RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ATP6V0E2Q8NHE4 81 aa12.45□□□□□ -0.42
HLA-DQB1-204ENST00000399084 VPS25Q9BRG1 176 aa12.45□□□□□ -0.42
HLA-DQB1-204ENST00000399084 TRBV30A0A0K0K1B3 111 aa12.45□□□□□ -0.42
HLA-DQB1-204ENST00000399084 A0A1B0GUV1 79 aa12.45□□□□□ -0.42
HLA-DQB1-204ENST00000399084 SCGB1C2P0DMR2 95 aa12.45□□□□□ -0.42
HLA-DQB1-204ENST00000399084 ADAMTSL4-AS1Q5T5F5 129 aa12.45□□□□□ -0.42
HLA-DQB1-204ENST00000399084 SFTA2Q6UW10 78 aa12.45□□□□□ -0.42
HLA-DQB1-204ENST00000399084 M0QXV9 152 aa12.44□□□□□ -0.42
HLA-DQB1-204ENST00000399084 MIFP14174 115 aa12.44□□□□□ -0.42
HLA-DQB1-204ENST00000399084 WFDC2Q14508 124 aa12.44□□□□□ -0.42
HLA-DQB1-204ENST00000399084 RNF151Q2KHN1 245 aa12.44□□□□□ -0.42
HLA-DQB1-204ENST00000399084 CHCHD5Q9BSY4 110 aa12.44□□□□□ -0.42
HLA-DQB1-204ENST00000399084 PSMB2P49721 201 aa12.43□□□□□ -0.42
HLA-DQB1-204ENST00000399084 Q9H8V8 135 aa12.43□□□□□ -0.42
HLA-DQB1-204ENST00000399084 KRTAP21-3Q3LHN1 58 aa12.42□□□□□ -0.42
HLA-DQB1-204ENST00000399084 ZNF625Q96I27 306 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-204ENST00000399084 GYPEP15421 78 aa12.42□□□□□ -0.42
HLA-DQB1-204ENST00000399084 GAGE6Q13070 117 aa12.42□□□□□ -0.42
HLA-DQB1-204ENST00000399084 A8MZ25 164 aa12.41□□□□□ -0.42
HLA-DQB1-204ENST00000399084 COX6CP09669 75 aa12.41□□□□□ -0.42
HLA-DQB1-204ENST00000399084 FAM222AQ5U5X8 452 aa12.41□□□□□ -0.42
HLA-DQB1-204ENST00000399084 PRIMA1Q86XR5 153 aa12.4□□□□□ -0.42
HLA-DQB1-204ENST00000399084 LINC01561Q8N1V8 128 aa12.4□□□□□ -0.42
HLA-DQB1-204ENST00000399084 HIVEP1P15822 2718 aa12.4□□□□□ -0.42
HLA-DQB1-204ENST00000399084 TRAV26-1A0A087WT03 109 aa12.4□□□□□ -0.43
HLA-DQB1-204ENST00000399084 TEX48A0A1B0GUV7 120 aa12.4□□□□□ -0.43
HLA-DQB1-204ENST00000399084 TCL1BO95988 128 aa12.4□□□□□ -0.43
HLA-DQB1-204ENST00000399084 SH2D6Q7Z4S9 175 aa12.4□□□□□ -0.43
HLA-DQB1-204ENST00000399084 JMJD1CQ15652 2540 aa12.39□□□□□ -0.43
HLA-DQB1-204ENST00000399084 PAX4O43316 350 aa12.39□□□□□ -0.43
HLA-DQB1-204ENST00000399084 EIF4EBP3O60516 100 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQB1-204ENST00000399084 A0A087WZ39 114 aa12.38□□□□□ -0.43
HLA-DQB1-204ENST00000399084 IGHV3OR16-9A0A0B4J2B5 98 aa12.38□□□□□ -0.43
HLA-DQB1-204ENST00000399084 Q1RN00 199 aa12.38□□□□□ -0.43
HLA-DQB1-204ENST00000399084 ETDBQ3ZM63 59 aa12.38□□□□□ -0.43
HLA-DQB1-204ENST00000399084 LINC01600Q96MT4 127 aa12.38□□□□□ -0.43
HLA-DQB1-204ENST00000399084 NOTCH3Q9UM47 2321 aa12.37□□□□□ -0.43
HLA-DQB1-204ENST00000399084 CUBNO60494 3623 aa12.37□□□□□ -0.43
HLA-DQB1-204ENST00000399084 ATXN8Q156A1 80 aa12.37□□□□□ -0.43
HLA-DQB1-204ENST00000399084 LINC00308Q8TCZ7 52 aa12.37□□□□□ -0.43
HLA-DQB1-204ENST00000399084 IGLV4-60A0A075B6I1 120 aa12.37□□□□□ -0.43
HLA-DQB1-204ENST00000399084 COX7B2Q8TF08 81 aa12.37□□□□□ -0.43
HLA-DQB1-204ENST00000399084 NSD1Q96L73 2696 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQB1-204ENST00000399084 ATP5G1P05496 136 aa12.36□□□□□ -0.43
HLA-DQB1-204ENST00000399084 SPART-AS1P0CW21 52 aa12.36□□□□□ -0.43
HLA-DQB1-204ENST00000399084 DAD1P61803 113 aa12.36□□□□□ -0.43
HLA-DQB1-204ENST00000399084 DEFB135Q30KP9 77 aa12.36□□□□□ -0.43
HLA-DQB1-204ENST00000399084 IGHV4-28A0A0C4DH34 117 aa12.35□□□□□ -0.43
HLA-DQB1-204ENST00000399084 SS18Q15532 418 aa12.35□□□□□ -0.43
HLA-DQB1-204ENST00000399084 MEIG1Q5JSS6 88 aa12.35□□□□□ -0.43
HLA-DQB1-204ENST00000399084 SPATA3Q8NHX4 192 aa12.35□□□□□ -0.43
HLA-DQB1-204ENST00000399084 LINC00959A0A1B0GUT2 108 aa12.34□□□□□ -0.43
HLA-DQB1-204ENST00000399084 FN1P02751 2386 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB1-204ENST00000399084 TEN1Q86WV5 123 aa12.34□□□□□ -0.43
HLA-DQB1-204ENST00000399084 Q8NAQ8 132 aa12.34□□□□□ -0.43
HLA-DQB1-204ENST00000399084 ICOSQ9Y6W8 199 aa12.34□□□□□ -0.43
HLA-DQB1-204ENST00000399084 SMCPP49901 116 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB1-204ENST00000399084 TMEM262E9PQX1 116 aa12.31□□□□□ -0.44
HLA-DQB1-204ENST00000399084 H7C2G1 150 aa12.31□□□□□ -0.44
HLA-DQB1-204ENST00000399084 MRPL23Q16540 153 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB1-204ENST00000399084 NIPBLQ6KC79 2804 aaeCLIP12.31□□□□□ -0.44
HLA-DQB1-204ENST00000399084 IBA57-AS1B1ANH7 110 aa12.31□□□□□ -0.44
HLA-DQB1-204ENST00000399084 TRIAP1O43715 76 aa12.31□□□□□ -0.44
HLA-DQB1-204ENST00000399084 IGHV4-30-4P0DP06 118 aa12.31□□□□□ -0.44
HLA-DQB1-204ENST00000399084 FOXI1Q12951 378 aa12.31□□□□□ -0.44
HLA-DQB1-204ENST00000399084 PPDPFLQ8WWR9 84 aa12.31□□□□□ -0.44
HLA-DQB1-204ENST00000399084 SLC25A20O43772 301 aa12.29□□□□□ -0.44
HLA-DQB1-204ENST00000399084 RPL13AP40429 203 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB1-204ENST00000399084 LINC01620Q4KN68 170 aa12.28□□□□□ -0.44
HLA-DQB1-204ENST00000399084 PCP4P48539 62 aa12.27□□□□□ -0.45
HLA-DQB1-204ENST00000399084 DAND5Q8N907 189 aa12.27□□□□□ -0.45
HLA-DQB1-204ENST00000399084 TRAV13-2A0A0B4J235 113 aa12.26□□□□□ -0.45
HLA-DQB1-204ENST00000399084 IGKV3OR2-268A0A0C4DH90 116 aa12.26□□□□□ -0.45
HLA-DQB1-204ENST00000399084 TRBV10-2A0A0K0K1G8 114 aa12.26□□□□□ -0.45
HLA-DQB1-204ENST00000399084 C9JAW5 83 aa12.26□□□□□ -0.45
HLA-DQB1-204ENST00000399084 NPC2P61916 151 aa12.26□□□□□ -0.45
HLA-DQB1-204ENST00000399084 Q8IZM0 81 aa12.26□□□□□ -0.45
HLA-DQB1-204ENST00000399084 MTURNQ8N3F0 131 aa12.26□□□□□ -0.45
HLA-DQB1-204ENST00000399084 ANKRD29Q8N6D5 301 aa12.26□□□□□ -0.45
HLA-DQB1-204ENST00000399084 SHISA2Q6UWI4 295 aa12.25□□□□□ -0.45
HLA-DQB1-204ENST00000399084 H3BNG1 76 aa12.25□□□□□ -0.45
HLA-DQB1-204ENST00000399084 CD164L2Q6UWJ8 174 aa12.25□□□□□ -0.45
HLA-DQB1-204ENST00000399084 SPATA25Q9BR10 227 aa12.25□□□□□ -0.45
HLA-DQB1-204ENST00000399084 TOMM7Q9P0U1 55 aa12.25□□□□□ -0.45
HLA-DQB1-204ENST00000399084 H3BT86 120 aa12.24□□□□□ -0.45
HLA-DQB1-204ENST00000399084 C6orf226Q5I0X4 101 aa12.24□□□□□ -0.45
HLA-DQB1-204ENST00000399084 LELP1Q5T871 98 aa12.24□□□□□ -0.45
HLA-DQB1-204ENST00000399084 SOSTDC1Q6X4U4 206 aa12.24□□□□□ -0.45
HLA-DQB1-204ENST00000399084 GAGE12HA6NDE8 117 aa12.23□□□□□ -0.45
HLA-DQB1-204ENST00000399084 LST1O00453 97 aa12.23□□□□□ -0.45
HLA-DQB1-204ENST00000399084 CXCL5P42830 114 aa12.23□□□□□ -0.45
HLA-DQB1-204ENST00000399084 EGFEM1PQ0D2K5 195 aa12.23□□□□□ -0.45
HLA-DQB1-204ENST00000399084 C5orf38Q86SI9 138 aa12.23□□□□□ -0.45
HLA-DQB1-204ENST00000399084 DEFB4AO15263 64 aa12.22□□□□□ -0.45
HLA-DQB1-204ENST00000399084 MIR7-3HGQ8N6C7 128 aa12.22□□□□□ -0.45
HLA-DQB1-204ENST00000399084 COX7A2LO14548 114 aa12.21□□□□□ -0.45
HLA-DQB1-204ENST00000399084 LINC00158P58513 81 aa12.21□□□□□ -0.45
HLA-DQB1-204ENST00000399084 SIGMAR1Q99720 223 aa12.21□□□□□ -0.45
HLA-DQB1-204ENST00000399084 CELA1Q9UNI1 258 aa12.21□□□□□ -0.45
HLA-DQB1-204ENST00000399084 A0A0U1RRA0 63 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms