RNA–Protein interactions for RNA: ENST00000415993.5

HDAC10-203, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-203ENST00000415993 IGLV4-60A0A075B6I1 120 aa12.01□□□□□ -0.49
HDAC10-203ENST00000415993 C10orf126Q8N4M7 172 aa12.01□□□□□ -0.49
HDAC10-203ENST00000415993 RETNQ9HD89 108 aa12.01□□□□□ -0.49
HDAC10-203ENST00000415993 SPANXB1Q9NS25 103 aaPredicted RBP12□□□□□ -0.49
HDAC10-203ENST00000415993 A0A096LPF7 62 aa12□□□□□ -0.49
HDAC10-203ENST00000415993 TRAV26-1A0A087WT03 109 aa11.99□□□□□ -0.49
HDAC10-203ENST00000415993 IGLL5B9A064 214 aa11.99□□□□□ -0.49
HDAC10-203ENST00000415993 SRSF9Q13242 221 aaKnown RBP eCLIP11.99□□□□□ -0.49
HDAC10-203ENST00000415993 IGLV5-39A0A0G2JS06 123 aa11.98□□□□□ -0.49
HDAC10-203ENST00000415993 F5H768 121 aa11.98□□□□□ -0.49
HDAC10-203ENST00000415993 C12orf74Q32Q52 190 aa11.98□□□□□ -0.49
HDAC10-203ENST00000415993 NOTCH1P46531 2555 aa11.97□□□□□ -0.49
HDAC10-203ENST00000415993 A0A0J9YXY3 114 aa11.97□□□□□ -0.49
HDAC10-203ENST00000415993 TEX48A0A1B0GUV7 120 aa11.97□□□□□ -0.49
HDAC10-203ENST00000415993 A0A1B0GWB2 263 aa11.97□□□□□ -0.49
HDAC10-203ENST00000415993 IGHV3-30P01768 117 aa11.97□□□□□ -0.49
HDAC10-203ENST00000415993 IGHV3-30-5P0DP03 117 aa11.97□□□□□ -0.49
HDAC10-203ENST00000415993 ZFAND6Q6FIF0 208 aa11.97□□□□□ -0.49
HDAC10-203ENST00000415993 NDUFA12Q9UI09 145 aa11.96□□□□□ -0.49
HDAC10-203ENST00000415993 A0A1B0GUV1 79 aa11.96□□□□□ -0.5
HDAC10-203ENST00000415993 SMIM1B2RUZ4 78 aa11.96□□□□□ -0.5
HDAC10-203ENST00000415993 RPL24P83731 157 aaKnown RBP11.96□□□□□ -0.5
HDAC10-203ENST00000415993 HTN3P15516 51 aa11.94□□□□□ -0.5
HDAC10-203ENST00000415993 LITAFQ99732 161 aa11.94□□□□□ -0.5
HDAC10-203ENST00000415993 NBEAL1Q6ZS30 2694 aa11.94□□□□□ -0.5
HDAC10-203ENST00000415993 TENM3Q9P273 2699 aa11.93□□□□□ -0.5
HDAC10-203ENST00000415993 C11orf68Q9H3H3 251 aaKnown RBP11.93□□□□□ -0.5
HDAC10-203ENST00000415993 TMEM262E9PQX1 116 aa11.92□□□□□ -0.5
HDAC10-203ENST00000415993 WFDC2Q14508 124 aa11.92□□□□□ -0.5
HDAC10-203ENST00000415993 MRPL23Q16540 153 aaKnown RBP11.92□□□□□ -0.5
HDAC10-203ENST00000415993 F8W1H4 67 aa11.92□□□□□ -0.5
HDAC10-203ENST00000415993 IGKV3OR2-268A0A0C4DH90 116 aa11.91□□□□□ -0.5
HDAC10-203ENST00000415993 IGHV3OR16-9A0A0B4J2B5 98 aa11.91□□□□□ -0.5
HDAC10-203ENST00000415993 H3BMG7 143 aa11.91□□□□□ -0.5
HDAC10-203ENST00000415993 NDUFA1O15239 70 aa11.91□□□□□ -0.5
HDAC10-203ENST00000415993 TMEM238LA0A1B0GVL6 79 aa11.9□□□□□ -0.5
HDAC10-203ENST00000415993 A6NJY4 79 aa11.9□□□□□ -0.5
HDAC10-203ENST00000415993 LINC00959A0A1B0GUT2 108 aa11.9□□□□□ -0.51
HDAC10-203ENST00000415993 ADAMTSL4-AS1Q5T5F5 129 aa11.9□□□□□ -0.51
HDAC10-203ENST00000415993 ICOSQ9Y6W8 199 aa11.9□□□□□ -0.51
HDAC10-203ENST00000415993 PRB2P02812 416 aaPredicted RBP11.89□□□□□ -0.51
HDAC10-203ENST00000415993 SH2D6Q7Z4S9 175 aa11.89□□□□□ -0.51
HDAC10-203ENST00000415993 PRO0461Q9UI25 63 aa11.88□□□□□ -0.51
HDAC10-203ENST00000415993 Q6ZTC4 211 aa11.87□□□□□ -0.51
HDAC10-203ENST00000415993 MUSTN1Q8IVN3 82 aa11.87□□□□□ -0.51
HDAC10-203ENST00000415993 Q8N3U1 123 aa11.87□□□□□ -0.51
HDAC10-203ENST00000415993 A0A0J9YWU9 116 aa11.87□□□□□ -0.51
HDAC10-203ENST00000415993 ZNF625Q96I27 306 aaPredicted RBP11.87□□□□□ -0.51
HDAC10-203ENST00000415993 Q9H8V8 135 aa11.87□□□□□ -0.51
HDAC10-203ENST00000415993 CFC1BP0CG36 223 aa11.86□□□□□ -0.51
HDAC10-203ENST00000415993 CFC1P0CG37 223 aa11.86□□□□□ -0.51
HDAC10-203ENST00000415993 SPANXDQ9BXN6 97 aa11.86□□□□□ -0.51
HDAC10-203ENST00000415993 SPANXCQ9NY87 97 aa11.86□□□□□ -0.51
HDAC10-203ENST00000415993 TIMM17BO60830 172 aa11.86□□□□□ -0.51
HDAC10-203ENST00000415993 LELP1Q5T871 98 aa11.86□□□□□ -0.51
HDAC10-203ENST00000415993 A0A087WZ39 114 aa11.85□□□□□ -0.51
HDAC10-203ENST00000415993 A4D1N5 150 aa11.85□□□□□ -0.51
HDAC10-203ENST00000415993 H3BNG1 76 aa11.85□□□□□ -0.51
HDAC10-203ENST00000415993 ETDBQ3ZM63 59 aa11.85□□□□□ -0.51
HDAC10-203ENST00000415993 MDFIQ99750 246 aa11.85□□□□□ -0.51
HDAC10-203ENST00000415993 MGAM2Q2M2H8 2515 aa11.85□□□□□ -0.51
HDAC10-203ENST00000415993 K7EIL1 84 aa11.85□□□□□ -0.51
HDAC10-203ENST00000415993 MTURNQ8N3F0 131 aa11.85□□□□□ -0.51
HDAC10-203ENST00000415993 EIF4EBP3O60516 100 aaPredicted RBP11.84□□□□□ -0.51
HDAC10-203ENST00000415993 APOMO95445 188 aa11.84□□□□□ -0.51
HDAC10-203ENST00000415993 MIAQ16674 131 aa11.84□□□□□ -0.51
HDAC10-203ENST00000415993 CLPSL2Q6UWE3 100 aa11.84□□□□□ -0.51
HDAC10-203ENST00000415993 LYPD5Q6UWN5 251 aa11.84□□□□□ -0.51
HDAC10-203ENST00000415993 LINC00269Q8N2A0 174 aa11.84□□□□□ -0.51
HDAC10-203ENST00000415993 KPRPQ5T749 579 aaPredicted RBP11.83□□□□□ -0.52
HDAC10-203ENST00000415993 PGPEP1Q9NXJ5 209 aa11.83□□□□□ -0.52
HDAC10-203ENST00000415993 PRSS2P07478 247 aa11.82□□□□□ -0.52
HDAC10-203ENST00000415993 SS18Q15532 418 aa11.82□□□□□ -0.52
HDAC10-203ENST00000415993 C5orf38Q86SI9 138 aa11.82□□□□□ -0.52
HDAC10-203ENST00000415993 GAGE12HA6NDE8 117 aa11.82□□□□□ -0.52
HDAC10-203ENST00000415993 J3QR89 54 aa11.82□□□□□ -0.52
HDAC10-203ENST00000415993 XCL1P47992 114 aa11.82□□□□□ -0.52
HDAC10-203ENST00000415993 NANOS2P60321 138 aaKnown RBP11.82□□□□□ -0.52
HDAC10-203ENST00000415993 TM2D3Q9BRN9 247 aa11.82□□□□□ -0.52
HDAC10-203ENST00000415993 COX7B2Q8TF08 81 aa11.81□□□□□ -0.52
HDAC10-203ENST00000415993 SIGMAR1Q99720 223 aa11.81□□□□□ -0.52
HDAC10-203ENST00000415993 ANGP03950 147 aaKnown RBP11.81□□□□□ -0.52
HDAC10-203ENST00000415993 C11orf45Q8TAV5 145 aa11.81□□□□□ -0.52
HDAC10-203ENST00000415993 HUWE1Q7Z6Z7 4374 aaKnown RBP11.8□□□□□ -0.52
HDAC10-203ENST00000415993 TSPAN13O95857 204 aa11.8□□□□□ -0.52
HDAC10-203ENST00000415993 REG3AQ06141 175 aa11.8□□□□□ -0.52
HDAC10-203ENST00000415993 DAND5Q8N907 189 aa11.8□□□□□ -0.52
HDAC10-203ENST00000415993 SPATA25Q9BR10 227 aa11.8□□□□□ -0.52
HDAC10-203ENST00000415993 HERV-K104P63124 156 aa11.79□□□□□ -0.52
HDAC10-203ENST00000415993 A0A0B4J2C4 111 aa11.79□□□□□ -0.52
HDAC10-203ENST00000415993 CIRBPQ14011 172 aaKnown RBP11.79□□□□□ -0.52
HDAC10-203ENST00000415993 PRO1854Q9UHT4 67 aa11.79□□□□□ -0.52
HDAC10-203ENST00000415993 SCGB1A1P11684 91 aa11.78□□□□□ -0.52
HDAC10-203ENST00000415993 SMCPP49901 116 aaPredicted RBP11.78□□□□□ -0.52
HDAC10-203ENST00000415993 IFITM1P13164 125 aa11.77□□□□□ -0.52
HDAC10-203ENST00000415993 NPC2P61916 151 aa11.77□□□□□ -0.52
HDAC10-203ENST00000415993 TOMM7Q9P0U1 55 aa11.77□□□□□ -0.52
HDAC10-203ENST00000415993 DEFB131BA0A096LNP1 70 aa11.77□□□□□ -0.53
HDAC10-203ENST00000415993 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.77□□□□□ -0.53
HDAC10-203ENST00000415993 DEFB121Q5J5C9 76 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms