RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 FAT2Q9NYQ8 4349 aa11.9□□□□□ -0.5
CDC42EP1-203ENST00000430687 IGHV3OR16-9A0A0B4J2B5 98 aa11.9□□□□□ -0.5
CDC42EP1-203ENST00000430687 COA6Q5JTJ3 125 aaKnown RBP11.9□□□□□ -0.5
CDC42EP1-203ENST00000430687 CDPF1Q6NVV7 123 aa11.9□□□□□ -0.5
CDC42EP1-203ENST00000430687 SPATA12Q7Z6I5 190 aa11.9□□□□□ -0.5
CDC42EP1-203ENST00000430687 IGHV1-58A0A0C4DH39 117 aa11.88□□□□□ -0.51
CDC42EP1-203ENST00000430687 LEPROTL1O95214 131 aa11.88□□□□□ -0.51
CDC42EP1-203ENST00000430687 MALP21145 153 aa11.88□□□□□ -0.51
CDC42EP1-203ENST00000430687 HERVK_113P63121 156 aa11.88□□□□□ -0.51
CDC42EP1-203ENST00000430687 IFI27L1Q96BM0 104 aa11.88□□□□□ -0.51
CDC42EP1-203ENST00000430687 KRTAP10-2P60368 255 aa11.87□□□□□ -0.51
CDC42EP1-203ENST00000430687 LINC01561Q8N1V8 128 aa11.87□□□□□ -0.51
CDC42EP1-203ENST00000430687 C15orf56Q8N910 161 aa11.87□□□□□ -0.51
CDC42EP1-203ENST00000430687 HSPB8Q9UJY1 196 aa11.87□□□□□ -0.51
CDC42EP1-203ENST00000430687 A0A087WZ39 114 aa11.86□□□□□ -0.51
CDC42EP1-203ENST00000430687 GVQW2A0A096LPI5 108 aaPredicted RBP11.86□□□□□ -0.51
CDC42EP1-203ENST00000430687 TINCRA0A1B0GVN0 87 aa11.86□□□□□ -0.51
CDC42EP1-203ENST00000430687 APOMO95445 188 aa11.86□□□□□ -0.51
CDC42EP1-203ENST00000430687 PRSS1P07477 247 aa11.86□□□□□ -0.51
CDC42EP1-203ENST00000430687 NDUFA6P56556 154 aa11.86□□□□□ -0.51
CDC42EP1-203ENST00000430687 COX6A2Q02221 97 aa11.86□□□□□ -0.51
CDC42EP1-203ENST00000430687 C5orf38Q86SI9 138 aa11.86□□□□□ -0.51
CDC42EP1-203ENST00000430687 PACRGQ96M98 296 aaPredicted RBP11.86□□□□□ -0.51
CDC42EP1-203ENST00000430687 GEMIN7Q9H840 131 aaKnown RBP11.86□□□□□ -0.51
CDC42EP1-203ENST00000430687 TRAV12-1A0A0B4J245 112 aa11.85□□□□□ -0.51
CDC42EP1-203ENST00000430687 A0A0J9YXV3 536 aa11.85□□□□□ -0.51
CDC42EP1-203ENST00000430687 IGLV5-52A0A0A0MRZ9 124 aa11.84□□□□□ -0.51
CDC42EP1-203ENST00000430687 hDV102S1A0JD36 115 aa11.84□□□□□ -0.51
CDC42EP1-203ENST00000430687 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.83□□□□□ -0.52
CDC42EP1-203ENST00000430687 OR10D4PQ8NGN7 298 aa11.83□□□□□ -0.52
CDC42EP1-203ENST00000430687 IGHV3-64A0A075B6Q5 118 aa11.82□□□□□ -0.52
CDC42EP1-203ENST00000430687 IGLV5-45A0A087WSX0 123 aa11.82□□□□□ -0.52
CDC42EP1-203ENST00000430687 IGLC3P0DOY3 106 aa11.82□□□□□ -0.52
CDC42EP1-203ENST00000430687 CNBPP62633 177 aaKnown RBP11.82□□□□□ -0.52
CDC42EP1-203ENST00000430687 PKD1P98161 4303 aa11.82□□□□□ -0.52
CDC42EP1-203ENST00000430687 ZNF561-AS1K7EIQ3 104 aa11.81□□□□□ -0.52
CDC42EP1-203ENST00000430687 FABP4P15090 132 aa11.81□□□□□ -0.52
CDC42EP1-203ENST00000430687 CDKN2A-AS1Q9UH64 79 aa11.81□□□□□ -0.52
CDC42EP1-203ENST00000430687 CHTOPQ9Y3Y2 248 aaKnown RBP11.81□□□□□ -0.52
CDC42EP1-203ENST00000430687 BIRC6Q9NR09 4857 aa11.8□□□□□ -0.52
CDC42EP1-203ENST00000430687 C16orf90A8MZG2 172 aa11.8□□□□□ -0.52
CDC42EP1-203ENST00000430687 HIGD2BQ4VC39 106 aa11.8□□□□□ -0.52
CDC42EP1-203ENST00000430687 HECTD4Q9Y4D8 3996 aa11.79□□□□□ -0.52
CDC42EP1-203ENST00000430687 IGLV4-69A0A075B6H9 119 aa11.79□□□□□ -0.52
CDC42EP1-203ENST00000430687 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.79□□□□□ -0.52
CDC42EP1-203ENST00000430687 F8WDY8 70 aa11.79□□□□□ -0.52
CDC42EP1-203ENST00000430687 LINC00469Q8N7U9 141 aa11.79□□□□□ -0.52
CDC42EP1-203ENST00000430687 CHAC1Q9BUX1 264 aa11.79□□□□□ -0.52
CDC42EP1-203ENST00000430687 MAP1LC3CQ9BXW4 147 aa11.79□□□□□ -0.52
CDC42EP1-203ENST00000430687 F8VRH5 84 aa11.78□□□□□ -0.52
CDC42EP1-203ENST00000430687 GCSHP23434 173 aa11.78□□□□□ -0.52
CDC42EP1-203ENST00000430687 ORAOV1Q8WV07 137 aa11.78□□□□□ -0.52
CDC42EP1-203ENST00000430687 C2orf48Q96LS8 159 aa11.78□□□□□ -0.52
CDC42EP1-203ENST00000430687 DNAH11Q96DT5 4516 aa11.78□□□□□ -0.52
CDC42EP1-203ENST00000430687 H3BRM9 83 aa11.77□□□□□ -0.53
CDC42EP1-203ENST00000430687 S100A6P06703 90 aa11.77□□□□□ -0.53
CDC42EP1-203ENST00000430687 FUSP35637 526 aaKnown RBP eCLIP11.77□□□□□ -0.53
CDC42EP1-203ENST00000430687 SPAG11BQ08648 103 aa11.77□□□□□ -0.53
CDC42EP1-203ENST00000430687 C9orf163Q8N9P6 203 aa11.77□□□□□ -0.53
CDC42EP1-203ENST00000430687 EPPK1P58107 5090 aaKnown RBP11.77□□□□□ -0.53
CDC42EP1-203ENST00000430687 SLPIP03973 132 aa11.76□□□□□ -0.53
CDC42EP1-203ENST00000430687 ZNF22P17026 224 aaPredicted RBP11.75□□□□□ -0.53
CDC42EP1-203ENST00000430687 ODF1Q14990 250 aa11.75□□□□□ -0.53
CDC42EP1-203ENST00000430687 MRPL35Q9NZE8 188 aaKnown RBP11.75□□□□□ -0.53
CDC42EP1-203ENST00000430687 C11orf86A6NJI1 115 aa11.74□□□□□ -0.53
CDC42EP1-203ENST00000430687 SMIM1B2RUZ4 78 aa11.73□□□□□ -0.53
CDC42EP1-203ENST00000430687 H0Y8G0 127 aa11.73□□□□□ -0.53
CDC42EP1-203ENST00000430687 SYCNQ0VAF6 134 aa11.73□□□□□ -0.53
CDC42EP1-203ENST00000430687 KIAA0087Q14695 138 aa11.73□□□□□ -0.53
CDC42EP1-203ENST00000430687 Q8IZM0 81 aa11.73□□□□□ -0.53
CDC42EP1-203ENST00000430687 LINC00526Q96FQ7 95 aa11.73□□□□□ -0.53
CDC42EP1-203ENST00000430687 CAMK2N2Q96S95 79 aa11.73□□□□□ -0.53
CDC42EP1-203ENST00000430687 SYS1-DBNDD2H3BUS1 97 aa11.72□□□□□ -0.53
CDC42EP1-203ENST00000430687 PRSS2P07478 247 aa11.72□□□□□ -0.53
CDC42EP1-203ENST00000430687 PLNP26678 52 aa11.72□□□□□ -0.53
CDC42EP1-203ENST00000430687 TMEM170BQ5T4T1 132 aa11.72□□□□□ -0.53
CDC42EP1-203ENST00000430687 CARD19Q96LW7 228 aa11.72□□□□□ -0.53
CDC42EP1-203ENST00000430687 PET117Q6UWS5 81 aa11.71□□□□□ -0.53
CDC42EP1-203ENST00000430687 HIST3H2BBQ8N257 126 aa11.71□□□□□ -0.53
CDC42EP1-203ENST00000430687 PKIGQ9Y2B9 76 aa11.71□□□□□ -0.53
CDC42EP1-203ENST00000430687 NDUFA1O15239 70 aa11.7□□□□□ -0.54
CDC42EP1-203ENST00000430687 SPINK8P0C7L1 97 aa11.7□□□□□ -0.54
CDC42EP1-203ENST00000430687 S100A2P29034 98 aa11.7□□□□□ -0.54
CDC42EP1-203ENST00000430687 KRTAP10-1P60331 282 aa11.7□□□□□ -0.54
CDC42EP1-203ENST00000430687 RNF151Q2KHN1 245 aa11.7□□□□□ -0.54
CDC42EP1-203ENST00000430687 C6orf226Q5I0X4 101 aa11.7□□□□□ -0.54
CDC42EP1-203ENST00000430687 IGLV5-39A0A0G2JS06 123 aa11.69□□□□□ -0.54
CDC42EP1-203ENST00000430687 DPM2O94777 84 aa11.69□□□□□ -0.54
CDC42EP1-203ENST00000430687 Q6ZRU5 148 aa11.69□□□□□ -0.54
CDC42EP1-203ENST00000430687 TOMM7Q9P0U1 55 aa11.69□□□□□ -0.54
CDC42EP1-203ENST00000430687 C3orf79P0CE67 100 aa11.68□□□□□ -0.54
CDC42EP1-203ENST00000430687 CXCL5P42830 114 aa11.68□□□□□ -0.54
CDC42EP1-203ENST00000430687 LINC01620Q4KN68 170 aa11.68□□□□□ -0.54
CDC42EP1-203ENST00000430687 SDIM1Q6ZPB5 146 aa11.68□□□□□ -0.54
CDC42EP1-203ENST00000430687 COX7B2Q8TF08 81 aa11.68□□□□□ -0.54
CDC42EP1-203ENST00000430687 TMEM223A0PJW6 202 aa11.67□□□□□ -0.54
CDC42EP1-203ENST00000430687 C5orf52A6NGY3 159 aa11.67□□□□□ -0.54
CDC42EP1-203ENST00000430687 IGKCP01834 107 aa11.67□□□□□ -0.54
CDC42EP1-203ENST00000430687 CKS1BP61024 79 aa11.67□□□□□ -0.54
CDC42EP1-203ENST00000430687 SNRPEP62304 92 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms