RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ICOSQ9Y6W8 199 aa10.16□□□□□ -0.78
LIMD1-202ENST00000440097 SHISA2Q6UWI4 295 aa10.16□□□□□ -0.78
LIMD1-202ENST00000440097 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.16□□□□□ -0.78
LIMD1-202ENST00000440097 LITAFQ99732 161 aa10.16□□□□□ -0.78
LIMD1-202ENST00000440097 FAM110AQ9BQ89 295 aa10.16□□□□□ -0.78
LIMD1-202ENST00000440097 GIG44P09565 113 aaPredicted RBP10.15□□□□□ -0.78
LIMD1-202ENST00000440097 IGHV3-30-3P0DP02 117 aa10.15□□□□□ -0.78
LIMD1-202ENST00000440097 IGLV4-3A0A075B6K6 122 aa10.15□□□□□ -0.78
LIMD1-202ENST00000440097 C20orf203Q8NBC4 194 aa10.15□□□□□ -0.78
LIMD1-202ENST00000440097 CLEC2BQ92478 149 aa10.14□□□□□ -0.79
LIMD1-202ENST00000440097 TRGV2A0A075B6R0 118 aa10.14□□□□□ -0.79
LIMD1-202ENST00000440097 RS1O15537 224 aa10.14□□□□□ -0.79
LIMD1-202ENST00000440097 ADAMTSL4-AS1Q5T5F5 129 aa10.14□□□□□ -0.79
LIMD1-202ENST00000440097 SPATA3Q8NHX4 192 aa10.14□□□□□ -0.79
LIMD1-202ENST00000440097 NPC2P61916 151 aa10.14□□□□□ -0.79
LIMD1-202ENST00000440097 MEIG1Q5JSS6 88 aa10.14□□□□□ -0.79
LIMD1-202ENST00000440097 TIMM21Q9BVV7 248 aa10.14□□□□□ -0.79
LIMD1-202ENST00000440097 TRAV8-3A0A0A6YYJ7 113 aa10.13□□□□□ -0.79
LIMD1-202ENST00000440097 C16orf74Q96GX8 76 aa10.13□□□□□ -0.79
LIMD1-202ENST00000440097 H3BT86 120 aa10.12□□□□□ -0.79
LIMD1-202ENST00000440097 EDA2RQ9HAV5 297 aa10.12□□□□□ -0.79
LIMD1-202ENST00000440097 C9orf66Q5T8R8 295 aa10.12□□□□□ -0.79
LIMD1-202ENST00000440097 CEMP1Q6PRD7 247 aaPredicted RBP10.12□□□□□ -0.79
LIMD1-202ENST00000440097 CHCHD5Q9BSY4 110 aa10.12□□□□□ -0.79
LIMD1-202ENST00000440097 COX6CP09669 75 aa10.11□□□□□ -0.79
LIMD1-202ENST00000440097 MRPL23Q16540 153 aaKnown RBP10.11□□□□□ -0.79
LIMD1-202ENST00000440097 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.1□□□□□ -0.79
LIMD1-202ENST00000440097 IGKV2-29A2NJV5 120 aaPredicted RBP10.1□□□□□ -0.79
LIMD1-202ENST00000440097 RNASE13Q5GAN3 156 aaKnown RBP10.1□□□□□ -0.79
LIMD1-202ENST00000440097 IL17DQ8TAD2 202 aa10.1□□□□□ -0.79
LIMD1-202ENST00000440097 C3orf56Q8N813 242 aa10.1□□□□□ -0.79
LIMD1-202ENST00000440097 SPANXDQ9BXN6 97 aa10.1□□□□□ -0.79
LIMD1-202ENST00000440097 SPANXCQ9NY87 97 aa10.1□□□□□ -0.79
LIMD1-202ENST00000440097 NDUFA12Q9UI09 145 aa10.1□□□□□ -0.79
LIMD1-202ENST00000440097 A8MZ25 164 aa10.09□□□□□ -0.79
LIMD1-202ENST00000440097 LST1O00453 97 aa10.09□□□□□ -0.79
LIMD1-202ENST00000440097 CSNK1G2-AS1Q8NCQ2 148 aa10.09□□□□□ -0.79
LIMD1-202ENST00000440097 DNAJC30Q96LL9 226 aa10.09□□□□□ -0.79
LIMD1-202ENST00000440097 MIAQ16674 131 aa10.09□□□□□ -0.79
LIMD1-202ENST00000440097 FAM104AQ969W3 186 aa10.09□□□□□ -0.79
LIMD1-202ENST00000440097 FAM240AA0A1B0GVK7 77 aa10.09□□□□□ -0.79
LIMD1-202ENST00000440097 RPL36AP83881 106 aaKnown RBP10.09□□□□□ -0.79
LIMD1-202ENST00000440097 DAZ2Q13117 558 aaKnown RBP10.09□□□□□ -0.79
LIMD1-202ENST00000440097 RPL36ALQ969Q0 106 aaKnown RBP10.09□□□□□ -0.79
LIMD1-202ENST00000440097 IGHV1-58A0A0C4DH39 117 aa10.08□□□□□ -0.8
LIMD1-202ENST00000440097 K7EQD1 137 aa10.08□□□□□ -0.8
LIMD1-202ENST00000440097 DEFB121Q5J5C9 76 aa10.08□□□□□ -0.8
LIMD1-202ENST00000440097 MRPS36P82909 103 aaKnown RBP10.08□□□□□ -0.8
LIMD1-202ENST00000440097 SPANXA1Q9NS26 97 aa10.08□□□□□ -0.8
LIMD1-202ENST00000440097 TRGV4A0A0C4DH28 118 aa10.07□□□□□ -0.8
LIMD1-202ENST00000440097 PLAC8L1A1L4L8 177 aa10.07□□□□□ -0.8
LIMD1-202ENST00000440097 DEFB130BP0DP73 79 aa10.07□□□□□ -0.8
LIMD1-202ENST00000440097 DEFB130AP0DP74 79 aa10.07□□□□□ -0.8
LIMD1-202ENST00000440097 DGAT2L7PQ6IED9 249 aa10.07□□□□□ -0.8
LIMD1-202ENST00000440097 TRBV7-7A0A0K0K1E9 115 aa10.06□□□□□ -0.8
LIMD1-202ENST00000440097 CHCHD7Q9BUK0 85 aa10.06□□□□□ -0.8
LIMD1-202ENST00000440097 DAND5Q8N907 189 aa10.05□□□□□ -0.8
LIMD1-202ENST00000440097 VSIG2Q96IQ7 327 aa10.05□□□□□ -0.8
LIMD1-202ENST00000440097 NBEAL1Q6ZS30 2694 aa10.05□□□□□ -0.8
LIMD1-202ENST00000440097 PYGO1Q9Y3Y4 419 aa10.05□□□□□ -0.8
LIMD1-202ENST00000440097 MGAM2Q2M2H8 2515 aa10.05□□□□□ -0.8
LIMD1-202ENST00000440097 TRBV10-1A0A0K0K1A3 114 aa10.04□□□□□ -0.8
LIMD1-202ENST00000440097 TMEM101Q96IK0 257 aa10.04□□□□□ -0.8
LIMD1-202ENST00000440097 UBE2D4Q9Y2X8 147 aa10.04□□□□□ -0.8
LIMD1-202ENST00000440097 FAM236AA0A1B0GUQ0 79 aa10.03□□□□□ -0.8
LIMD1-202ENST00000440097 FAM236BA0A1B0GV22 79 aa10.03□□□□□ -0.8
LIMD1-202ENST00000440097 LOC100131303A0A0U1RQF7 123 aa10.03□□□□□ -0.8
LIMD1-202ENST00000440097 DEFB135Q30KP9 77 aa10.03□□□□□ -0.8
LIMD1-202ENST00000440097 TINCRA0A1B0GVN0 87 aa10.02□□□□□ -0.81
LIMD1-202ENST00000440097 DAZ4Q86SG3 579 aaKnown RBP10.02□□□□□ -0.81
LIMD1-202ENST00000440097 OVOL2Q9BRP0 275 aa10.02□□□□□ -0.81
LIMD1-202ENST00000440097 DAZ3Q9NR90 486 aaKnown RBP10.02□□□□□ -0.81
LIMD1-202ENST00000440097 TMEM126AQ9H061 195 aa10.01□□□□□ -0.81
LIMD1-202ENST00000440097 DEFB4AO15263 64 aa10□□□□□ -0.81
LIMD1-202ENST00000440097 SMCR5Q8TEV8 140 aa10□□□□□ -0.81
LIMD1-202ENST00000440097 UBE2L6O14933 153 aa9.99□□□□□ -0.81
LIMD1-202ENST00000440097 TRBV6-4A0A1B0GX49 114 aa9.99□□□□□ -0.81
LIMD1-202ENST00000440097 LINC00694P0DN24 101 aa9.99□□□□□ -0.81
LIMD1-202ENST00000440097 APOC4P55056 127 aa9.99□□□□□ -0.81
LIMD1-202ENST00000440097 TIMM17BO60830 172 aa9.98□□□□□ -0.81
LIMD1-202ENST00000440097 NTM-AS1Q6ZSK4 140 aa9.98□□□□□ -0.81
LIMD1-202ENST00000440097 ACYP1P07311 99 aa9.98□□□□□ -0.81
LIMD1-202ENST00000440097 X6R8D5 127 aa9.98□□□□□ -0.81
LIMD1-202ENST00000440097 IMUPQ9GZP8 106 aa9.97□□□□□ -0.81
LIMD1-202ENST00000440097 PPDPFQ9H3Y8 114 aa9.97□□□□□ -0.81
LIMD1-202ENST00000440097 CDKN2A-AS1Q9UH64 79 aa9.97□□□□□ -0.81
LIMD1-202ENST00000440097 FHL2Q14192 279 aa9.97□□□□□ -0.81
LIMD1-202ENST00000440097 A0A0U1RRA0 63 aa9.97□□□□□ -0.81
LIMD1-202ENST00000440097 NDUFA1O15239 70 aa9.96□□□□□ -0.81
LIMD1-202ENST00000440097 FAM222AQ5U5X8 452 aa9.96□□□□□ -0.81
LIMD1-202ENST00000440097 TMEM243Q9BU79 118 aa9.96□□□□□ -0.81
LIMD1-202ENST00000440097 TRAV13-1A0A0B4J241 112 aa9.96□□□□□ -0.82
LIMD1-202ENST00000440097 COX7A2LO14548 114 aa9.96□□□□□ -0.82
LIMD1-202ENST00000440097 C9orf153Q5TBE3 101 aa9.96□□□□□ -0.82
LIMD1-202ENST00000440097 LINC00308Q8TCZ7 52 aa9.96□□□□□ -0.82
LIMD1-202ENST00000440097 SMIM9A6NGZ8 99 aa9.95□□□□□ -0.82
LIMD1-202ENST00000440097 KRTAP24-1Q3LI83 254 aa9.95□□□□□ -0.82
LIMD1-202ENST00000440097 WFDC9Q8NEX5 89 aa9.95□□□□□ -0.82
LIMD1-202ENST00000440097 ZNF625Q96I27 306 aaPredicted RBP9.95□□□□□ -0.82
LIMD1-202ENST00000440097 ANK2Q01484 3957 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms