RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 SPANXCQ9NY87 97 aa10.46□□□□□ -0.74
CBX3-202ENST00000396386 TIMM17BO60830 172 aa10.45□□□□□ -0.74
CBX3-202ENST00000396386 TSPAN13O95857 204 aa10.45□□□□□ -0.74
CBX3-202ENST00000396386 MUSTN1Q8IVN3 82 aa10.45□□□□□ -0.74
CBX3-202ENST00000396386 A4D1N5 150 aa10.44□□□□□ -0.74
CBX3-202ENST00000396386 CFC1BP0CG36 223 aa10.44□□□□□ -0.74
CBX3-202ENST00000396386 CFC1P0CG37 223 aa10.44□□□□□ -0.74
CBX3-202ENST00000396386 MDFIQ99750 246 aa10.44□□□□□ -0.74
CBX3-202ENST00000396386 IGLV4-60A0A075B6I1 120 aa10.44□□□□□ -0.74
CBX3-202ENST00000396386 F5H768 121 aa10.44□□□□□ -0.74
CBX3-202ENST00000396386 MIAQ16674 131 aa10.44□□□□□ -0.74
CBX3-202ENST00000396386 CELA1Q9UNI1 258 aa10.44□□□□□ -0.74
CBX3-202ENST00000396386 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.43□□□□□ -0.74
CBX3-202ENST00000396386 C3orf56Q8N813 242 aa10.43□□□□□ -0.74
CBX3-202ENST00000396386 A0A0B4J2C4 111 aa10.42□□□□□ -0.74
CBX3-202ENST00000396386 ATP5G1P05496 136 aa10.42□□□□□ -0.74
CBX3-202ENST00000396386 SPART-AS1P0CW21 52 aa10.42□□□□□ -0.74
CBX3-202ENST00000396386 OXLD1Q5BKU9 147 aa10.42□□□□□ -0.74
CBX3-202ENST00000396386 SHISA2Q6UWI4 295 aa10.42□□□□□ -0.74
CBX3-202ENST00000396386 PRO1854Q9UHT4 67 aa10.42□□□□□ -0.74
CBX3-202ENST00000396386 LYRM7Q5U5X0 104 aa10.42□□□□□ -0.74
CBX3-202ENST00000396386 IGKV3OR2-268A0A0C4DH90 116 aa10.41□□□□□ -0.74
CBX3-202ENST00000396386 ADAMTSL4-AS1Q5T5F5 129 aa10.41□□□□□ -0.74
CBX3-202ENST00000396386 Q9H8V8 135 aa10.41□□□□□ -0.74
CBX3-202ENST00000396386 KRTAP10-11P60412 298 aa10.4□□□□□ -0.74
CBX3-202ENST00000396386 A0A096LPF7 62 aa10.4□□□□□ -0.75
CBX3-202ENST00000396386 TEX48A0A1B0GUV7 120 aa10.4□□□□□ -0.75
CBX3-202ENST00000396386 PRSS2P07478 247 aa10.4□□□□□ -0.75
CBX3-202ENST00000396386 CIRBPQ14011 172 aaKnown RBP10.4□□□□□ -0.75
CBX3-202ENST00000396386 IFITM1P13164 125 aa10.39□□□□□ -0.75
CBX3-202ENST00000396386 EGFEM1PQ0D2K5 195 aa10.39□□□□□ -0.75
CBX3-202ENST00000396386 TRAV26-1A0A087WT03 109 aa10.38□□□□□ -0.75
CBX3-202ENST00000396386 LOC107984156A0A0G2JMH3 177 aa10.38□□□□□ -0.75
CBX3-202ENST00000396386 A0A1B0GUV1 79 aa10.38□□□□□ -0.75
CBX3-202ENST00000396386 EIF4EBP3O60516 100 aaPredicted RBP10.38□□□□□ -0.75
CBX3-202ENST00000396386 RBX1P62877 108 aa10.38□□□□□ -0.75
CBX3-202ENST00000396386 ARL17AQ8IVW1 177 aa10.38□□□□□ -0.75
CBX3-202ENST00000396386 ZNF625Q96I27 306 aaPredicted RBP10.38□□□□□ -0.75
CBX3-202ENST00000396386 ANK2Q01484 3957 aa10.38□□□□□ -0.75
CBX3-202ENST00000396386 TMEM262E9PQX1 116 aa10.38□□□□□ -0.75
CBX3-202ENST00000396386 HERV-K104P63124 156 aa10.38□□□□□ -0.75
CBX3-202ENST00000396386 H3BMG7 143 aa10.37□□□□□ -0.75
CBX3-202ENST00000396386 IGHV3-33P01772 117 aa10.37□□□□□ -0.75
CBX3-202ENST00000396386 OCIAD2Q56VL3 154 aa10.37□□□□□ -0.75
CBX3-202ENST00000396386 LINC00959A0A1B0GUT2 108 aa10.36□□□□□ -0.75
CBX3-202ENST00000396386 HTN3P15516 51 aa10.36□□□□□ -0.75
CBX3-202ENST00000396386 NPC2P61916 151 aa10.36□□□□□ -0.75
CBX3-202ENST00000396386 SFTA2Q6UW10 78 aa10.36□□□□□ -0.75
CBX3-202ENST00000396386 COX7B2Q8TF08 81 aa10.36□□□□□ -0.75
CBX3-202ENST00000396386 IGHV3OR16-9A0A0B4J2B5 98 aa10.36□□□□□ -0.75
CBX3-202ENST00000396386 ERG28Q9UKR5 140 aa10.36□□□□□ -0.75
CBX3-202ENST00000396386 F8W1H4 67 aa10.35□□□□□ -0.75
CBX3-202ENST00000396386 MRPL23Q16540 153 aaKnown RBP10.35□□□□□ -0.75
CBX3-202ENST00000396386 MEIG1Q5JSS6 88 aa10.35□□□□□ -0.75
CBX3-202ENST00000396386 ICOSQ9Y6W8 199 aa10.35□□□□□ -0.75
CBX3-202ENST00000396386 A0A087WZ39 114 aa10.34□□□□□ -0.75
CBX3-202ENST00000396386 SS18Q15532 418 aa10.34□□□□□ -0.75
CBX3-202ENST00000396386 SH2D6Q7Z4S9 175 aa10.34□□□□□ -0.75
CBX3-202ENST00000396386 DAND5Q8N907 189 aa10.34□□□□□ -0.75
CBX3-202ENST00000396386 COPS9Q8WXC6 57 aa10.34□□□□□ -0.75
CBX3-202ENST00000396386 PSMB2P49721 201 aa10.34□□□□□ -0.75
CBX3-202ENST00000396386 Q1RN00 199 aa10.34□□□□□ -0.75
CBX3-202ENST00000396386 RETNQ9HD89 108 aa10.34□□□□□ -0.75
CBX3-202ENST00000396386 H7C2G1 150 aa10.33□□□□□ -0.76
CBX3-202ENST00000396386 K7ERU9 68 aa10.33□□□□□ -0.76
CBX3-202ENST00000396386 TOMM7Q9P0U1 55 aa10.33□□□□□ -0.76
CBX3-202ENST00000396386 NBEAL1Q6ZS30 2694 aa10.33□□□□□ -0.76
CBX3-202ENST00000396386 TRBV20-1A0A075B6N2 111 aa10.32□□□□□ -0.76
CBX3-202ENST00000396386 LINC00308Q8TCZ7 52 aa10.32□□□□□ -0.76
CBX3-202ENST00000396386 CLPSL2Q6UWE3 100 aa10.32□□□□□ -0.76
CBX3-202ENST00000396386 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
CBX3-202ENST00000396386 PRO0461Q9UI25 63 aa10.32□□□□□ -0.76
CBX3-202ENST00000396386 A0A0U1RRA0 63 aa10.31□□□□□ -0.76
CBX3-202ENST00000396386 SCGB1C2P0DMR2 95 aa10.31□□□□□ -0.76
CBX3-202ENST00000396386 TCL1BO95988 128 aa10.3□□□□□ -0.76
CBX3-202ENST00000396386 XCL1P47992 114 aa10.3□□□□□ -0.76
CBX3-202ENST00000396386 LELP1Q5T871 98 aa10.3□□□□□ -0.76
CBX3-202ENST00000396386 C11orf68Q9H3H3 251 aaKnown RBP10.3□□□□□ -0.76
CBX3-202ENST00000396386 WFDC2Q14508 124 aa10.3□□□□□ -0.76
CBX3-202ENST00000396386 MTURNQ8N3F0 131 aa10.3□□□□□ -0.76
CBX3-202ENST00000396386 PPDPFQ9H3Y8 114 aa10.3□□□□□ -0.76
CBX3-202ENST00000396386 NBEAL2Q6ZNJ1 2754 aa10.29□□□□□ -0.76
CBX3-202ENST00000396386 LINC01561Q8N1V8 128 aa10.29□□□□□ -0.76
CBX3-202ENST00000396386 LINC00269Q8N2A0 174 aa10.29□□□□□ -0.76
CBX3-202ENST00000396386 G3V4G9 280 aa10.28□□□□□ -0.76
CBX3-202ENST00000396386 ANGP03950 147 aaKnown RBP10.28□□□□□ -0.76
CBX3-202ENST00000396386 RPL13AP40429 203 aaKnown RBP10.28□□□□□ -0.76
CBX3-202ENST00000396386 TRBV30A0A0K0K1B3 111 aa10.27□□□□□ -0.76
CBX3-202ENST00000396386 RNF151Q2KHN1 245 aa10.27□□□□□ -0.76
CBX3-202ENST00000396386 SOSTDC1Q6X4U4 206 aa10.27□□□□□ -0.76
CBX3-202ENST00000396386 TRIAP1O43715 76 aa10.26□□□□□ -0.77
CBX3-202ENST00000396386 REG3AQ06141 175 aa10.26□□□□□ -0.77
CBX3-202ENST00000396386 Q8N3U1 123 aa10.26□□□□□ -0.77
CBX3-202ENST00000396386 TRRAPQ9Y4A5 3859 aa10.26□□□□□ -0.77
CBX3-202ENST00000396386 H3BNG1 76 aa10.25□□□□□ -0.77
CBX3-202ENST00000396386 CD164L2Q6UWJ8 174 aa10.25□□□□□ -0.77
CBX3-202ENST00000396386 Q8IZM0 81 aa10.25□□□□□ -0.77
CBX3-202ENST00000396386 CHCHD10Q8WYQ3 142 aaPredicted RBP10.25□□□□□ -0.77
CBX3-202ENST00000396386 IBA57-AS1B1ANH7 110 aa10.24□□□□□ -0.77
CBX3-202ENST00000396386 COX7A2LO14548 114 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms