RNA–Protein interactions for RNA: ENST00000429374.5

HDAC10-204, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-204ENST00000429374 SRSF9Q13242 221 aaKnown RBP eCLIP13.1□□□□□ -0.31
HDAC10-204ENST00000429374 NDUFA12Q9UI09 145 aa13.1□□□□□ -0.31
HDAC10-204ENST00000429374 SMIM1B2RUZ4 78 aa13.1□□□□□ -0.31
HDAC10-204ENST00000429374 SMIM13P0DJ93 91 aa13.1□□□□□ -0.31
HDAC10-204ENST00000429374 LINC00959A0A1B0GUT2 108 aa13.09□□□□□ -0.31
HDAC10-204ENST00000429374 TMEM238LA0A1B0GVL6 79 aa13.09□□□□□ -0.31
HDAC10-204ENST00000429374 A6NJY4 79 aa13.09□□□□□ -0.31
HDAC10-204ENST00000429374 TMEM238C9JI98 176 aa13.09□□□□□ -0.31
HDAC10-204ENST00000429374 C10orf126Q8N4M7 172 aa13.09□□□□□ -0.31
HDAC10-204ENST00000429374 C11orf45Q8TAV5 145 aa13.09□□□□□ -0.31
HDAC10-204ENST00000429374 A0A0J9YXY3 114 aa13.08□□□□□ -0.32
HDAC10-204ENST00000429374 A0A1B0GWB2 263 aa13.08□□□□□ -0.32
HDAC10-204ENST00000429374 NDUFA1O15239 70 aa13.08□□□□□ -0.32
HDAC10-204ENST00000429374 Q6ZTC4 211 aa13.08□□□□□ -0.32
HDAC10-204ENST00000429374 IGHV3OR16-9A0A0B4J2B5 98 aa13.07□□□□□ -0.32
HDAC10-204ENST00000429374 TIMM17BO60830 172 aa13.07□□□□□ -0.32
HDAC10-204ENST00000429374 SS18Q15532 418 aa13.07□□□□□ -0.32
HDAC10-204ENST00000429374 Q6ZVH6 145 aa13.07□□□□□ -0.32
HDAC10-204ENST00000429374 LINC01561Q8N1V8 128 aa13.07□□□□□ -0.32
HDAC10-204ENST00000429374 KRTAP21-3Q3LHN1 58 aa13.06□□□□□ -0.32
HDAC10-204ENST00000429374 IGHV3-30P01768 117 aa13.06□□□□□ -0.32
HDAC10-204ENST00000429374 IGHV3-30-5P0DP03 117 aa13.06□□□□□ -0.32
HDAC10-204ENST00000429374 LYPD5Q6UWN5 251 aa13.06□□□□□ -0.32
HDAC10-204ENST00000429374 A0A087WZ39 114 aa13.05□□□□□ -0.32
HDAC10-204ENST00000429374 C9orf118A6NHY6 69 aa13.05□□□□□ -0.32
HDAC10-204ENST00000429374 DEFB121Q5J5C9 76 aa13.05□□□□□ -0.32
HDAC10-204ENST00000429374 K7EP13 123 aa13.03□□□□□ -0.32
HDAC10-204ENST00000429374 SPANXDQ9BXN6 97 aa13.03□□□□□ -0.32
HDAC10-204ENST00000429374 NHP2Q9NX24 153 aaKnown RBP13.03□□□□□ -0.32
HDAC10-204ENST00000429374 SPANXCQ9NY87 97 aa13.03□□□□□ -0.32
HDAC10-204ENST00000429374 DEFB131BA0A096LNP1 70 aa13.02□□□□□ -0.32
HDAC10-204ENST00000429374 PRB2P02812 416 aaPredicted RBP13.02□□□□□ -0.32
HDAC10-204ENST00000429374 HERV-K104P63124 156 aa13.02□□□□□ -0.32
HDAC10-204ENST00000429374 LITAFQ99732 161 aa13.02□□□□□ -0.32
HDAC10-204ENST00000429374 NANOS2P60321 138 aaKnown RBP13.02□□□□□ -0.33
HDAC10-204ENST00000429374 SFTA2Q6UW10 78 aa13.01□□□□□ -0.33
HDAC10-204ENST00000429374 IGKV3OR2-268A0A0C4DH90 116 aa13□□□□□ -0.33
HDAC10-204ENST00000429374 CIRBPQ14011 172 aaKnown RBP13□□□□□ -0.33
HDAC10-204ENST00000429374 ZNF625Q96I27 306 aaPredicted RBP13□□□□□ -0.33
HDAC10-204ENST00000429374 TRAV10A0A0B4J240 114 aa12.99□□□□□ -0.33
HDAC10-204ENST00000429374 ANGP03950 147 aaKnown RBP12.99□□□□□ -0.33
HDAC10-204ENST00000429374 RPL24P83731 157 aaKnown RBP12.99□□□□□ -0.33
HDAC10-204ENST00000429374 LINC00269Q8N2A0 174 aa12.99□□□□□ -0.33
HDAC10-204ENST00000429374 IFITM1P13164 125 aa12.99□□□□□ -0.33
HDAC10-204ENST00000429374 REG3AQ06141 175 aa12.99□□□□□ -0.33
HDAC10-204ENST00000429374 CD164L2Q6UWJ8 174 aa12.99□□□□□ -0.33
HDAC10-204ENST00000429374 Q9H8V8 135 aa12.99□□□□□ -0.33
HDAC10-204ENST00000429374 PRR34Q9NV39 138 aa12.99□□□□□ -0.33
HDAC10-204ENST00000429374 COX7B2Q8TF08 81 aa12.98□□□□□ -0.33
HDAC10-204ENST00000429374 MIAQ16674 131 aa12.97□□□□□ -0.33
HDAC10-204ENST00000429374 C15orf53Q8NAA6 179 aa12.97□□□□□ -0.33
HDAC10-204ENST00000429374 PPDPFQ9H3Y8 114 aa12.97□□□□□ -0.33
HDAC10-204ENST00000429374 UBE2V1Q13404 147 aa12.96□□□□□ -0.33
HDAC10-204ENST00000429374 VAMP3Q15836 100 aa12.96□□□□□ -0.33
HDAC10-204ENST00000429374 MRAPQ8TCY5 172 aa12.96□□□□□ -0.33
HDAC10-204ENST00000429374 RAB37Q96AX2 223 aa12.96□□□□□ -0.33
HDAC10-204ENST00000429374 MUSTN1Q8IVN3 82 aa12.95□□□□□ -0.34
HDAC10-204ENST00000429374 COPS9Q8WXC6 57 aa12.95□□□□□ -0.34
HDAC10-204ENST00000429374 NOTCH1P46531 2555 aa12.95□□□□□ -0.34
HDAC10-204ENST00000429374 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.95□□□□□ -0.34
HDAC10-204ENST00000429374 H3BUT2 72 aa12.95□□□□□ -0.34
HDAC10-204ENST00000429374 NBEAL1Q6ZS30 2694 aa12.94□□□□□ -0.34
HDAC10-204ENST00000429374 XCL1P47992 114 aa12.94□□□□□ -0.34
HDAC10-204ENST00000429374 C5orf38Q86SI9 138 aa12.94□□□□□ -0.34
HDAC10-204ENST00000429374 CHCHD10Q8WYQ3 142 aaPredicted RBP12.94□□□□□ -0.34
HDAC10-204ENST00000429374 A0A1W2PPM0 123 aa12.93□□□□□ -0.34
HDAC10-204ENST00000429374 IGLL5B9A064 214 aa12.93□□□□□ -0.34
HDAC10-204ENST00000429374 K7ERJ3 54 aa12.93□□□□□ -0.34
HDAC10-204ENST00000429374 ADAMTSL4-AS1Q5T5F5 129 aa12.93□□□□□ -0.34
HDAC10-204ENST00000429374 TRAV8-4A0A0B4J246 113 aa12.92□□□□□ -0.34
HDAC10-204ENST00000429374 A0A0B4J2C4 111 aa12.92□□□□□ -0.34
HDAC10-204ENST00000429374 CFC1BP0CG36 223 aa12.92□□□□□ -0.34
HDAC10-204ENST00000429374 CFC1P0CG37 223 aa12.92□□□□□ -0.34
HDAC10-204ENST00000429374 ESRGQ1W209 222 aa12.92□□□□□ -0.34
HDAC10-204ENST00000429374 Q8IZM0 81 aa12.92□□□□□ -0.34
HDAC10-204ENST00000429374 B9D2Q9BPU9 175 aa12.92□□□□□ -0.34
HDAC10-204ENST00000429374 DNHD1Q96M86 4753 aa12.92□□□□□ -0.34
HDAC10-204ENST00000429374 A4D1N5 150 aa12.91□□□□□ -0.34
HDAC10-204ENST00000429374 COX7A2LO14548 114 aa12.91□□□□□ -0.34
HDAC10-204ENST00000429374 PRSS2P07478 247 aa12.91□□□□□ -0.34
HDAC10-204ENST00000429374 FABP2P12104 132 aa12.91□□□□□ -0.34
HDAC10-204ENST00000429374 CLPSL2Q6UWE3 100 aa12.91□□□□□ -0.34
HDAC10-204ENST00000429374 Q8N3U1 123 aa12.91□□□□□ -0.34
HDAC10-204ENST00000429374 TENM3Q9P273 2699 aa12.9□□□□□ -0.34
HDAC10-204ENST00000429374 GTF2H5Q6ZYL4 71 aa12.9□□□□□ -0.34
HDAC10-204ENST00000429374 PRO1854Q9UHT4 67 aa12.89□□□□□ -0.35
HDAC10-204ENST00000429374 KLK12Q9UKR0 248 aa12.89□□□□□ -0.35
HDAC10-204ENST00000429374 FOXI1Q12951 378 aa12.88□□□□□ -0.35
HDAC10-204ENST00000429374 LINC01556Q5JQF7 62 aa12.88□□□□□ -0.35
HDAC10-204ENST00000429374 ENHOQ6UWT2 76 aa12.88□□□□□ -0.35
HDAC10-204ENST00000429374 TOMM7Q9P0U1 55 aa12.88□□□□□ -0.35
HDAC10-204ENST00000429374 GAGE10A6NGK3 116 aa12.88□□□□□ -0.35
HDAC10-204ENST00000429374 IBA57-AS1B1ANH7 110 aa12.88□□□□□ -0.35
HDAC10-204ENST00000429374 APOMO95445 188 aa12.88□□□□□ -0.35
HDAC10-204ENST00000429374 CXCL5P42830 114 aa12.88□□□□□ -0.35
HDAC10-204ENST00000429374 C6orf226Q5I0X4 101 aa12.88□□□□□ -0.35
HDAC10-204ENST00000429374 MEIG1Q5JSS6 88 aa12.88□□□□□ -0.35
HDAC10-204ENST00000429374 WFDC10BQ8IUB3 73 aa12.88□□□□□ -0.35
HDAC10-204ENST00000429374 HUWE1Q7Z6Z7 4374 aaKnown RBP12.87□□□□□ -0.35
HDAC10-204ENST00000429374 PGPEP1Q9NXJ5 209 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms