RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 TINCRA0A1B0GVN0 87 aa11.74□□□□□ -0.53
PKP4-205ENST00000426248 ATP5G1P05496 136 aa11.74□□□□□ -0.53
PKP4-205ENST00000426248 INAFM2P0DMQ5 153 aa11.74□□□□□ -0.53
PKP4-205ENST00000426248 CR1P17927 2039 aa11.74□□□□□ -0.53
PKP4-205ENST00000426248 ADAMTSL4-AS1Q5T5F5 129 aa11.74□□□□□ -0.53
PKP4-205ENST00000426248 COX8CQ7Z4L0 72 aa11.73□□□□□ -0.53
PKP4-205ENST00000426248 SMCR5Q8TEV8 140 aa11.73□□□□□ -0.53
PKP4-205ENST00000426248 NF1P21359 2839 aa11.73□□□□□ -0.53
PKP4-205ENST00000426248 POM121L12Q8N7R1 296 aa11.72□□□□□ -0.53
PKP4-205ENST00000426248 TMEM258P61165 79 aa11.72□□□□□ -0.53
PKP4-205ENST00000426248 ZNF575Q86XF7 245 aa11.71□□□□□ -0.53
PKP4-205ENST00000426248 C20orf173Q96LM9 149 aa11.71□□□□□ -0.53
PKP4-205ENST00000426248 SPANXDQ9BXN6 97 aa11.71□□□□□ -0.53
PKP4-205ENST00000426248 DPH3Q96FX2 82 aa11.71□□□□□ -0.53
PKP4-205ENST00000426248 A0A0U1RQV1 116 aa11.71□□□□□ -0.54
PKP4-205ENST00000426248 TIRAPP58753 221 aa11.71□□□□□ -0.54
PKP4-205ENST00000426248 TMEM243Q9BU79 118 aa11.71□□□□□ -0.54
PKP4-205ENST00000426248 C14orf132Q9NPU4 83 aa11.71□□□□□ -0.54
PKP4-205ENST00000426248 MIAQ16674 131 aa11.7□□□□□ -0.54
PKP4-205ENST00000426248 CSMD2Q7Z408 3487 aa11.69□□□□□ -0.54
PKP4-205ENST00000426248 RPL18AQ02543 176 aaKnown RBP11.69□□□□□ -0.54
PKP4-205ENST00000426248 C9orf47Q6ZRZ4 202 aa11.68□□□□□ -0.54
PKP4-205ENST00000426248 SPANXCQ9NY87 97 aa11.68□□□□□ -0.54
PKP4-205ENST00000426248 CLPSL2Q6UWE3 100 aa11.68□□□□□ -0.54
PKP4-205ENST00000426248 C20orf197Q8N268 126 aa11.67□□□□□ -0.54
PKP4-205ENST00000426248 SERP2Q8N6R1 65 aa11.67□□□□□ -0.54
PKP4-205ENST00000426248 AMELXQ99217 191 aa11.67□□□□□ -0.54
PKP4-205ENST00000426248 IGHV4-4A0A075B6R2 117 aa11.67□□□□□ -0.54
PKP4-205ENST00000426248 CRYGAP11844 174 aa11.67□□□□□ -0.54
PKP4-205ENST00000426248 ZNF415Q09FC8 603 aa11.67□□□□□ -0.54
PKP4-205ENST00000426248 HIVEP1P15822 2718 aa11.66□□□□□ -0.54
PKP4-205ENST00000426248 TRAV23DV6A0A075B6W5 121 aa11.66□□□□□ -0.54
PKP4-205ENST00000426248 TRGV4A0A0C4DH28 118 aa11.66□□□□□ -0.54
PKP4-205ENST00000426248 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.66□□□□□ -0.54
PKP4-205ENST00000426248 PRM2P04554 102 aa11.66□□□□□ -0.54
PKP4-205ENST00000426248 KRTAP1-1Q07627 177 aa11.66□□□□□ -0.54
PKP4-205ENST00000426248 U3KQE9 123 aa11.66□□□□□ -0.54
PKP4-205ENST00000426248 USP17L23D6RBM5 183 aa11.66□□□□□ -0.54
PKP4-205ENST00000426248 PFN2P35080 140 aa11.66□□□□□ -0.54
PKP4-205ENST00000426248 PRIMA1Q86XR5 153 aa11.66□□□□□ -0.54
PKP4-205ENST00000426248 MRPL53Q96EL3 112 aaKnown RBP11.66□□□□□ -0.54
PKP4-205ENST00000426248 Q9H8V8 135 aa11.66□□□□□ -0.54
PKP4-205ENST00000426248 MXRA5Q9NR99 2828 aa11.65□□□□□ -0.54
PKP4-205ENST00000426248 COX7A2LO14548 114 aa11.65□□□□□ -0.55
PKP4-205ENST00000426248 CSMD1Q96PZ7 3565 aa11.65□□□□□ -0.55
PKP4-205ENST00000426248 IGHV1-58A0A0C4DH39 117 aa11.64□□□□□ -0.55
PKP4-205ENST00000426248 RBMY1BA6NDE4 496 aaKnown RBP11.64□□□□□ -0.55
PKP4-205ENST00000426248 RBMY1EA6NEQ0 496 aaKnown RBP11.64□□□□□ -0.55
PKP4-205ENST00000426248 RBMY1DP0C7P1 496 aaKnown RBP11.64□□□□□ -0.55
PKP4-205ENST00000426248 RBMY1A1P0DJD3 496 aaKnown RBP11.64□□□□□ -0.55
PKP4-205ENST00000426248 RBMY1CP0DJD4 496 aa11.64□□□□□ -0.55
PKP4-205ENST00000426248 POLR2KP53803 58 aaKnown RBP11.64□□□□□ -0.55
PKP4-205ENST00000426248 RBMY1FQ15415 496 aaKnown RBP11.64□□□□□ -0.55
PKP4-205ENST00000426248 CYSTM1Q9H1C7 97 aa11.64□□□□□ -0.55
PKP4-205ENST00000426248 IGLV4-3A0A075B6K6 122 aa11.64□□□□□ -0.55
PKP4-205ENST00000426248 RPS28P62857 69 aaKnown RBP11.64□□□□□ -0.55
PKP4-205ENST00000426248 C20orf203Q8NBC4 194 aa11.64□□□□□ -0.55
PKP4-205ENST00000426248 BRK1Q8WUW1 75 aa11.64□□□□□ -0.55
PKP4-205ENST00000426248 FAM19A4Q96LR4 140 aa11.64□□□□□ -0.55
PKP4-205ENST00000426248 PYGO1Q9Y3Y4 419 aa11.64□□□□□ -0.55
PKP4-205ENST00000426248 RNASE3P12724 160 aaKnown RBP11.63□□□□□ -0.55
PKP4-205ENST00000426248 DEFB114Q30KQ6 69 aa11.63□□□□□ -0.55
PKP4-205ENST00000426248 ZFAND2AQ8N6M9 145 aa11.63□□□□□ -0.55
PKP4-205ENST00000426248 WFDC9Q8NEX5 89 aa11.63□□□□□ -0.55
PKP4-205ENST00000426248 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.63□□□□□ -0.55
PKP4-205ENST00000426248 IGKV2-29A2NJV5 120 aaPredicted RBP11.63□□□□□ -0.55
PKP4-205ENST00000426248 K7EQG2 157 aa11.63□□□□□ -0.55
PKP4-205ENST00000426248 GHRHP01286 108 aa11.63□□□□□ -0.55
PKP4-205ENST00000426248 MRAPQ8TCY5 172 aa11.62□□□□□ -0.55
PKP4-205ENST00000426248 CRPP02741 224 aa11.62□□□□□ -0.55
PKP4-205ENST00000426248 CXCL5P42830 114 aa11.62□□□□□ -0.55
PKP4-205ENST00000426248 A0A0J9YX75 114 aa11.61□□□□□ -0.55
PKP4-205ENST00000426248 DCANP1Q8TF63 244 aa11.6□□□□□ -0.55
PKP4-205ENST00000426248 MALP21145 153 aa11.6□□□□□ -0.55
PKP4-205ENST00000426248 LINC00158P58513 81 aa11.6□□□□□ -0.55
PKP4-205ENST00000426248 Q8N2B8 174 aa11.6□□□□□ -0.55
PKP4-205ENST00000426248 SOCS3O14543 225 aa11.59□□□□□ -0.55
PKP4-205ENST00000426248 INSP01308 110 aa11.59□□□□□ -0.55
PKP4-205ENST00000426248 COPS9Q8WXC6 57 aa11.59□□□□□ -0.55
PKP4-205ENST00000426248 COL6A5A8TX70 2615 aa11.59□□□□□ -0.55
PKP4-205ENST00000426248 IGHV1OR15-1A0A075B7D0 117 aa11.59□□□□□ -0.55
PKP4-205ENST00000426248 LENEPQ9Y5L5 61 aa11.59□□□□□ -0.55
PKP4-205ENST00000426248 MAP6D1Q9H9H5 199 aa11.58□□□□□ -0.55
PKP4-205ENST00000426248 NBEAL2Q6ZNJ1 2754 aa11.58□□□□□ -0.56
PKP4-205ENST00000426248 WIPF1O43516 503 aa11.58□□□□□ -0.56
PKP4-205ENST00000426248 RBM3P98179 157 aaKnown RBP11.58□□□□□ -0.56
PKP4-205ENST00000426248 NIPBLQ6KC79 2804 aaeCLIP11.58□□□□□ -0.565e-6■□□□□ 8.1
PKP4-205ENST00000426248 TRBV27A0A0K0K1C4 114 aa11.58□□□□□ -0.56
PKP4-205ENST00000426248 DEFB4AO15263 64 aa11.58□□□□□ -0.56
PKP4-205ENST00000426248 VSIG2Q96IQ7 327 aa11.58□□□□□ -0.56
PKP4-205ENST00000426248 FAM236DA0A1B0GTK5 79 aa11.57□□□□□ -0.56
PKP4-205ENST00000426248 FAM236CP0DP71 79 aa11.57□□□□□ -0.56
PKP4-205ENST00000426248 WFDC10AQ9H1F0 79 aa11.57□□□□□ -0.56
PKP4-205ENST00000426248 PROK1P58294 105 aa11.57□□□□□ -0.56
PKP4-205ENST00000426248 NOTCH1P46531 2555 aa11.57□□□□□ -0.56
PKP4-205ENST00000426248 LINC00308Q8TCZ7 52 aa11.57□□□□□ -0.56
PKP4-205ENST00000426248 CDKN2A-AS1Q9UH64 79 aa11.56□□□□□ -0.56
PKP4-205ENST00000426248 PIK3CD-AS1Q5SR53 167 aa11.56□□□□□ -0.56
PKP4-205ENST00000426248 NCR3O14931 201 aa11.56□□□□□ -0.56
PKP4-205ENST00000426248 PAX4O43316 350 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms