RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 ATRQ13535 2644 aa6.35□□□□□ -1.39
TDP1-202ENST00000393452 TENM1Q9UKZ4 2725 aa6.35□□□□□ -1.39
TDP1-202ENST00000393452 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.35□□□□□ -1.39
TDP1-202ENST00000393452 MIAQ16674 131 aa6.35□□□□□ -1.39
TDP1-202ENST00000393452 RNF183Q96D59 192 aa6.35□□□□□ -1.39
TDP1-202ENST00000393452 IGHV3-33P01772 117 aa6.34□□□□□ -1.39
TDP1-202ENST00000393452 LYRM7Q5U5X0 104 aa6.34□□□□□ -1.39
TDP1-202ENST00000393452 LYRM9A8MSI8 78 aa6.33□□□□□ -1.4
TDP1-202ENST00000393452 APOC4P55056 127 aa6.33□□□□□ -1.4
TDP1-202ENST00000393452 LOC107984156A0A0G2JMH3 177 aa6.33□□□□□ -1.4
TDP1-202ENST00000393452 WFDC2Q14508 124 aa6.33□□□□□ -1.4
TDP1-202ENST00000393452 ARL17AQ8IVW1 177 aa6.33□□□□□ -1.4
TDP1-202ENST00000393452 IGLV4-60A0A075B6I1 120 aa6.32□□□□□ -1.4
TDP1-202ENST00000393452 TRBV20-1A0A075B6N2 111 aa6.32□□□□□ -1.4
TDP1-202ENST00000393452 PRSS2P07478 247 aa6.32□□□□□ -1.4
TDP1-202ENST00000393452 IFITM1P13164 125 aa6.32□□□□□ -1.4
TDP1-202ENST00000393452 GAGE6Q13070 117 aa6.32□□□□□ -1.4
TDP1-202ENST00000393452 DEFB135Q30KP9 77 aa6.32□□□□□ -1.4
TDP1-202ENST00000393452 FAM222AQ5U5X8 452 aa6.32□□□□□ -1.4
TDP1-202ENST00000393452 ZNF625Q96I27 306 aaPredicted RBP6.32□□□□□ -1.4
TDP1-202ENST00000393452 PRO0255Q9UI72 69 aa6.32□□□□□ -1.4
TDP1-202ENST00000393452 GYPEP15421 78 aa6.32□□□□□ -1.4
TDP1-202ENST00000393452 SFTA2Q6UW10 78 aa6.32□□□□□ -1.4
TDP1-202ENST00000393452 ATP6V0E2Q8NHE4 81 aa6.32□□□□□ -1.4
TDP1-202ENST00000393452 Q9H8V8 135 aa6.32□□□□□ -1.4
TDP1-202ENST00000393452 CHCHD5Q9BSY4 110 aa6.31□□□□□ -1.4
TDP1-202ENST00000393452 ERG28Q9UKR5 140 aa6.31□□□□□ -1.4
TDP1-202ENST00000393452 TEX48A0A1B0GUV7 120 aa6.31□□□□□ -1.4
TDP1-202ENST00000393452 TCL1BO95988 128 aa6.31□□□□□ -1.4
TDP1-202ENST00000393452 PSMB2P49721 201 aa6.3□□□□□ -1.4
TDP1-202ENST00000393452 CIRBPQ14011 172 aaKnown RBP6.3□□□□□ -1.4
TDP1-202ENST00000393452 Q8NAQ8 132 aa6.3□□□□□ -1.4
TDP1-202ENST00000393452 NBEAL2Q6ZNJ1 2754 aa6.3□□□□□ -1.4
TDP1-202ENST00000393452 IGHV3OR16-9A0A0B4J2B5 98 aa6.3□□□□□ -1.4
TDP1-202ENST00000393452 IGHV4-28A0A0C4DH34 117 aa6.3□□□□□ -1.4
TDP1-202ENST00000393452 A0A1B0GUV1 79 aa6.3□□□□□ -1.4
TDP1-202ENST00000393452 MIFP14174 115 aa6.3□□□□□ -1.4
TDP1-202ENST00000393452 SMCPP49901 116 aaPredicted RBP6.3□□□□□ -1.4
TDP1-202ENST00000393452 HERV-K104P63124 156 aa6.3□□□□□ -1.4
TDP1-202ENST00000393452 ETDBQ3ZM63 59 aa6.3□□□□□ -1.4
TDP1-202ENST00000393452 MTURNQ8N3F0 131 aa6.3□□□□□ -1.4
TDP1-202ENST00000393452 TRBV30A0A0K0K1B3 111 aa6.29□□□□□ -1.4
TDP1-202ENST00000393452 PAX4O43316 350 aa6.29□□□□□ -1.4
TDP1-202ENST00000393452 SH2D6Q7Z4S9 175 aa6.29□□□□□ -1.4
TDP1-202ENST00000393452 PRIMA1Q86XR5 153 aa6.29□□□□□ -1.4
TDP1-202ENST00000393452 DAND5Q8N907 189 aa6.29□□□□□ -1.4
TDP1-202ENST00000393452 A0A087WZ39 114 aa6.28□□□□□ -1.4
TDP1-202ENST00000393452 DEFB4AO15263 64 aa6.28□□□□□ -1.4
TDP1-202ENST00000393452 SCGB1C2P0DMR2 95 aa6.28□□□□□ -1.4
TDP1-202ENST00000393452 IGHV4-30-4P0DP06 118 aa6.28□□□□□ -1.4
TDP1-202ENST00000393452 LINC00308Q8TCZ7 52 aa6.28□□□□□ -1.4
TDP1-202ENST00000393452 PPDPFQ9H3Y8 114 aa6.28□□□□□ -1.4
TDP1-202ENST00000393452 TRRAPQ9Y4A5 3859 aa6.28□□□□□ -1.4
TDP1-202ENST00000393452 NPC2P61916 151 aa6.28□□□□□ -1.4
TDP1-202ENST00000393452 LINC00959A0A1B0GUT2 108 aa6.27□□□□□ -1.41
TDP1-202ENST00000393452 H7C2G1 150 aa6.27□□□□□ -1.41
TDP1-202ENST00000393452 DAD1P61803 113 aa6.27□□□□□ -1.41
TDP1-202ENST00000393452 COX7B2Q8TF08 81 aa6.27□□□□□ -1.41
TDP1-202ENST00000393452 CELA1Q9UNI1 258 aa6.27□□□□□ -1.41
TDP1-202ENST00000393452 IGKV3OR2-268A0A0C4DH90 116 aa6.26□□□□□ -1.41
TDP1-202ENST00000393452 TRIAP1O43715 76 aa6.26□□□□□ -1.41
TDP1-202ENST00000393452 SOSTDC1Q6X4U4 206 aa6.26□□□□□ -1.41
TDP1-202ENST00000393452 COPS9Q8WXC6 57 aa6.26□□□□□ -1.41
TDP1-202ENST00000393452 TRAV26-1A0A087WT03 109 aa6.26□□□□□ -1.41
TDP1-202ENST00000393452 ATP5G1P05496 136 aa6.26□□□□□ -1.41
TDP1-202ENST00000393452 Q1RN00 199 aa6.26□□□□□ -1.41
TDP1-202ENST00000393452 ICOSQ9Y6W8 199 aa6.26□□□□□ -1.41
TDP1-202ENST00000393452 SPART-AS1P0CW21 52 aa6.25□□□□□ -1.41
TDP1-202ENST00000393452 MEIG1Q5JSS6 88 aa6.25□□□□□ -1.41
TDP1-202ENST00000393452 M0QXV9 152 aa6.25□□□□□ -1.41
TDP1-202ENST00000393452 SIGMAR1Q99720 223 aa6.25□□□□□ -1.41
TDP1-202ENST00000393452 A0A096LPF7 62 aa6.24□□□□□ -1.41
TDP1-202ENST00000393452 A0A0U1RRA0 63 aa6.24□□□□□ -1.41
TDP1-202ENST00000393452 TMEM262E9PQX1 116 aa6.24□□□□□ -1.41
TDP1-202ENST00000393452 J3QR89 54 aa6.24□□□□□ -1.41
TDP1-202ENST00000393452 SCGB1A1P11684 91 aa6.24□□□□□ -1.41
TDP1-202ENST00000393452 SHISA2Q6UWI4 295 aa6.24□□□□□ -1.41
TDP1-202ENST00000393452 LINC01600Q96MT4 127 aa6.24□□□□□ -1.41
TDP1-202ENST00000393452 RPL13AP40429 203 aaKnown RBP6.24□□□□□ -1.41
TDP1-202ENST00000393452 ATXN8Q156A1 80 aa6.24□□□□□ -1.41
TDP1-202ENST00000393452 KRTAP24-1Q3LI83 254 aa6.24□□□□□ -1.41
TDP1-202ENST00000393452 C5orf38Q86SI9 138 aa6.24□□□□□ -1.41
TDP1-202ENST00000393452 TEN1Q86WV5 123 aa6.24□□□□□ -1.41
TDP1-202ENST00000393452 GAGE12HA6NDE8 117 aa6.23□□□□□ -1.41
TDP1-202ENST00000393452 FOXI1Q12951 378 aa6.23□□□□□ -1.41
TDP1-202ENST00000393452 SS18Q15532 418 aa6.23□□□□□ -1.41
TDP1-202ENST00000393452 LINC01561Q8N1V8 128 aa6.23□□□□□ -1.41
TDP1-202ENST00000393452 COX6CP09669 75 aa6.23□□□□□ -1.41
TDP1-202ENST00000393452 OXLD1Q5BKU9 147 aa6.23□□□□□ -1.41
TDP1-202ENST00000393452 TOMM7Q9P0U1 55 aa6.23□□□□□ -1.41
TDP1-202ENST00000393452 C9JAW5 83 aa6.22□□□□□ -1.41
TDP1-202ENST00000393452 SLC25A20O43772 301 aa6.22□□□□□ -1.41
TDP1-202ENST00000393452 KRTAP10-11P60412 298 aa6.22□□□□□ -1.41
TDP1-202ENST00000393452 EGFEM1PQ0D2K5 195 aa6.22□□□□□ -1.41
TDP1-202ENST00000393452 MRPL23Q16540 153 aaKnown RBP6.22□□□□□ -1.41
TDP1-202ENST00000393452 LINC01620Q4KN68 170 aa6.22□□□□□ -1.41
TDP1-202ENST00000393452 IBA57-AS1B1ANH7 110 aa6.22□□□□□ -1.41
TDP1-202ENST00000393452 XCL1P47992 114 aa6.22□□□□□ -1.41
TDP1-202ENST00000393452 MIR7-3HGQ8N6C7 128 aa6.22□□□□□ -1.41
TDP1-202ENST00000393452 Q8IZM0 81 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms