RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 DEFB124Q8NES8 71 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 C7orf33Q8WU49 177 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 DNAJC30Q96LL9 226 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 LINC00167Q96N53 147 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 PRORYQ9H606 182 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 DAZ1Q9NQZ3 744 aaKnown RBP1.77□□□□□ -2.13
VPS41-206ENST00000418457 CSDC2Q9Y534 153 aaKnown RBP1.77□□□□□ -2.13
VPS41-206ENST00000418457 ZFYVE26Q68DK2 2539 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 NBPF19A0A087WUL8 3843 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 COL12A1Q99715 3063 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 CFAP46Q8IYW2 2715 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 ARHGAP32A7KAX9 2087 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 CEP250Q9BV73 2442 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 IGHV3OR16-8A0A075B7F1 116 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 IGHV3-66A0A0C4DH42 116 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 LYNX1G3V0Z9 82 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 J3KT08 172 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 M0QY20 66 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 NPFFO15130 113 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 NDUFA1O15239 70 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 GNRH2O43555 120 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 PRB1P04280 392 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 LYNX1P0DP58 116 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 PRB4P10163 310 aaPredicted RBP1.76□□□□□ -2.13
VPS41-206ENST00000418457 CD28P10747 220 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 EMP1P54849 157 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 SNRPD3P62318 126 aaKnown RBP1.76□□□□□ -2.13
VPS41-206ENST00000418457 RPL39P62891 51 aaKnown RBP1.76□□□□□ -2.13
VPS41-206ENST00000418457 HERVK_113P63121 156 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 PRB3Q04118 309 aaPredicted RBP1.76□□□□□ -2.13
VPS41-206ENST00000418457 C9orf153Q5TBE3 101 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 SDIM1Q6ZPB5 146 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 FAM19A3Q7Z5A8 133 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 C3orf22Q8N5N4 141 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 LINC00526Q96FQ7 95 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 NDUFA12Q9UI09 145 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 ABCA1O95477 2261 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 IGSF10Q6WRI0 2623 aa1.76□□□□□ -2.13
VPS41-206ENST00000418457 URB1O60287 2271 aaKnown RBP1.75□□□□□ -2.13
VPS41-206ENST00000418457 MUC4Q99102 2169 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 ACACBO00763 2458 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 IGF2RP11717 2491 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 IGHV3OR16-13A0A075B7E8 117 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 IGHV3-49A0A0A0MS15 119 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 TRAV8-3A0A0A6YYJ7 113 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 IGHV3-74A0A0B4J1X5 117 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 TRAV13-2A0A0B4J235 113 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 A0A0J9YXV3 536 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 FAM236AA0A1B0GUQ0 79 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 FAM236BA0A1B0GV22 79 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 G3V318 75 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 H7C2G1 150 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 PANO1I0J062 215 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 IGHG2P01859 326 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 CRYGAP11844 174 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 COX7CP15954 63 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 APOC4P55056 127 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 TMEM258P61165 79 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 S100A7L2Q5SY68 101 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 FAM74A4Q5TZK3 123 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 ATP5EP2Q5VTU8 51 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 Q6ZQT7 251 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 C5orf38Q86SI9 138 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 OR13C6PQ8NH95 151 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 DCANP1Q8TF63 244 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 LINC01587Q99440 93 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 LINC00467Q9BRT7 94 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 RHPN1-AS1Q9BWJ2 59 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 VPREB3Q9UKI3 123 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 BOD1L1Q8NFC6 3051 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 PKD1L2Q7Z442 2459 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 DNHD1Q96M86 4753 aa1.75□□□□□ -2.13
VPS41-206ENST00000418457 MGAQ8IWI9 3026 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 CACNA1BQ00975 2339 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 AKAP9Q99996 3911 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 EP300Q09472 2414 aaPredicted RBP1.74□□□□□ -2.13
VPS41-206ENST00000418457 TRAV12-3A0A0B4J271 114 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 A8MTW9 85 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 NDUFC2-KCTD14E9PQ53 114 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 H0YGX0 51 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 DNAL4O96015 105 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 HIST1H4AP62805 103 aaKnown RBP1.74□□□□□ -2.13
VPS41-206ENST00000418457 Q6JHZ5 121 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 UNQ9165/PRO28630Q6UXU0 137 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 LINC01560Q8TB33 94 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 LINC00308Q8TCZ7 52 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 CLEC2BQ92478 149 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 LINC00527Q9UJ94 153 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 UBE2D4Q9Y2X8 147 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 CSMD1Q96PZ7 3565 aa1.74□□□□□ -2.13
VPS41-206ENST00000418457 ANKRD11Q6UB99 2663 aaPredicted RBP1.73□□□□□ -2.13
VPS41-206ENST00000418457 PKDREJQ9NTG1 2253 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 RIF1Q5UIP0 2472 aaKnown RBP1.73□□□□□ -2.13
VPS41-206ENST00000418457 IGHV3-64A0A075B6Q5 118 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 TRBV10-1A0A0K0K1A3 114 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 A6NDX4 124 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 SMIM9A6NGZ8 99 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 F6UB75 175 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 CCL21O00585 134 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 BCE1O60756 84 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms