RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-208ENST00000441141 HMGN4O00479 90 aa-0.14□□□□□ -2.43
VPS8-208ENST00000441141 UQCR11O14957 56 aa-0.14□□□□□ -2.43
VPS8-208ENST00000441141 SSSCA1O60232 199 aa-0.14□□□□□ -2.43
VPS8-208ENST00000441141 COX17Q14061 63 aa-0.14□□□□□ -2.43
VPS8-208ENST00000441141 Q5VSD8 79 aa-0.14□□□□□ -2.43
VPS8-208ENST00000441141 Q6JHZ5 121 aa-0.14□□□□□ -2.43
VPS8-208ENST00000441141 RPL13AP3Q6NVV1 102 aa-0.14□□□□□ -2.43
VPS8-208ENST00000441141 TP53AIP1Q9HCN2 124 aa-0.14□□□□□ -2.43
VPS8-208ENST00000441141 KMT2CQ8NEZ4 4911 aaKnown RBP-0.14□□□□□ -2.43
VPS8-208ENST00000441141 PDE4DIPQ5VU43 2346 aa-0.14□□□□□ -2.43
VPS8-208ENST00000441141 SVEP1Q4LDE5 3571 aa-0.14□□□□□ -2.43
VPS8-208ENST00000441141 UBR4Q5T4S7 5183 aa-0.14□□□□□ -2.43
VPS8-208ENST00000441141 USP9YO00507 2555 aaPredicted RBP-0.14□□□□□ -2.43
VPS8-208ENST00000441141 DOPEY1Q5JWR5 2465 aa-0.14□□□□□ -2.43
VPS8-208ENST00000441141 ROBO1Q9Y6N7 1651 aa-0.14□□□□□ -2.43
VPS8-208ENST00000441141 BCL9LQ86UU0 1499 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 MYO18BQ8IUG5 2567 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 SPTBN4Q9H254 2564 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 PDCD11Q14690 1871 aaKnown RBP-0.15□□□□□ -2.43
VPS8-208ENST00000441141 SPRR1AP35321 89 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 TPPP2P59282 170 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 MRPL54Q6P161 138 aaKnown RBP-0.15□□□□□ -2.43
VPS8-208ENST00000441141 FAT1Q14517 4588 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 RIMS1Q86UR5 1692 aaKnown RBP-0.15□□□□□ -2.43
VPS8-208ENST00000441141 QRICH2Q9H0J4 1663 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 LAMA5O15230 3695 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 PCLOQ9Y6V0 5065 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 LYSTQ99698 3801 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 PDZD2O15018 2839 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 MXRA5Q9NR99 2828 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 PKHD1L1Q86WI1 4243 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 CCDC168Q8NDH2 2452 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 DNAH3Q8TD57 4116 aa-0.15□□□□□ -2.43
VPS8-208ENST00000441141 AKAP9Q99996 3911 aa-0.16□□□□□ -2.43
VPS8-208ENST00000441141 RGPD2P0DJD1 1756 aa-0.16□□□□□ -2.43
VPS8-208ENST00000441141 A0A1B0GV90 55 aa-0.16□□□□□ -2.44
VPS8-208ENST00000441141 APOC3P02656 99 aa-0.16□□□□□ -2.44
VPS8-208ENST00000441141 ZZEF1O43149 2961 aa-0.16□□□□□ -2.44
VPS8-208ENST00000441141 A2ML1A8K2U0 1454 aa-0.16□□□□□ -2.44
VPS8-208ENST00000441141 PKD1P98161 4303 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 LRRK2Q5S007 2527 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 DNAH6Q9C0G6 4158 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 LOC285095A0A1B0GVY8 99 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 EFCAB10A6NFE3 127 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 CHKB-CPT1BH3BT56 60 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 CEP290O15078 2479 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 DLEU1O43261 78 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 TNFP01375 233 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 SPRR2DP22532 72 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 KRTAP19-7Q3SYF9 63 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 C9orf153Q5TBE3 101 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 RIF1Q5UIP0 2472 aaKnown RBP-0.17□□□□□ -2.44
VPS8-208ENST00000441141 C10orf71Q711Q0 1435 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 MYOZ3Q8TDC0 251 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 TEP1Q99973 2627 aaKnown RBP-0.17□□□□□ -2.44
VPS8-208ENST00000441141 DPH3P1Q9H4G8 78 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 ITPR3Q14573 2671 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 ZFHX3Q15911 3703 aa-0.17□□□□□ -2.44
VPS8-208ENST00000441141 USH2AO75445 5202 aa-0.18□□□□□ -2.44
VPS8-208ENST00000441141 KTN1Q86UP2 1357 aaKnown RBP-0.18□□□□□ -2.44
VPS8-208ENST00000441141 FASNP49327 2511 aaKnown RBP-0.18□□□□□ -2.44
VPS8-208ENST00000441141 HECTD1Q9ULT8 2610 aa-0.18□□□□□ -2.44
VPS8-208ENST00000441141 FXYD6-FXYD2A0A087WZ82 144 aa-0.18□□□□□ -2.44
VPS8-208ENST00000441141 TRBV6-1A0A0K0K1D8 114 aa-0.18□□□□□ -2.44
VPS8-208ENST00000441141 SNAPC5O75971 98 aa-0.18□□□□□ -2.44
VPS8-208ENST00000441141 SFT2D2O95562 160 aa-0.18□□□□□ -2.44
VPS8-208ENST00000441141 PRM1P04553 51 aa-0.18□□□□□ -2.44
VPS8-208ENST00000441141 DCDP81605 110 aaKnown RBP-0.18□□□□□ -2.44
VPS8-208ENST00000441141 STARD9Q9P2P6 4700 aa-0.18□□□□□ -2.44
VPS8-208ENST00000441141 VPS13BQ7Z7G8 4022 aa-0.18□□□□□ -2.44
VPS8-208ENST00000441141 HYDINQ4G0P3 5121 aa-0.18□□□□□ -2.44
VPS8-208ENST00000441141 NALCNQ8IZF0 1738 aa-0.18□□□□□ -2.44
VPS8-208ENST00000441141 RYR1P21817 5038 aa-0.19□□□□□ -2.44
VPS8-208ENST00000441141 COL14A1Q05707 1796 aaKnown RBP-0.19□□□□□ -2.44
VPS8-208ENST00000441141 PAPPAQ13219 1627 aa-0.19□□□□□ -2.44
VPS8-208ENST00000441141 SHROOM2Q13796 1616 aa-0.19□□□□□ -2.44
VPS8-208ENST00000441141 SONP18583 2426 aaKnown RBP-0.19□□□□□ -2.44
VPS8-208ENST00000441141 UBE2L5PA0A1B0GUS4 154 aa-0.19□□□□□ -2.44
VPS8-208ENST00000441141 UBE2L3P68036 154 aaKnown RBP-0.19□□□□□ -2.44
VPS8-208ENST00000441141 CDC42SE2Q9NRR3 84 aa-0.19□□□□□ -2.44
VPS8-208ENST00000441141 TET3O43151 1660 aa-0.19□□□□□ -2.44
VPS8-208ENST00000441141 EPPK1P58107 5090 aaKnown RBP-0.19□□□□□ -2.44
VPS8-208ENST00000441141 NEBP20929 6669 aa-0.19□□□□□ -2.44
VPS8-208ENST00000441141 AKAP13Q12802 2813 aa-0.19□□□□□ -2.44
VPS8-208ENST00000441141 REV3LO60673 3130 aa-0.2□□□□□ -2.44
VPS8-208ENST00000441141 MYOM1P52179 1685 aa-0.2□□□□□ -2.44
VPS8-208ENST00000441141 SCN7AQ01118 1682 aa-0.2□□□□□ -2.44
VPS8-208ENST00000441141 CUL7Q14999 1698 aa-0.2□□□□□ -2.44
VPS8-208ENST00000441141 SHANK2Q9UPX8 1470 aa-0.2□□□□□ -2.44
VPS8-208ENST00000441141 NUP188Q5SRE5 1749 aa-0.2□□□□□ -2.44
VPS8-208ENST00000441141 FMN2Q9NZ56 1722 aa-0.2□□□□□ -2.44
VPS8-208ENST00000441141 IGLC1P0CG04 106 aa-0.2□□□□□ -2.44
VPS8-208ENST00000441141 PIGYQ3MUY2 71 aa-0.2□□□□□ -2.44
VPS8-208ENST00000441141 SPRR4Q96PI1 79 aa-0.2□□□□□ -2.44
VPS8-208ENST00000441141 NXT2Q9NPJ8 142 aaKnown RBP-0.2□□□□□ -2.44
VPS8-208ENST00000441141 RGPD3A6NKT7 1758 aaPredicted RBP-0.2□□□□□ -2.44
VPS8-208ENST00000441141 RGPD4Q7Z3J3 1758 aa-0.2□□□□□ -2.44
VPS8-208ENST00000441141 PAPPA2Q9BXP8 1791 aa-0.2□□□□□ -2.44
VPS8-208ENST00000441141 TEX15Q9BXT5 2789 aa-0.2□□□□□ -2.44
VPS8-208ENST00000441141 RNF213Q63HN8 5207 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms