RNA–Protein interactions for RNA: ENST00000418381.5

UBR3-203, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 7,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-203ENST00000418381 IGLC6P0CF74 106 aa13.09□□□□□ -0.31
UBR3-203ENST00000418381 FRMD6-AS1P0C7T7 363 aa13.09□□□□□ -0.31
UBR3-203ENST00000418381 TRBV6-4A0A1B0GX49 114 aa13.09□□□□□ -0.31
UBR3-203ENST00000418381 SBSPONQ8IVN8 264 aa13.08□□□□□ -0.32
UBR3-203ENST00000418381 ODF3Q96PU9 254 aa13.08□□□□□ -0.32
UBR3-203ENST00000418381 TRBV7-6A0A0J9YX20 115 aa13.08□□□□□ -0.32
UBR3-203ENST00000418381 IGLV4-3A0A075B6K6 122 aa13.07□□□□□ -0.32
UBR3-203ENST00000418381 C10orf91Q5T1B1 145 aa13.07□□□□□ -0.32
UBR3-203ENST00000418381 NOTCH2Q04721 2471 aa13.07□□□□□ -0.32
UBR3-203ENST00000418381 Q6ZQY7 126 aa13.07□□□□□ -0.32
UBR3-203ENST00000418381 LST1O00453 97 aa13.07□□□□□ -0.32
UBR3-203ENST00000418381 NUPR1O60356 82 aa13.07□□□□□ -0.32
UBR3-203ENST00000418381 CELA1Q9UNI1 258 aa13.06□□□□□ -0.32
UBR3-203ENST00000418381 MSMPQ1L6U9 139 aa13.06□□□□□ -0.32
UBR3-203ENST00000418381 LINC00308Q8TCZ7 52 aa13.06□□□□□ -0.32
UBR3-203ENST00000418381 LINC00643Q86TS7 51 aa13.06□□□□□ -0.32
UBR3-203ENST00000418381 TRBV27A0A0K0K1C4 114 aa13.05□□□□□ -0.32
UBR3-203ENST00000418381 C2orf48Q96LS8 159 aa13.05□□□□□ -0.32
UBR3-203ENST00000418381 DEFB116Q30KQ4 102 aa13.04□□□□□ -0.32
UBR3-203ENST00000418381 Q6ZS46 218 aa13.04□□□□□ -0.32
UBR3-203ENST00000418381 LINC00959A0A1B0GUT2 108 aa13.03□□□□□ -0.32
UBR3-203ENST00000418381 J3QL48 77 aa13.03□□□□□ -0.32
UBR3-203ENST00000418381 PSMG3-AS1Q96PY0 264 aa13.03□□□□□ -0.32
UBR3-203ENST00000418381 KRTAP27-1Q3LI81 207 aa13.03□□□□□ -0.32
UBR3-203ENST00000418381 A0A1B0GXF2 115 aa13.03□□□□□ -0.32
UBR3-203ENST00000418381 FAM19A3Q7Z5A8 133 aa13.03□□□□□ -0.32
UBR3-203ENST00000418381 V9GYY9 64 aa13.03□□□□□ -0.32
UBR3-203ENST00000418381 LRRK2Q5S007 2527 aa13.03□□□□□ -0.32
UBR3-203ENST00000418381 CUL9Q8IWT3 2517 aa13.03□□□□□ -0.32
UBR3-203ENST00000418381 TIMM17BO60830 172 aa13.02□□□□□ -0.33
UBR3-203ENST00000418381 PRLHP81277 87 aa13.02□□□□□ -0.33
UBR3-203ENST00000418381 C9orf116Q5BN46 136 aaPredicted RBP13.01□□□□□ -0.33
UBR3-203ENST00000418381 Q6ZTC4 211 aa13.01□□□□□ -0.33
UBR3-203ENST00000418381 PCOTHQ58A44 107 aa13.01□□□□□ -0.33
UBR3-203ENST00000418381 HIGD1BQ9P298 99 aa13.01□□□□□ -0.33
UBR3-203ENST00000418381 SMIM11BQ8TCY0 68 aa13□□□□□ -0.33
UBR3-203ENST00000418381 LTBP2Q14767 1821 aa13□□□□□ -0.33
UBR3-203ENST00000418381 M0QY20 66 aa12.99□□□□□ -0.33
UBR3-203ENST00000418381 CYSRT1A8MQ03 144 aa12.99□□□□□ -0.33
UBR3-203ENST00000418381 SPRY4Q9C004 299 aa12.99□□□□□ -0.33
UBR3-203ENST00000418381 FAM229AH3BQW9 127 aa12.99□□□□□ -0.33
UBR3-203ENST00000418381 TRIAP1O43715 76 aa12.98□□□□□ -0.33
UBR3-203ENST00000418381 ZNF73O43830 326 aaPredicted RBP12.98□□□□□ -0.33
UBR3-203ENST00000418381 IGKV2D-30A0A075B6S6 120 aa12.98□□□□□ -0.33
UBR3-203ENST00000418381 IGKV2-30P06310 120 aa12.98□□□□□ -0.33
UBR3-203ENST00000418381 PYGO1Q9Y3Y4 419 aa12.98□□□□□ -0.33
UBR3-203ENST00000418381 MRGPRG-AS1Q2M3A8 158 aa12.97□□□□□ -0.33
UBR3-203ENST00000418381 Q9BRP9 147 aa12.97□□□□□ -0.33
UBR3-203ENST00000418381 C7orf65Q6ZTY9 151 aa12.97□□□□□ -0.33
UBR3-203ENST00000418381 SPACA4Q8TDM5 124 aa12.97□□□□□ -0.33
UBR3-203ENST00000418381 SERTAD4-AS1Q5TG53 156 aa12.96□□□□□ -0.33
UBR3-203ENST00000418381 COX6A2Q02221 97 aa12.96□□□□□ -0.33
UBR3-203ENST00000418381 ZNF22P17026 224 aaPredicted RBP12.95□□□□□ -0.34
UBR3-203ENST00000418381 LINC01547P58512 204 aaPredicted RBP12.95□□□□□ -0.34
UBR3-203ENST00000418381 COX17Q14061 63 aa12.94□□□□□ -0.34
UBR3-203ENST00000418381 LINC00208Q96KT6 92 aa12.93□□□□□ -0.34
UBR3-203ENST00000418381 LIMD2Q9BT23 127 aa12.92□□□□□ -0.34
UBR3-203ENST00000418381 KRTAP10-9P60411 292 aa12.92□□□□□ -0.34
UBR3-203ENST00000418381 C11orf71Q6IPW1 123 aa12.92□□□□□ -0.34
UBR3-203ENST00000418381 NDUFA7O95182 113 aa12.91□□□□□ -0.34
UBR3-203ENST00000418381 PRR3P79522 188 aaKnown RBP12.91□□□□□ -0.34
UBR3-203ENST00000418381 COA6Q5JTJ3 125 aaKnown RBP12.91□□□□□ -0.34
UBR3-203ENST00000418381 UNQ6190/PRO20217Q6UXQ8 127 aa12.91□□□□□ -0.34
UBR3-203ENST00000418381 ACACBO00763 2458 aa12.9□□□□□ -0.34
UBR3-203ENST00000418381 ATP5EP2Q5VTU8 51 aa12.9□□□□□ -0.34
UBR3-203ENST00000418381 EDN2P20800 178 aa12.89□□□□□ -0.35
UBR3-203ENST00000418381 MYO18BQ8IUG5 2567 aa12.88□□□□□ -0.35
UBR3-203ENST00000418381 MT-ATP8P03928 68 aa12.88□□□□□ -0.35
UBR3-203ENST00000418381 C16orf90A8MZG2 172 aa12.87□□□□□ -0.35
UBR3-203ENST00000418381 UQCRQO14949 82 aa12.87□□□□□ -0.35
UBR3-203ENST00000418381 TSHBP01222 138 aa12.87□□□□□ -0.35
UBR3-203ENST00000418381 BEAN1Q3B7T3 259 aa12.87□□□□□ -0.35
UBR3-203ENST00000418381 CRIP2P52943 208 aaPredicted RBP12.85□□□□□ -0.35
UBR3-203ENST00000418381 EBI3Q14213 229 aa12.85□□□□□ -0.35
UBR3-203ENST00000418381 NDUFC1O43677 76 aa12.85□□□□□ -0.35
UBR3-203ENST00000418381 TRBV30A0A0K0K1B3 111 aa12.85□□□□□ -0.35
UBR3-203ENST00000418381 NHLRC4P0CG21 123 aaPredicted RBP12.85□□□□□ -0.35
UBR3-203ENST00000418381 MYO9AB2RTY4 2548 aa12.84□□□□□ -0.35
UBR3-203ENST00000418381 MDFIQ99750 246 aa12.84□□□□□ -0.35
UBR3-203ENST00000418381 CRYGAP11844 174 aa12.84□□□□□ -0.35
UBR3-203ENST00000418381 CSDC2Q9Y534 153 aaKnown RBP12.83□□□□□ -0.35
UBR3-203ENST00000418381 TRBV10-3A0A0K0K1G6 114 aa12.83□□□□□ -0.36
UBR3-203ENST00000418381 ATP5EP56381 51 aaPredicted RBP12.83□□□□□ -0.36
UBR3-203ENST00000418381 COX6B2Q6YFQ2 88 aa12.83□□□□□ -0.36
UBR3-203ENST00000418381 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.83□□□□□ -0.36
UBR3-203ENST00000418381 MAPKAPK5-AS1Q8N8E1 139 aa12.82□□□□□ -0.36
UBR3-203ENST00000418381 CRIP1P50238 77 aa12.82□□□□□ -0.36
UBR3-203ENST00000418381 ZFYVE26Q68DK2 2539 aa12.82□□□□□ -0.36
UBR3-203ENST00000418381 H0Y9P7 68 aa12.82□□□□□ -0.36
UBR3-203ENST00000418381 hDV103S1A0JD37 113 aa12.81□□□□□ -0.36
UBR3-203ENST00000418381 C1orf229Q6ZS94 237 aaPredicted RBP12.81□□□□□ -0.36
UBR3-203ENST00000418381 Q8IZM0 81 aa12.81□□□□□ -0.36
UBR3-203ENST00000418381 RNASE3P12724 160 aaKnown RBP12.8□□□□□ -0.36
UBR3-203ENST00000418381 CDSNQ15517 529 aa12.8□□□□□ -0.36
UBR3-203ENST00000418381 ANKHD1Q8IWZ3 2542 aaKnown RBP12.8□□□□□ -0.36
UBR3-203ENST00000418381 COL27A1Q8IZC6 1860 aaPredicted RBP12.8□□□□□ -0.36
UBR3-203ENST00000418381 HCG22E2RYF7 251 aa12.8□□□□□ -0.36
UBR3-203ENST00000418381 MRPS12O15235 138 aaKnown RBP12.8□□□□□ -0.36
UBR3-203ENST00000418381 CHTF8P0CG12 524 aa12.79□□□□□ -0.36
UBR3-203ENST00000418381 SOSTDC1Q6X4U4 206 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms