□□□ -1.88
RIF1-207ENST00000454583 NUDT3O95989 172 aa3.31□□□□□ -1.88
RIF1-207ENST00000454583 HINT1P49773 126 aaPredicted RBP3.31□□□□□ -1.88
RIF1-207ENST00000454583 ADAMTSL4-AS1Q5T5F5 129 aa3.31□□□□□ -1.88
RIF1-207ENST00000454583 Q8N3U1 123 aa3.31□□□□□ -1.88
RIF1-207ENST00000454583 SCGB3A1Q96QR1 104 aa3.31□□□□□ -1.88
RIF1-207ENST00000454583 PRADC1Q9BSG0 188 aa3.31□□□□□ -1.88
RIF1-207ENST00000454583 SMIM1B2RUZ4 78 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 K7EP34 96 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 ESRGQ1W209 222 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 Q6ZUT4 128 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 DAZ4Q86SG3 579 aaKnown RBP3.3□□□□□ -1.88
RIF1-207ENST00000454583 LINC00588Q9Y4M8 146 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 A0A1W2PPM0 123 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 CFC1BP0CG36 223 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 CFC1P0CG37 223 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 NANOS2P60321 138 aaKnown RBP3.3□□□□□ -1.88
RIF1-207ENST00000454583 RPL11P62913 178 aaKnown RBP3.3□□□□□ -1.88
RIF1-207ENST00000454583 ENHOQ6UWT2 76 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 LINC01587Q99440 93 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 IGHV3OR16-9A0A0B4J2B5 98 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 IGHV1-58A0A0C4DH39 117 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 A0A0J9YXY3 114 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 LRCOL1A6NCL2 159 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 NDUFA1O15239 70 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 G0S2P27469 103 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 SDIM1Q6ZPB5 146 aa3.3□□□□□ -1.88
RIF1-207ENST00000454583 IGLL5B9A064 214 aa3.29□□□□□ -1.88
RIF1-207ENST00000454583 PAPPA-AS1Q5QFB9 102 aa3.29□□□□□ -1.88
RIF1-207ENST00000454583 CEMP1Q6PRD7 247 aaPredicted RBP3.29□□□□□ -1.88
RIF1-207ENST00000454583 A0A0B4J2C4 111 aa3.29□□□□□ -1.88
RIF1-207ENST00000454583 KIAA0087Q14695 138 aa3.29□□□□□ -1.88
RIF1-207ENST00000454583 CASC10Q5T4H9 136 aa3.29□□□□□ -1.88
RIF1-207ENST00000454583 SOSTDC1Q6X4U4 206 aa3.29□□□□□ -1.88
RIF1-207ENST00000454583 TMEM101Q96IK0 257 aa3.29□□□□□ -1.88
RIF1-207ENST00000454583 DEFB4AO15263 64 aa3.28□□□□□ -1.88
RIF1-207ENST00000454583 IGHV3-30-3P0DP02 117 aa3.28□□□□□ -1.88
RIF1-207ENST00000454583 TCTAP57738 103 aa3.28□□□□□ -1.88
RIF1-207ENST00000454583 RRN3P1Q2M238 152 aa3.28□□□□□ -1.88
RIF1-207ENST00000454583 TRBV6-8A0A0A6YYG3 113 aa3.28□□□□□ -1.88
RIF1-207ENST00000454583 TSPAN13O95857 204 aa3.28□□□□□ -1.88
RIF1-207ENST00000454583 SMIM15Q7Z3B0 74 aa3.28□□□□□ -1.88
RIF1-207ENST00000454583 KRTAP7-1Q8IUC3 87 aa3.28□□□□□ -1.88
RIF1-207ENST00000454583 PRO0255Q9UI72 69 aa3.28□□□□□ -1.88
RIF1-207ENST00000454583 A0A0J9YXV3 536 aa3.28□□□□□ -1.88
RIF1-207ENST00000454583 MGPP08493 103 aa3.28□□□□□ -1.88
RIF1-207ENST00000454583 SPART-AS1P0CW21 52 aa3.28□□□□□ -1.88
RIF1-207ENST00000454583 ZNF25P17030 456 aaPredicted RBP3.28□□□□□ -1.88
RIF1-207ENST00000454583 NMUP48645 174 aa3.28□□□□□ -1.88
RIF1-207ENST00000454583 IGLV4-60A0A075B6I1 120 aa3.27□□□□□ -1.89
RIF1-207ENST00000454583 KRTAP10-4P60372 401 aaPredicted RBP3.27□□□□□ -1.89
RIF1-207ENST00000454583 FOXI1Q12951 378 aa3.27□□□□□ -1.89
RIF1-207ENST00000454583 DEFB121Q5J5C9 76 aa3.27□□□□□ -1.89
RIF1-207ENST00000454583 LINC01556Q5JQF7 62 aa3.27□□□□□ -1.89
RIF1-207ENST00000454583 MRAPQ8TCY5 172 aa3.27□□□□□ -1.89
RIF1-207ENST00000454583 J3QQQ9 107 aa3.27□□□□□ -1.89
RIF1-207ENST00000454583 S100A4P26447 101 aaKnown RBP3.27□□□□□ -1.89
RIF1-207ENST00000454583 KIR2DL4Q99706 377 aa3.27□□□□□ -1.89
RIF1-207ENST00000454583 H3BS24 57 aa3.27□□□□□ -1.89
RIF1-207ENST00000454583 K7ERJ3 54 aa3.27□□□□□ -1.89
RIF1-207ENST00000454583 LELP1Q5T871 98 aa3.27□□□□□ -1.89
RIF1-207ENST00000454583 Q8NDZ9 215 aa3.27□□□□□ -1.89
RIF1-207ENST00000454583 GAGE12BA1L429 117 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 GAGE7O76087 117 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 SLPIP03973 132 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 GAGE12FP0CL80 117 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 GAGE12GP0CL81 117 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 GAGE12IP0CL82 117 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 ZNF56Q15929 161 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 PCLOQ9Y6V0 5065 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.26□□□□□ -1.89
RIF1-207ENST00000454583 A0A087WZ39 114 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 TRAV10A0A0B4J240 114 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 IGKV2-29A2NJV5 120 aaPredicted RBP3.26□□□□□ -1.89
RIF1-207ENST00000454583 IGHV3-33P01772 117 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 CIRBPQ14011 172 aaKnown RBP3.26□□□□□ -1.89
RIF1-207ENST00000454583 LINC00167Q96N53 147 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 MYCBP2O75592 4640 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 IGKV2-28A0A075B6P5 120 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 TRGV1A0A0A0MS02 117 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms