RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 URB1-AS1Q96HZ7 61 aa3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 MYLKQ15746 1914 aa3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 SBF1O95248 1867 aa3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 TICRRQ7Z2Z1 1910 aa3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 CREBBPQ92793 2442 aa3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 IGLV1-50A0A075B6I6 118 aa3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 IGKV1-6A0A0C4DH72 117 aa3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 TLX1NBP0CAT3 122 aa3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 BBC3Q96PG8 261 aaPredicted RBP3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 TANC2Q9HCD6 1990 aa3.7□□□□□ -1.82
R3HDM1-204ENST00000410054 IGLV3-9A0A075B6K5 115 aa3.7□□□□□ -1.82
R3HDM1-204ENST00000410054 WISP3O95389 354 aaPredicted RBP3.7□□□□□ -1.82
R3HDM1-204ENST00000410054 KAAG1Q9UBP8 84 aa3.7□□□□□ -1.82
R3HDM1-204ENST00000410054 IGKV3-20P01619 116 aa3.7□□□□□ -1.82
R3HDM1-204ENST00000410054 RPL39P62891 51 aaKnown RBP3.7□□□□□ -1.82
R3HDM1-204ENST00000410054 TSHBP01222 138 aa3.7□□□□□ -1.82
R3HDM1-204ENST00000410054 IGHV3-23P01764 117 aa3.7□□□□□ -1.82
R3HDM1-204ENST00000410054 AGRNO00468 2067 aa3.7□□□□□ -1.82
R3HDM1-204ENST00000410054 DSCAMO60469 2012 aa3.7□□□□□ -1.82
R3HDM1-204ENST00000410054 NDUFA1O15239 70 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 HMGA1P17096 107 aaKnown RBP3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 MOBPQ13875 183 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 SMIM11BQ8TCY0 68 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 RPL39LQ96EH5 51 aaKnown RBP3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 FAM218AQ96MZ4 157 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 FAM215AQ9Y5M1 114 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 FRMPD3Q5JV73 1810 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 NUP210LQ5VU65 1888 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 IGHV3-38A0A0C4DH36 116 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 LMO4P61968 165 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 IGLV3-21P80748 117 aaPredicted RBP3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 C10orf25Q5T742 122 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 TRIOO75962 3097 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 PATE4P0C8F1 98 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 ARTNQ5T4W7 220 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 C11orf1Q9H5F2 150 aa3.69□□□□□ -1.82
R3HDM1-204ENST00000410054 WNK1Q9H4A3 2382 aa3.68□□□□□ -1.82
R3HDM1-204ENST00000410054 TRANK1O15050 2925 aa3.68□□□□□ -1.82
R3HDM1-204ENST00000410054 IGLV10-54A0A075B6I4 117 aa3.68□□□□□ -1.82
R3HDM1-204ENST00000410054 FSTL3O95633 263 aa3.68□□□□□ -1.82
R3HDM1-204ENST00000410054 PRRC2AP48634 2157 aaKnown RBP3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 ZNF833PQ6ZTB9 187 aa3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 LINC01600Q96MT4 127 aa3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 IGLV5-52A0A0A0MRZ9 124 aa3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 PLA2G1BP04054 148 aaKnown RBP3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 Q5VV11 94 aa3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 C9orf106Q8NAJ2 232 aa3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 C16orf95Q9H693 158 aa3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 SPTBN2O15020 2390 aa3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 HELZP42694 1942 aaKnown RBP3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 PLXNB2O15031 1838 aa3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 C2orf16Q68DN1 1984 aa3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 SPINK2P20155 84 aa3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 RNF185Q96GF1 192 aa3.67□□□□□ -1.82
R3HDM1-204ENST00000410054 PATJQ8NI35 1801 aa3.66□□□□□ -1.82
R3HDM1-204ENST00000410054 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.66□□□□□ -1.82
R3HDM1-204ENST00000410054 CHD9Q3L8U1 2897 aa3.66□□□□□ -1.82
R3HDM1-204ENST00000410054 TRGV1A0A0A0MS02 117 aa3.66□□□□□ -1.82
R3HDM1-204ENST00000410054 MUC7Q8TAX7 377 aa3.66□□□□□ -1.82
R3HDM1-204ENST00000410054 LAMA1P25391 3075 aa3.66□□□□□ -1.82
R3HDM1-204ENST00000410054 A6NN06 94 aa3.66□□□□□ -1.82
R3HDM1-204ENST00000410054 CYSRT1A8MQ03 144 aa3.66□□□□□ -1.82
R3HDM1-204ENST00000410054 CEP250Q9BV73 2442 aa3.66□□□□□ -1.82
R3HDM1-204ENST00000410054 TRIOBPQ9H2D6 2365 aa3.65□□□□□ -1.82
R3HDM1-204ENST00000410054 CELSR3Q9NYQ7 3312 aa3.65□□□□□ -1.82
R3HDM1-204ENST00000410054 COL6A6A6NMZ7 2263 aa3.65□□□□□ -1.82
R3HDM1-204ENST00000410054 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
R3HDM1-204ENST00000410054 RPL37AP61513 92 aaKnown RBP3.65□□□□□ -1.83
R3HDM1-204ENST00000410054 DAZAP2Q15038 168 aaPredicted RBP3.65□□□□□ -1.83
R3HDM1-204ENST00000410054 NYNRINQ9P2P1 1898 aaKnown RBP3.65□□□□□ -1.83
R3HDM1-204ENST00000410054 DEFB116Q30KQ4 102 aa3.65□□□□□ -1.83
R3HDM1-204ENST00000410054 LINC00167Q96N53 147 aa3.65□□□□□ -1.83
R3HDM1-204ENST00000410054 CTSGP08311 255 aa3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 S4R3C0 116 aa3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 MALRD1Q5VYJ5 2156 aa3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 NLRC5Q86WI3 1866 aa3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 PCDH15Q96QU1 1955 aa3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 IGKV2-29A2NJV5 120 aaPredicted RBP3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 SLURP1P55000 103 aa3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 LINC00575Q6W349 94 aa3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 PTPRDP23468 1912 aa3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 IGHV3OR16-8A0A075B7F1 116 aa3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 CYSTM1Q9H1C7 97 aa3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 C11orf21Q9P2W6 132 aa3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 APC2O95996 2303 aa3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 FLG2Q5D862 2391 aaPredicted RBP3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 Q6ZTC4 211 aa3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 TNRC6BQ9UPQ9 1833 aaKnown RBP3.64□□□□□ -1.83
R3HDM1-204ENST00000410054 NOTCH4Q99466 2003 aa3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 IGLV1-40P01703 118 aa3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 LPAL2Q16609 132 aa3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 LINC00242Q5T6M2 205 aa3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 IGFL4Q6B9Z1 124 aa3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 Q8N9P0 234 aaPredicted RBP3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 TMEM167AQ8TBQ9 72 aa3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 TRBV6-4A0A1B0GX49 114 aa3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 ROMO1P60602 79 aa3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 CDC42SE2Q9NRR3 84 aa3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 SVEP1Q4LDE5 3571 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms