RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 CELSR1Q9NYQ6 3014 aa5.4□□□□□ -1.54
SYNPO2-203ENST00000434046 JMJD1CQ15652 2540 aa5.4□□□□□ -1.54
SYNPO2-203ENST00000434046 F5H768 121 aa5.4□□□□□ -1.55
SYNPO2-203ENST00000434046 LECT2O14960 151 aa5.4□□□□□ -1.55
SYNPO2-203ENST00000434046 NDUFA1O15239 70 aa5.4□□□□□ -1.55
SYNPO2-203ENST00000434046 C9orf85Q96MD7 179 aa5.4□□□□□ -1.55
SYNPO2-203ENST00000434046 TRAV23DV6A0A075B6W5 121 aa5.4□□□□□ -1.55
SYNPO2-203ENST00000434046 USP17L23D6RBM5 183 aa5.4□□□□□ -1.55
SYNPO2-203ENST00000434046 SLPIP03973 132 aa5.4□□□□□ -1.55
SYNPO2-203ENST00000434046 RPL36AP83881 106 aaKnown RBP5.4□□□□□ -1.55
SYNPO2-203ENST00000434046 SERP2Q8N6R1 65 aa5.4□□□□□ -1.55
SYNPO2-203ENST00000434046 DCANP1Q8TF63 244 aa5.4□□□□□ -1.55
SYNPO2-203ENST00000434046 RPL36ALQ969Q0 106 aaKnown RBP5.4□□□□□ -1.55
SYNPO2-203ENST00000434046 Q9UF83 564 aa5.4□□□□□ -1.55
SYNPO2-203ENST00000434046 IGSF10Q6WRI0 2623 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 NCR3O14931 201 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 INSP01308 110 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 PSMB8P28062 276 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 CXCL5P42830 114 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 SND1-IT1Q9HBX3 110 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 PYGO1Q9Y3Y4 419 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 TRGV2A0A075B6R0 118 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 IGLV1-40P01703 118 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 C4orf26Q17RF5 130 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 TMEM243Q9BU79 118 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 TMEM258P61165 79 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 DEFB121Q5J5C9 76 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 C20orf197Q8N268 126 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 WFDC9Q8NEX5 89 aa5.39□□□□□ -1.55
SYNPO2-203ENST00000434046 ITPR1Q14643 2758 aa5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 TRGV1A0A0A0MS02 117 aa5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 RBMY1BA6NDE4 496 aaKnown RBP5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 RBMY1EA6NEQ0 496 aaKnown RBP5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 GHRHP01286 108 aa5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 RBMY1DP0C7P1 496 aaKnown RBP5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 RBMY1A1P0DJD3 496 aaKnown RBP5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 RBMY1CP0DJD4 496 aa5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 RPL35AP18077 110 aaKnown RBP5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 RBMY1FQ15415 496 aaKnown RBP5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 HIST2H2BDQ6DRA6 164 aa5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 MIR7-3HGQ8N6C7 128 aa5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 UBE2D4Q9Y2X8 147 aa5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 CCL24O00175 119 aa5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 TIMM17BO60830 172 aa5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 COX6A2Q02221 97 aa5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 APRG1Q8IVJ8 170 aa5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 FAM218AQ96MZ4 157 aa5.38□□□□□ -1.55
SYNPO2-203ENST00000434046 CRYGAP11844 174 aa5.37□□□□□ -1.55
SYNPO2-203ENST00000434046 PLA2G2AP14555 144 aa5.37□□□□□ -1.55
SYNPO2-203ENST00000434046 OVOL2Q9BRP0 275 aa5.37□□□□□ -1.55
SYNPO2-203ENST00000434046 K7EQG2 157 aa5.37□□□□□ -1.55
SYNPO2-203ENST00000434046 CMC4P56277 68 aaPredicted RBP5.37□□□□□ -1.55
SYNPO2-203ENST00000434046 FAM19A4Q96LR4 140 aa5.37□□□□□ -1.55
SYNPO2-203ENST00000434046 DNAJC9-AS1A6NH13 148 aa5.36□□□□□ -1.55
SYNPO2-203ENST00000434046 SOSTDC1Q6X4U4 206 aa5.36□□□□□ -1.55
SYNPO2-203ENST00000434046 DPH3Q96FX2 82 aa5.36□□□□□ -1.55
SYNPO2-203ENST00000434046 ZNF702PQ9H963 129 aa5.36□□□□□ -1.55
SYNPO2-203ENST00000434046 LINC00846Q9NV44 126 aa5.36□□□□□ -1.55
SYNPO2-203ENST00000434046 SEC61GP60059 68 aa5.36□□□□□ -1.55
SYNPO2-203ENST00000434046 CFHR3Q02985 330 aa5.36□□□□□ -1.55
SYNPO2-203ENST00000434046 CHCHD7Q9BUK0 85 aa5.36□□□□□ -1.55
SYNPO2-203ENST00000434046 Q6ZSN1 163 aa5.35□□□□□ -1.55
SYNPO2-203ENST00000434046 A0A087WYN8 130 aa5.35□□□□□ -1.55
SYNPO2-203ENST00000434046 HAMPP81172 84 aa5.35□□□□□ -1.55
SYNPO2-203ENST00000434046 C5orf38Q86SI9 138 aa5.35□□□□□ -1.55
SYNPO2-203ENST00000434046 TRGV4A0A0C4DH28 118 aa5.35□□□□□ -1.55
SYNPO2-203ENST00000434046 HILS1P60008 231 aa5.35□□□□□ -1.55
SYNPO2-203ENST00000434046 S100A7L2Q5SY68 101 aa5.35□□□□□ -1.55
SYNPO2-203ENST00000434046 LINC00242Q5T6M2 205 aa5.35□□□□□ -1.55
SYNPO2-203ENST00000434046 ENHOQ6UWT2 76 aa5.35□□□□□ -1.55
SYNPO2-203ENST00000434046 TMEM86BQ8N661 226 aa5.35□□□□□ -1.55
SYNPO2-203ENST00000434046 C4orf3Q8WVX3 66 aa5.35□□□□□ -1.55
SYNPO2-203ENST00000434046 CYSTM1Q9H1C7 97 aa5.35□□□□□ -1.55
SYNPO2-203ENST00000434046 SMIM11BQ8TCY0 68 aa5.34□□□□□ -1.55
SYNPO2-203ENST00000434046 UBL5Q9BZL1 73 aa5.34□□□□□ -1.55
SYNPO2-203ENST00000434046 ORMDL1Q9P0S3 153 aa5.34□□□□□ -1.55
SYNPO2-203ENST00000434046 PKIGQ9Y2B9 76 aa5.34□□□□□ -1.55
SYNPO2-203ENST00000434046 C18orf65Q6ZTR6 163 aa5.34□□□□□ -1.55
SYNPO2-203ENST00000434046 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.34□□□□□ -1.55
SYNPO2-203ENST00000434046 LINC01600Q96MT4 127 aa5.34□□□□□ -1.55
SYNPO2-203ENST00000434046 SMIM1B2RUZ4 78 aa5.34□□□□□ -1.56
SYNPO2-203ENST00000434046 H0YGX0 51 aa5.34□□□□□ -1.56
SYNPO2-203ENST00000434046 C6orf226Q5I0X4 101 aa5.34□□□□□ -1.56
SYNPO2-203ENST00000434046 Q6JHZ5 121 aa5.34□□□□□ -1.56
SYNPO2-203ENST00000434046 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
SYNPO2-203ENST00000434046 FAM222AQ5U5X8 452 aa5.33□□□□□ -1.56
SYNPO2-203ENST00000434046 HRNRQ86YZ3 2850 aaPredicted RBP5.33□□□□□ -1.56
SYNPO2-203ENST00000434046 VPS13CQ709C8 3753 aa5.33□□□□□ -1.56
SYNPO2-203ENST00000434046 C2orf48Q96LS8 159 aa5.33□□□□□ -1.56
SYNPO2-203ENST00000434046 LAMTOR3Q9UHA4 124 aa5.33□□□□□ -1.56
SYNPO2-203ENST00000434046 FAM236DA0A1B0GTK5 79 aa5.32□□□□□ -1.56
SYNPO2-203ENST00000434046 FAM236CP0DP71 79 aa5.32□□□□□ -1.56
SYNPO2-203ENST00000434046 COX7B2Q8TF08 81 aa5.32□□□□□ -1.56
SYNPO2-203ENST00000434046 RBM3P98179 157 aaKnown RBP5.32□□□□□ -1.56
SYNPO2-203ENST00000434046 LINC00337Q8N6G1 96 aa5.32□□□□□ -1.56
SYNPO2-203ENST00000434046 FAM19A1Q7Z5A9 133 aa5.32□□□□□ -1.56
SYNPO2-203ENST00000434046 MAP6D1Q9H9H5 199 aa5.32□□□□□ -1.56
SYNPO2-203ENST00000434046 DEFB114Q30KQ6 69 aa5.31□□□□□ -1.56
SYNPO2-203ENST00000434046 C9orf129Q5T035 196 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms