RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 EBI3Q14213 229 aa6.29□□□□□ -1.4
NDE1-202ENST00000396355 SBSPONQ8IVN8 264 aa6.29□□□□□ -1.4
NDE1-202ENST00000396355 MGAM2Q2M2H8 2515 aa6.29□□□□□ -1.4
NDE1-202ENST00000396355 OTOGQ6ZRI0 2925 aa6.29□□□□□ -1.4
NDE1-202ENST00000396355 C15orf32Q32M92 178 aa6.29□□□□□ -1.4
NDE1-202ENST00000396355 FUSP35637 526 aaKnown RBP eCLIP6.28□□□□□ -1.4
NDE1-202ENST00000396355 TMEM30BQ3MIR4 351 aa6.28□□□□□ -1.4
NDE1-202ENST00000396355 HOXB4P17483 251 aaPredicted RBP6.28□□□□□ -1.4
NDE1-202ENST00000396355 MIAQ16674 131 aa6.28□□□□□ -1.4
NDE1-202ENST00000396355 ORMDL1Q9P0S3 153 aa6.27□□□□□ -1.41
NDE1-202ENST00000396355 IGHV1-3A0A0C4DH29 117 aa6.27□□□□□ -1.41
NDE1-202ENST00000396355 IGF1P05019 195 aa6.27□□□□□ -1.41
NDE1-202ENST00000396355 BLCAPP62952 87 aa6.27□□□□□ -1.41
NDE1-202ENST00000396355 SUMO4Q6EEV6 95 aa6.27□□□□□ -1.41
NDE1-202ENST00000396355 OXTP01178 125 aa6.26□□□□□ -1.41
NDE1-202ENST00000396355 KRTAP21-3Q3LHN1 58 aa6.26□□□□□ -1.41
NDE1-202ENST00000396355 Q5XG85 94 aa6.26□□□□□ -1.41
NDE1-202ENST00000396355 VSIG2Q96IQ7 327 aa6.26□□□□□ -1.41
NDE1-202ENST00000396355 CSMD2Q7Z408 3487 aa6.26□□□□□ -1.41
NDE1-202ENST00000396355 C5orf38Q86SI9 138 aa6.26□□□□□ -1.41
NDE1-202ENST00000396355 SND1-IT1Q9HBX3 110 aa6.26□□□□□ -1.41
NDE1-202ENST00000396355 PDZD2O15018 2839 aa6.25□□□□□ -1.41
NDE1-202ENST00000396355 IGHV1-69DA0A0B4J2H0 117 aa6.25□□□□□ -1.41
NDE1-202ENST00000396355 DYNLRB2Q8TF09 96 aa6.25□□□□□ -1.41
NDE1-202ENST00000396355 C11orf21Q9P2W6 132 aa6.25□□□□□ -1.41
NDE1-202ENST00000396355 IGHV4-28A0A0C4DH34 117 aa6.25□□□□□ -1.41
NDE1-202ENST00000396355 IGHV3-53P01767 116 aa6.25□□□□□ -1.41
NDE1-202ENST00000396355 BPESC1Q9GZL8 116 aa6.25□□□□□ -1.41
NDE1-202ENST00000396355 NF1P21359 2839 aa6.25□□□□□ -1.41
NDE1-202ENST00000396355 TRAV13-2A0A0B4J235 113 aa6.25□□□□□ -1.41
NDE1-202ENST00000396355 SPATA3Q8NHX4 192 aa6.25□□□□□ -1.41
NDE1-202ENST00000396355 OVOL2Q9BRP0 275 aa6.25□□□□□ -1.41
NDE1-202ENST00000396355 NOTCH1P46531 2555 aa6.24□□□□□ -1.41
NDE1-202ENST00000396355 TEX22C9J3V5 150 aa6.24□□□□□ -1.41
NDE1-202ENST00000396355 SAA4P35542 130 aa6.24□□□□□ -1.41
NDE1-202ENST00000396355 C4orf48Q5BLP8 95 aa6.24□□□□□ -1.41
NDE1-202ENST00000396355 MRPL53Q96EL3 112 aaKnown RBP6.24□□□□□ -1.41
NDE1-202ENST00000396355 CHKB-CPT1BH3BT56 60 aa6.24□□□□□ -1.41
NDE1-202ENST00000396355 IGLV1-47P01700 117 aa6.24□□□□□ -1.41
NDE1-202ENST00000396355 C6orf226Q5I0X4 101 aa6.24□□□□□ -1.41
NDE1-202ENST00000396355 KAAG1Q9UBP8 84 aa6.24□□□□□ -1.41
NDE1-202ENST00000396355 CCKP06307 115 aa6.24□□□□□ -1.41
NDE1-202ENST00000396355 BRD3OSQ6XYD6 125 aa6.24□□□□□ -1.41
NDE1-202ENST00000396355 STHQ8IWL8 128 aa6.24□□□□□ -1.41
NDE1-202ENST00000396355 COX7B2Q8TF08 81 aa6.24□□□□□ -1.41
NDE1-202ENST00000396355 IGHV4-4A0A075B6R2 117 aa6.23□□□□□ -1.41
NDE1-202ENST00000396355 IGHV1-58A0A0C4DH39 117 aa6.23□□□□□ -1.41
NDE1-202ENST00000396355 OVOL3O00110 214 aa6.23□□□□□ -1.41
NDE1-202ENST00000396355 CRYGDP07320 174 aa6.23□□□□□ -1.41
NDE1-202ENST00000396355 MIFP14174 115 aa6.23□□□□□ -1.41
NDE1-202ENST00000396355 TRBV27A0A0K0K1C4 114 aa6.23□□□□□ -1.41
NDE1-202ENST00000396355 K7EIM0 57 aa6.23□□□□□ -1.41
NDE1-202ENST00000396355 RPL28P46779 137 aaKnown RBP6.23□□□□□ -1.41
NDE1-202ENST00000396355 Q6JHZ5 121 aa6.23□□□□□ -1.41
NDE1-202ENST00000396355 ZFAND3Q9H8U3 227 aa6.23□□□□□ -1.41
NDE1-202ENST00000396355 IGLV4-69A0A075B6H9 119 aa6.22□□□□□ -1.41
NDE1-202ENST00000396355 INSP01308 110 aa6.22□□□□□ -1.41
NDE1-202ENST00000396355 HIST2H2BDQ6DRA6 164 aa6.22□□□□□ -1.41
NDE1-202ENST00000396355 LINC00308Q8TCZ7 52 aa6.22□□□□□ -1.41
NDE1-202ENST00000396355 CDKN2A-AS1Q9UH64 79 aa6.22□□□□□ -1.41
NDE1-202ENST00000396355 MIR7-3HGQ8N6C7 128 aa6.22□□□□□ -1.41
NDE1-202ENST00000396355 FBXL19-AS1Q494R0 122 aa6.22□□□□□ -1.41
NDE1-202ENST00000396355 I3L2K1 104 aa6.21□□□□□ -1.41
NDE1-202ENST00000396355 SPINK13Q1W4C9 94 aa6.21□□□□□ -1.42
NDE1-202ENST00000396355 VMO1Q7Z5L0 202 aa6.21□□□□□ -1.42
NDE1-202ENST00000396355 NSD1Q96L73 2696 aaPredicted RBP6.21□□□□□ -1.42
NDE1-202ENST00000396355 IGLV2-18A0A075B6J9 118 aa6.2□□□□□ -1.42
NDE1-202ENST00000396355 A6NED7 52 aa6.2□□□□□ -1.42
NDE1-202ENST00000396355 G3V318 75 aa6.2□□□□□ -1.42
NDE1-202ENST00000396355 TMEM190Q8WZ59 177 aa6.2□□□□□ -1.42
NDE1-202ENST00000396355 Q8N2B8 174 aa6.19□□□□□ -1.42
NDE1-202ENST00000396355 A0A1W2PPR1 153 aa6.19□□□□□ -1.42
NDE1-202ENST00000396355 C20orf203Q8NBC4 194 aa6.19□□□□□ -1.42
NDE1-202ENST00000396355 FAM110DQ8TAY7 271 aaPredicted RBP6.19□□□□□ -1.42
NDE1-202ENST00000396355 TRAV7A0A075B6U4 112 aa6.19□□□□□ -1.42
NDE1-202ENST00000396355 LY6LH3BQJ8 138 aa6.19□□□□□ -1.42
NDE1-202ENST00000396355 CELA1Q9UNI1 258 aa6.18□□□□□ -1.42
NDE1-202ENST00000396355 H0YGX0 51 aa6.18□□□□□ -1.42
NDE1-202ENST00000396355 IGLV4-3A0A075B6K6 122 aa6.18□□□□□ -1.42
NDE1-202ENST00000396355 A0A087WYN8 130 aa6.18□□□□□ -1.42
NDE1-202ENST00000396355 DSCR9P59020 149 aa6.18□□□□□ -1.42
NDE1-202ENST00000396355 TRBV6-1A0A0K0K1D8 114 aa6.17□□□□□ -1.42
NDE1-202ENST00000396355 IGHV4-30-2A0A087WSY4 118 aa6.17□□□□□ -1.42
NDE1-202ENST00000396355 IGIPA6NJ69 53 aa6.17□□□□□ -1.42
NDE1-202ENST00000396355 ESRGQ1W209 222 aa6.17□□□□□ -1.42
NDE1-202ENST00000396355 Q8N3U1 123 aa6.17□□□□□ -1.42
NDE1-202ENST00000396355 MRPS36P82909 103 aaKnown RBP6.17□□□□□ -1.42
NDE1-202ENST00000396355 C11orf44Q8N8P7 122 aa6.17□□□□□ -1.42
NDE1-202ENST00000396355 DCANP1Q8TF63 244 aa6.17□□□□□ -1.42
NDE1-202ENST00000396355 UBE2D4Q9Y2X8 147 aa6.17□□□□□ -1.42
NDE1-202ENST00000396355 F8W735 103 aaPredicted RBP6.16□□□□□ -1.42
NDE1-202ENST00000396355 JMJD7-PLA2G4BH0Y9G9 81 aa6.16□□□□□ -1.42
NDE1-202ENST00000396355 TSHBP01222 138 aa6.16□□□□□ -1.42
NDE1-202ENST00000396355 CD164Q04900 197 aa6.16□□□□□ -1.42
NDE1-202ENST00000396355 IGHV7-4-1A0A0J9YVY3 117 aa6.16□□□□□ -1.42
NDE1-202ENST00000396355 TRBV10-1A0A0K0K1A3 114 aa6.16□□□□□ -1.42
NDE1-202ENST00000396355 H3BS24 57 aa6.16□□□□□ -1.42
NDE1-202ENST00000396355 Q6ZTI0 123 aa6.16□□□□□ -1.42
NDE1-202ENST00000396355 CTSGP08311 255 aa6.16□□□□□ -1.42
NDE1-202ENST00000396355 FAM218AQ96MZ4 157 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms