RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 FHL2Q14192 279 aa12.92□□□□□ -0.34
KCNC4-204ENST00000438661 RPL36ALQ969Q0 106 aaKnown RBP12.92□□□□□ -0.34
KCNC4-204ENST00000438661 Q96MF0 132 aa12.92□□□□□ -0.34
KCNC4-204ENST00000438661 USP9YO00507 2555 aaPredicted RBP12.92□□□□□ -0.34
KCNC4-204ENST00000438661 IGHV4-30-2A0A087WSY4 118 aa12.92□□□□□ -0.34
KCNC4-204ENST00000438661 Q6JHZ5 121 aa12.92□□□□□ -0.34
KCNC4-204ENST00000438661 PFN2P35080 140 aa12.91□□□□□ -0.34
KCNC4-204ENST00000438661 ZNF415Q09FC8 603 aa12.91□□□□□ -0.34
KCNC4-204ENST00000438661 RNASE1P07998 156 aaKnown RBP12.9□□□□□ -0.35
KCNC4-204ENST00000438661 CCL19Q99731 98 aa12.9□□□□□ -0.35
KCNC4-204ENST00000438661 RBMY1BA6NDE4 496 aaKnown RBP12.89□□□□□ -0.35
KCNC4-204ENST00000438661 RBMY1EA6NEQ0 496 aaKnown RBP12.89□□□□□ -0.35
KCNC4-204ENST00000438661 GHRHP01286 108 aa12.89□□□□□ -0.35
KCNC4-204ENST00000438661 RBMY1DP0C7P1 496 aaKnown RBP12.89□□□□□ -0.35
KCNC4-204ENST00000438661 PAX4O43316 350 aa12.88□□□□□ -0.35
KCNC4-204ENST00000438661 Q5XG85 94 aa12.88□□□□□ -0.35
KCNC4-204ENST00000438661 JMJD1CQ15652 2540 aa12.88□□□□□ -0.35
KCNC4-204ENST00000438661 UTP20O75691 2785 aaKnown RBP12.88□□□□□ -0.35
KCNC4-204ENST00000438661 C11orf68Q9H3H3 251 aaKnown RBP12.88□□□□□ -0.35
KCNC4-204ENST00000438661 ZANQ9Y493 2812 aa12.88□□□□□ -0.35
KCNC4-204ENST00000438661 C20orf197Q8N268 126 aa12.87□□□□□ -0.35
KCNC4-204ENST00000438661 MSMBP08118 114 aa12.87□□□□□ -0.35
KCNC4-204ENST00000438661 FAM19A1Q7Z5A9 133 aa12.87□□□□□ -0.35
KCNC4-204ENST00000438661 PSMB8P28062 276 aa12.87□□□□□ -0.35
KCNC4-204ENST00000438661 IGHV4-59P01825 116 aa12.86□□□□□ -0.35
KCNC4-204ENST00000438661 TRGV1A0A0A0MS02 117 aa12.86□□□□□ -0.35
KCNC4-204ENST00000438661 DEFB136Q30KP8 78 aa12.86□□□□□ -0.35
KCNC4-204ENST00000438661 WIPF1O43516 503 aa12.85□□□□□ -0.35
KCNC4-204ENST00000438661 NTM-AS1Q6ZSK4 140 aa12.85□□□□□ -0.35
KCNC4-204ENST00000438661 SETD2Q9BYW2 2564 aaPredicted RBP12.85□□□□□ -0.35
KCNC4-204ENST00000438661 PF4P02776 101 aa12.85□□□□□ -0.35
KCNC4-204ENST00000438661 ENHOQ6UWT2 76 aa12.85□□□□□ -0.35
KCNC4-204ENST00000438661 PRORYQ9H606 182 aa12.85□□□□□ -0.35
KCNC4-204ENST00000438661 CCL18P55774 89 aa12.84□□□□□ -0.35
KCNC4-204ENST00000438661 XCL2Q9UBD3 114 aa12.84□□□□□ -0.35
KCNC4-204ENST00000438661 UBE2E2Q96LR5 201 aa12.84□□□□□ -0.35
KCNC4-204ENST00000438661 FLNCQ14315 2725 aa12.84□□□□□ -0.35
KCNC4-204ENST00000438661 TMEM243Q9BU79 118 aa12.84□□□□□ -0.35
KCNC4-204ENST00000438661 CDC42SE2Q9NRR3 84 aa12.84□□□□□ -0.35
KCNC4-204ENST00000438661 OVOL2Q9BRP0 275 aa12.83□□□□□ -0.36
KCNC4-204ENST00000438661 UBE2L6O14933 153 aa12.83□□□□□ -0.36
KCNC4-204ENST00000438661 COX7B2Q8TF08 81 aa12.83□□□□□ -0.36
KCNC4-204ENST00000438661 H0YGX0 51 aa12.82□□□□□ -0.36
KCNC4-204ENST00000438661 TLN2Q9Y4G6 2542 aa12.82□□□□□ -0.36
KCNC4-204ENST00000438661 DEFB112Q30KQ8 113 aa12.82□□□□□ -0.36
KCNC4-204ENST00000438661 KHDC1LQ5JSQ8 128 aa12.81□□□□□ -0.36
KCNC4-204ENST00000438661 C11orf72Q8NBR9 251 aa12.81□□□□□ -0.36
KCNC4-204ENST00000438661 USP9XQ93008 2570 aaPredicted RBP12.81□□□□□ -0.36
KCNC4-204ENST00000438661 CFAP46Q8IYW2 2715 aa12.81□□□□□ -0.36
KCNC4-204ENST00000438661 SLURP1P55000 103 aa12.8□□□□□ -0.36
KCNC4-204ENST00000438661 ORMDL1Q9P0S3 153 aa12.8□□□□□ -0.36
KCNC4-204ENST00000438661 CHD6Q8TD26 2715 aa12.8□□□□□ -0.36
KCNC4-204ENST00000438661 CENPEQ02224 2701 aa12.79□□□□□ -0.36
KCNC4-204ENST00000438661 OBSCN-AS1Q96MR7 158 aa12.78□□□□□ -0.36
KCNC4-204ENST00000438661 C18orf65Q6ZTR6 163 aa12.78□□□□□ -0.36
KCNC4-204ENST00000438661 B4DSR2 109 aa12.78□□□□□ -0.36
KCNC4-204ENST00000438661 CCKP06307 115 aa12.78□□□□□ -0.36
KCNC4-204ENST00000438661 MAPK1IP1LQ8NDC0 245 aa12.78□□□□□ -0.36
KCNC4-204ENST00000438661 PRR3P79522 188 aaKnown RBP12.77□□□□□ -0.37
KCNC4-204ENST00000438661 MXRA5Q9NR99 2828 aa12.76□□□□□ -0.37
KCNC4-204ENST00000438661 SS18Q15532 418 aa12.76□□□□□ -0.37
KCNC4-204ENST00000438661 POLQO75417 2590 aa12.76□□□□□ -0.37
KCNC4-204ENST00000438661 NIPBLQ6KC79 2804 aaeCLIP12.76□□□□□ -0.37
KCNC4-204ENST00000438661 Q6ZTI0 123 aa12.76□□□□□ -0.37
KCNC4-204ENST00000438661 TMEM89A2RUT3 159 aa12.75□□□□□ -0.37
KCNC4-204ENST00000438661 PTPN13Q12923 2485 aa12.75□□□□□ -0.37
KCNC4-204ENST00000438661 FBN2P35556 2912 aa12.74□□□□□ -0.37
KCNC4-204ENST00000438661 LOC100131303A0A0U1RQF7 123 aa12.74□□□□□ -0.37
KCNC4-204ENST00000438661 FAM236DA0A1B0GTK5 79 aa12.74□□□□□ -0.37
KCNC4-204ENST00000438661 K7EQD1 137 aa12.74□□□□□ -0.37
KCNC4-204ENST00000438661 INSP01308 110 aa12.74□□□□□ -0.37
KCNC4-204ENST00000438661 FAM236CP0DP71 79 aa12.74□□□□□ -0.37
KCNC4-204ENST00000438661 XCL1P47992 114 aa12.74□□□□□ -0.37
KCNC4-204ENST00000438661 PKD1L2Q7Z442 2459 aa12.73□□□□□ -0.37
KCNC4-204ENST00000438661 NDUFC2O95298 119 aa12.72□□□□□ -0.37
KCNC4-204ENST00000438661 SNURFQ9Y675 71 aa12.72□□□□□ -0.37
KCNC4-204ENST00000438661 SONP18583 2426 aaKnown RBP12.72□□□□□ -0.37
KCNC4-204ENST00000438661 LINC00336Q6ZUF6 198 aa12.71□□□□□ -0.37
KCNC4-204ENST00000438661 FAM19A3Q7Z5A8 133 aa12.71□□□□□ -0.37
KCNC4-204ENST00000438661 FN1P02751 2386 aaKnown RBP12.71□□□□□ -0.37
KCNC4-204ENST00000438661 C6orf226Q5I0X4 101 aa12.7□□□□□ -0.38
KCNC4-204ENST00000438661 UBL5Q9BZL1 73 aa12.7□□□□□ -0.38
KCNC4-204ENST00000438661 MAP6D1Q9H9H5 199 aa12.7□□□□□ -0.38
KCNC4-204ENST00000438661 IGLV4-60A0A075B6I1 120 aa12.7□□□□□ -0.38
KCNC4-204ENST00000438661 S100A7L2Q5SY68 101 aa12.7□□□□□ -0.38
KCNC4-204ENST00000438661 C1orf43Q9BWL3 253 aa12.69□□□□□ -0.38
KCNC4-204ENST00000438661 DYNLRB2Q8TF09 96 aa12.69□□□□□ -0.38
KCNC4-204ENST00000438661 NOP10Q9NPE3 64 aaKnown RBP12.68□□□□□ -0.38
KCNC4-204ENST00000438661 DOPEY1Q5JWR5 2465 aa12.68□□□□□ -0.38
KCNC4-204ENST00000438661 HAMPP81172 84 aa12.68□□□□□ -0.38
KCNC4-204ENST00000438661 TRBV6-4A0A1B0GX49 114 aa12.67□□□□□ -0.38
KCNC4-204ENST00000438661 EPG5Q9HCE0 2579 aa12.67□□□□□ -0.38
KCNC4-204ENST00000438661 PKIGQ9Y2B9 76 aa12.67□□□□□ -0.38
KCNC4-204ENST00000438661 AKAP9Q99996 3911 aa12.66□□□□□ -0.38
KCNC4-204ENST00000438661 WFDC11Q8NEX6 87 aa12.66□□□□□ -0.38
KCNC4-204ENST00000438661 MYO18BQ8IUG5 2567 aa12.66□□□□□ -0.38
KCNC4-204ENST00000438661 IBA57-AS1B1ANH7 110 aa12.66□□□□□ -0.38
KCNC4-204ENST00000438661 LINC01356Q8N9X3 169 aa12.66□□□□□ -0.38
KCNC4-204ENST00000438661 NBPF19A0A087WUL8 3843 aa12.66□□□□□ -0.38
KCNC4-204ENST00000438661 JMJD7-PLA2G4BH0Y9G9 81 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms