RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CHKB-CPT1BH3BT56 60 aa5.6□□□□□ -1.51
VTI1A-201ENST00000393077 DEFB1P60022 68 aa5.6□□□□□ -1.51
VTI1A-201ENST00000393077 TNRC18O15417 2968 aaPredicted RBP5.6□□□□□ -1.51
VTI1A-201ENST00000393077 Q8N3U1 123 aa5.6□□□□□ -1.51
VTI1A-201ENST00000393077 LINC00574Q9H8X3 128 aa5.6□□□□□ -1.51
VTI1A-201ENST00000393077 TRBV10-3A0A0K0K1G6 114 aa5.6□□□□□ -1.51
VTI1A-201ENST00000393077 IGHV3-11P01762 117 aa5.6□□□□□ -1.51
VTI1A-201ENST00000393077 Q8N2B8 174 aa5.6□□□□□ -1.51
VTI1A-201ENST00000393077 SMIM11BQ8TCY0 68 aa5.6□□□□□ -1.51
VTI1A-201ENST00000393077 ZFAND3Q9H8U3 227 aa5.6□□□□□ -1.51
VTI1A-201ENST00000393077 A0A087WYN8 130 aa5.59□□□□□ -1.51
VTI1A-201ENST00000393077 TRBV6-5A0A0K0K1A5 114 aa5.59□□□□□ -1.51
VTI1A-201ENST00000393077 CFHR3Q02985 330 aa5.59□□□□□ -1.51
VTI1A-201ENST00000393077 MTORP42345 2549 aa5.59□□□□□ -1.51
VTI1A-201ENST00000393077 FP248Q71RG6 208 aaPredicted RBP5.59□□□□□ -1.51
VTI1A-201ENST00000393077 FAM19A3Q7Z5A8 133 aa5.59□□□□□ -1.51
VTI1A-201ENST00000393077 FAM110DQ8TAY7 271 aaPredicted RBP5.59□□□□□ -1.51
VTI1A-201ENST00000393077 PRYO14603 147 aa5.59□□□□□ -1.51
VTI1A-201ENST00000393077 BCE1O60756 84 aa5.59□□□□□ -1.51
VTI1A-201ENST00000393077 FAM218AQ96MZ4 157 aa5.59□□□□□ -1.52
VTI1A-201ENST00000393077 HIVEP2P31629 2446 aa5.58□□□□□ -1.52
VTI1A-201ENST00000393077 TRBV10-1A0A0K0K1A3 114 aa5.58□□□□□ -1.52
VTI1A-201ENST00000393077 KLKP1Q107X0 134 aa5.58□□□□□ -1.52
VTI1A-201ENST00000393077 PRR9Q5T870 116 aa5.58□□□□□ -1.52
VTI1A-201ENST00000393077 DSPP15924 2871 aaKnown RBP5.58□□□□□ -1.52
VTI1A-201ENST00000393077 M0QY20 66 aa5.58□□□□□ -1.52
VTI1A-201ENST00000393077 KAAG1Q9UBP8 84 aa5.58□□□□□ -1.52
VTI1A-201ENST00000393077 IGHV3OR16-12A0A075B7B8 117 aa5.58□□□□□ -1.52
VTI1A-201ENST00000393077 RNASE3P12724 160 aaKnown RBP5.58□□□□□ -1.52
VTI1A-201ENST00000393077 Q8N6K4 173 aa5.58□□□□□ -1.52
VTI1A-201ENST00000393077 PDE6GP18545 87 aa5.57□□□□□ -1.52
VTI1A-201ENST00000393077 SPINK13Q1W4C9 94 aa5.57□□□□□ -1.52
VTI1A-201ENST00000393077 ZFAND2AQ8N6M9 145 aa5.57□□□□□ -1.52
VTI1A-201ENST00000393077 IGHV3-16A0A0C4DH30 117 aa5.57□□□□□ -1.52
VTI1A-201ENST00000393077 A6NED7 52 aa5.57□□□□□ -1.52
VTI1A-201ENST00000393077 BPY2O14599 106 aa5.57□□□□□ -1.52
VTI1A-201ENST00000393077 PRR4Q16378 134 aa5.57□□□□□ -1.52
VTI1A-201ENST00000393077 RHPN1-AS1Q9BWJ2 59 aa5.57□□□□□ -1.52
VTI1A-201ENST00000393077 H3BUX3 64 aa5.57□□□□□ -1.52
VTI1A-201ENST00000393077 UBE2AP49459 152 aa5.57□□□□□ -1.52
VTI1A-201ENST00000393077 ITLN2Q8WWU7 325 aaPredicted RBP5.56□□□□□ -1.52
VTI1A-201ENST00000393077 NDUFS5O43920 106 aa5.56□□□□□ -1.52
VTI1A-201ENST00000393077 LITAFQ99732 161 aa5.56□□□□□ -1.52
VTI1A-201ENST00000393077 PRR15Q8IV56 129 aa5.55□□□□□ -1.52
VTI1A-201ENST00000393077 BOD1L1Q8NFC6 3051 aa5.55□□□□□ -1.52
VTI1A-201ENST00000393077 G3V318 75 aa5.55□□□□□ -1.52
VTI1A-201ENST00000393077 MINOS1Q5TGZ0 78 aa5.55□□□□□ -1.52
VTI1A-201ENST00000393077 MINOS1-NBL1R4GNA1 71 aa5.55□□□□□ -1.52
VTI1A-201ENST00000393077 B4DSR2 109 aa5.55□□□□□ -1.52
VTI1A-201ENST00000393077 TRAV10A0A0B4J240 114 aa5.55□□□□□ -1.52
VTI1A-201ENST00000393077 RNF223E7ERA6 249 aa5.55□□□□□ -1.52
VTI1A-201ENST00000393077 ATP6V0E1O15342 81 aa5.55□□□□□ -1.52
VTI1A-201ENST00000393077 FBXL19-AS1Q494R0 122 aa5.55□□□□□ -1.52
VTI1A-201ENST00000393077 APOC4P55056 127 aa5.54□□□□□ -1.52
VTI1A-201ENST00000393077 LINC01547P58512 204 aaPredicted RBP5.54□□□□□ -1.52
VTI1A-201ENST00000393077 AKAP13Q12802 2813 aa5.54□□□□□ -1.52
VTI1A-201ENST00000393077 CLPSL1A2RUU4 121 aa5.54□□□□□ -1.52
VTI1A-201ENST00000393077 C19orf84I3L1E1 186 aa5.54□□□□□ -1.52
VTI1A-201ENST00000393077 IGLV1-47P01700 117 aa5.54□□□□□ -1.52
VTI1A-201ENST00000393077 C11orf44Q8N8P7 122 aa5.54□□□□□ -1.52
VTI1A-201ENST00000393077 ACANP16112 2415 aa5.54□□□□□ -1.52
VTI1A-201ENST00000393077 DMDP11532 3685 aa5.54□□□□□ -1.52
VTI1A-201ENST00000393077 NANOS2P60321 138 aaKnown RBP5.54□□□□□ -1.52
VTI1A-201ENST00000393077 MAP1AP78559 2803 aaPredicted RBP5.54□□□□□ -1.52
VTI1A-201ENST00000393077 INSP01308 110 aa5.53□□□□□ -1.52
VTI1A-201ENST00000393077 DOPEY1Q5JWR5 2465 aa5.53□□□□□ -1.52
VTI1A-201ENST00000393077 IGHV4-61A0A0C4DH41 118 aa5.53□□□□□ -1.52
VTI1A-201ENST00000393077 MSMBP08118 114 aa5.53□□□□□ -1.52
VTI1A-201ENST00000393077 LINC00467Q9BRT7 94 aa5.53□□□□□ -1.52
VTI1A-201ENST00000393077 LYPD5Q6UWN5 251 aa5.53□□□□□ -1.52
VTI1A-201ENST00000393077 TM2D3Q9BRN9 247 aa5.53□□□□□ -1.52
VTI1A-201ENST00000393077 ZFP36P26651 326 aaKnown RBP5.52□□□□□ -1.53
VTI1A-201ENST00000393077 FLNBO75369 2602 aaKnown RBP5.52□□□□□ -1.53
VTI1A-201ENST00000393077 Q6ZVQ6 151 aa5.52□□□□□ -1.53
VTI1A-201ENST00000393077 Q6ZTI0 123 aa5.52□□□□□ -1.53
VTI1A-201ENST00000393077 KTN1-AS1Q86SY8 53 aa5.52□□□□□ -1.53
VTI1A-201ENST00000393077 MUC3AQ02505 3323 aa5.51□□□□□ -1.53
VTI1A-201ENST00000393077 NTM-AS1Q6ZSK4 140 aa5.51□□□□□ -1.53
VTI1A-201ENST00000393077 IGHV4-30-2A0A087WSY4 118 aa5.51□□□□□ -1.53
VTI1A-201ENST00000393077 IGHV3-53P01767 116 aa5.51□□□□□ -1.53
VTI1A-201ENST00000393077 LINC00337Q8N6G1 96 aa5.51□□□□□ -1.53
VTI1A-201ENST00000393077 NPBQ8NG41 125 aa5.51□□□□□ -1.53
VTI1A-201ENST00000393077 FN1P02751 2386 aaKnown RBP5.51□□□□□ -1.53
VTI1A-201ENST00000393077 RBM12B-AS1Q9P1G2 102 aa5.51□□□□□ -1.53
VTI1A-201ENST00000393077 VPREB1P12018 145 aa5.5□□□□□ -1.53
VTI1A-201ENST00000393077 NDUFA4O00483 81 aa5.5□□□□□ -1.53
VTI1A-201ENST00000393077 MP68P56378 58 aa5.5□□□□□ -1.53
VTI1A-201ENST00000393077 PRR15LQ9BU68 103 aa5.5□□□□□ -1.53
VTI1A-201ENST00000393077 TRGV1A0A0A0MS02 117 aa5.5□□□□□ -1.53
VTI1A-201ENST00000393077 IGHV7-81A0A0B4J1V7 117 aa5.5□□□□□ -1.53
VTI1A-201ENST00000393077 CCL18P55774 89 aa5.5□□□□□ -1.53
VTI1A-201ENST00000393077 DSCR9P59020 149 aa5.5□□□□□ -1.53
VTI1A-201ENST00000393077 UNQ9165/PRO28630Q6UXU0 137 aa5.5□□□□□ -1.53
VTI1A-201ENST00000393077 LINC00269Q8N2A0 174 aa5.5□□□□□ -1.53
VTI1A-201ENST00000393077 H3BS24 57 aa5.49□□□□□ -1.53
VTI1A-201ENST00000393077 KIF25-AS1Q9Y6Z4 181 aa5.49□□□□□ -1.53
VTI1A-201ENST00000393077 HIGD2BQ4VC39 106 aa5.49□□□□□ -1.53
VTI1A-201ENST00000393077 Q9UF83 564 aa5.49□□□□□ -1.53
VTI1A-201ENST00000393077 MRGPRG-AS1Q2M3A8 158 aa5.49□□□□□ -1.53
VTI1A-201ENST00000393077 Q8N814 137 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms