RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 C11orf72Q8NBR9 251 aa3.94□□□□□ -1.78
VTI1BP4-201ENST00000427516 DEFB104AQ8WTQ1 72 aa3.94□□□□□ -1.78
VTI1BP4-201ENST00000427516 KRTAP4-5Q9BYR2 181 aa3.94□□□□□ -1.78
VTI1BP4-201ENST00000427516 OCR1Q9BZK8 76 aa3.94□□□□□ -1.78
VTI1BP4-201ENST00000427516 ARFGEF3Q5TH69 2177 aa3.93□□□□□ -1.78
VTI1BP4-201ENST00000427516 DNAJC13O75165 2243 aa3.93□□□□□ -1.78
VTI1BP4-201ENST00000427516 LCE6AA0A183 80 aa3.93□□□□□ -1.78
VTI1BP4-201ENST00000427516 G3V318 75 aa3.93□□□□□ -1.78
VTI1BP4-201ENST00000427516 HIGD2BQ4VC39 106 aa3.93□□□□□ -1.78
VTI1BP4-201ENST00000427516 C7orf65Q6ZTY9 151 aa3.93□□□□□ -1.78
VTI1BP4-201ENST00000427516 RBM12B-AS1Q9P1G2 102 aa3.93□□□□□ -1.78
VTI1BP4-201ENST00000427516 Q9UF83 564 aa3.93□□□□□ -1.78
VTI1BP4-201ENST00000427516 TRAV22A0A0B4J277 110 aa3.92□□□□□ -1.78
VTI1BP4-201ENST00000427516 MP68P56378 58 aa3.92□□□□□ -1.78
VTI1BP4-201ENST00000427516 LINC00269Q8N2A0 174 aa3.92□□□□□ -1.78
VTI1BP4-201ENST00000427516 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.92□□□□□ -1.78
VTI1BP4-201ENST00000427516 IGKV3-7A0A075B6H7 116 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 IGHV3-73A0A0B4J1V6 119 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 LOC100131303A0A0U1RQF7 123 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 M0R378 163 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 IGHV4-59P01825 116 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 APOC4P55056 127 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 FAM229BQ4G0N7 80 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 C6orf99Q4VX62 202 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 Q6ZRP5 223 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 LCA10Q71F78 164 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 SPANXA2-OT1Q8N9U9 137 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 DIRC1Q969H9 104 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 MUC4Q99102 2169 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 LINC00588Q9Y4M8 146 aa3.91□□□□□ -1.78
VTI1BP4-201ENST00000427516 CEP350Q5VT06 3117 aa3.9□□□□□ -1.78
VTI1BP4-201ENST00000427516 KNL1Q8NG31 2342 aa3.9□□□□□ -1.78
VTI1BP4-201ENST00000427516 MED13Q9UHV7 2174 aa3.9□□□□□ -1.78
VTI1BP4-201ENST00000427516 IGHV4-30-2A0A087WSY4 118 aa3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 IGHV3OR16-9A0A0B4J2B5 98 aa3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 ETDCA0A1B0GVM5 59 aa3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 PSCAO43653 123 aa3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 ZNF73O43830 326 aaPredicted RBP3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 IGHV3-11P01762 117 aa3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 CMC4P56277 68 aaPredicted RBP3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 SYCNQ0VAF6 134 aa3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 ASB16-AS1Q495Z4 193 aa3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 NKAPP1Q8N9T2 125 aa3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 LINC01356Q8N9X3 169 aa3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 C1orf64Q8NEQ6 169 aa3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 SPATA3Q8NHX4 192 aa3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 Q9BRP9 147 aa3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 PLA2G2DQ9UNK4 145 aa3.9□□□□□ -1.79
VTI1BP4-201ENST00000427516 TRGV2A0A075B6R0 118 aa3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 A0A087X002 238 aa3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 IGHV4-28A0A0C4DH34 117 aa3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 CHKB-CPT1BH3BT56 60 aa3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 IGKV3-20P01619 116 aa3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 IGKV4-1P06312 121 aa3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 KRTAP10-2P60368 255 aa3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 LMO4P61968 165 aa3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 Q6ZTI0 123 aa3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 Q75L30 129 aa3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 TMEM105Q8N8V8 129 aa3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 BBC3Q96PG8 261 aaPredicted RBP3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 CELA1Q9UNI1 258 aa3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 PLXNB1O43157 2135 aa3.89□□□□□ -1.79
VTI1BP4-201ENST00000427516 ZGRF1Q86YA3 2104 aa3.88□□□□□ -1.79
VTI1BP4-201ENST00000427516 PSPHP1O15172 72 aa3.88□□□□□ -1.79
VTI1BP4-201ENST00000427516 HTN1P15515 57 aa3.88□□□□□ -1.79
VTI1BP4-201ENST00000427516 PRB3Q04118 309 aaPredicted RBP3.88□□□□□ -1.79
VTI1BP4-201ENST00000427516 FBXL19-AS1Q494R0 122 aa3.88□□□□□ -1.79
VTI1BP4-201ENST00000427516 Q6ZQY7 126 aa3.88□□□□□ -1.79
VTI1BP4-201ENST00000427516 HIGD2AQ9BW72 106 aa3.88□□□□□ -1.79
VTI1BP4-201ENST00000427516 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
VTI1BP4-201ENST00000427516 SVILO95425 2214 aa3.88□□□□□ -1.79
VTI1BP4-201ENST00000427516 KIAA0100Q14667 2235 aaKnown RBP3.87□□□□□ -1.79
VTI1BP4-201ENST00000427516 PATE3B3GLJ2 98 aa3.87□□□□□ -1.79
VTI1BP4-201ENST00000427516 HCG22E2RYF7 251 aa3.87□□□□□ -1.79
VTI1BP4-201ENST00000427516 PLA2G1BP04054 148 aaKnown RBP3.87□□□□□ -1.79
VTI1BP4-201ENST00000427516 PLA2G2AP14555 144 aa3.87□□□□□ -1.79
VTI1BP4-201ENST00000427516 ZFP36P26651 326 aaKnown RBP3.87□□□□□ -1.79
VTI1BP4-201ENST00000427516 DEFB1P60022 68 aa3.87□□□□□ -1.79
VTI1BP4-201ENST00000427516 DEFB109BQ30KR1 87 aa3.87□□□□□ -1.79
VTI1BP4-201ENST00000427516 ATP1A1-AS1Q5TC04 95 aa3.87□□□□□ -1.79
VTI1BP4-201ENST00000427516 ZNF843Q8N446 348 aa3.87□□□□□ -1.79
VTI1BP4-201ENST00000427516 B9D2Q9BPU9 175 aa3.87□□□□□ -1.79
VTI1BP4-201ENST00000427516 HTTP42858 3142 aa3.86□□□□□ -1.79
VTI1BP4-201ENST00000427516 WDR87Q6ZQQ6 2873 aa3.86□□□□□ -1.79
VTI1BP4-201ENST00000427516 TRGV1A0A0A0MS02 117 aa3.86□□□□□ -1.79
VTI1BP4-201ENST00000427516 LINC00959A0A1B0GUT2 108 aa3.86□□□□□ -1.79
VTI1BP4-201ENST00000427516 A0A1B0GUV1 79 aa3.86□□□□□ -1.79
VTI1BP4-201ENST00000427516 A6NED7 52 aa3.86□□□□□ -1.79
VTI1BP4-201ENST00000427516 IGLV6-57P01721 117 aa3.86□□□□□ -1.79
VTI1BP4-201ENST00000427516 SLURP1P55000 103 aa3.86□□□□□ -1.79
VTI1BP4-201ENST00000427516 SPTSSBQ8NFR3 76 aa3.86□□□□□ -1.79
VTI1BP4-201ENST00000427516 C16orf74Q96GX8 76 aa3.86□□□□□ -1.79
VTI1BP4-201ENST00000427516 LINC00208Q96KT6 92 aa3.86□□□□□ -1.79
VTI1BP4-201ENST00000427516 UBE2E2Q96LR5 201 aa3.86□□□□□ -1.79
VTI1BP4-201ENST00000427516 IGHV4-61A0A0C4DH41 118 aa3.85□□□□□ -1.79
VTI1BP4-201ENST00000427516 LOC101927531A0A1B0GV80 90 aa3.85□□□□□ -1.79
VTI1BP4-201ENST00000427516 LYNX1G3V0Z9 82 aa3.85□□□□□ -1.79
VTI1BP4-201ENST00000427516 LYNX1P0DP58 116 aa3.85□□□□□ -1.79
VTI1BP4-201ENST00000427516 PROK1P58294 105 aa3.85□□□□□ -1.79
VTI1BP4-201ENST00000427516 NANOS2P60321 138 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms