RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 LINC00269Q8N2A0 174 aa14.47□□□□□ -0.09
SHANK1-203ENST00000391813 HILS1P60008 231 aa14.47□□□□□ -0.09
SHANK1-203ENST00000391813 TSPEAR-AS2P59090 65 aa14.46□□□□□ -0.09
SHANK1-203ENST00000391813 ESM1Q9NQ30 184 aa14.46□□□□□ -0.09
SHANK1-203ENST00000391813 RPL28P46779 137 aaKnown RBP14.46□□□□□ -0.1
SHANK1-203ENST00000391813 CCKP06307 115 aa14.45□□□□□ -0.1
SHANK1-203ENST00000391813 JMJD1CQ15652 2540 aa14.44□□□□□ -0.1
SHANK1-203ENST00000391813 TRBV7-7A0A0K0K1E9 115 aa14.44□□□□□ -0.1
SHANK1-203ENST00000391813 CCL18P55774 89 aa14.43□□□□□ -0.1
SHANK1-203ENST00000391813 Q6ZQY7 126 aa14.43□□□□□ -0.1
SHANK1-203ENST00000391813 DEFB114Q30KQ6 69 aa14.43□□□□□ -0.1
SHANK1-203ENST00000391813 MUC7Q8TAX7 377 aa14.42□□□□□ -0.1
SHANK1-203ENST00000391813 KLK5Q9Y337 293 aaPredicted RBP14.41□□□□□ -0.1
SHANK1-203ENST00000391813 MIFP14174 115 aa14.41□□□□□ -0.1
SHANK1-203ENST00000391813 MRGPRG-AS1Q2M3A8 158 aa14.4□□□□□ -0.1
SHANK1-203ENST00000391813 WDR87Q6ZQQ6 2873 aa14.4□□□□□ -0.1
SHANK1-203ENST00000391813 LINC00242Q5T6M2 205 aa14.39□□□□□ -0.11
SHANK1-203ENST00000391813 USP9XQ93008 2570 aaPredicted RBP14.39□□□□□ -0.11
SHANK1-203ENST00000391813 AGRNO00468 2067 aa14.39□□□□□ -0.11
SHANK1-203ENST00000391813 LYRM9A8MSI8 78 aa14.38□□□□□ -0.11
SHANK1-203ENST00000391813 CSDC2Q9Y534 153 aaKnown RBP14.38□□□□□ -0.11
SHANK1-203ENST00000391813 NTM-AS1Q6ZSK4 140 aa14.38□□□□□ -0.11
SHANK1-203ENST00000391813 DCANP1Q8TF63 244 aa14.38□□□□□ -0.11
SHANK1-203ENST00000391813 COX17Q14061 63 aa14.38□□□□□ -0.11
SHANK1-203ENST00000391813 ZNF462Q96JM2 2506 aa14.37□□□□□ -0.11
SHANK1-203ENST00000391813 AMELXQ99217 191 aa14.37□□□□□ -0.11
SHANK1-203ENST00000391813 LINC01546A6NGU7 62 aa14.37□□□□□ -0.11
SHANK1-203ENST00000391813 CDC42SE2Q9NRR3 84 aa14.37□□□□□ -0.11
SHANK1-203ENST00000391813 DEFB135Q30KP9 77 aa14.37□□□□□ -0.11
SHANK1-203ENST00000391813 CD164L2Q6UWJ8 174 aa14.37□□□□□ -0.11
SHANK1-203ENST00000391813 KRTAP10-9P60411 292 aa14.37□□□□□ -0.11
SHANK1-203ENST00000391813 PRO0461Q9UI25 63 aa14.37□□□□□ -0.11
SHANK1-203ENST00000391813 H0Y9J4 135 aa14.36□□□□□ -0.11
SHANK1-203ENST00000391813 LINC01006Q8NI28 216 aa14.36□□□□□ -0.11
SHANK1-203ENST00000391813 BBC3Q96PG8 261 aaPredicted RBP14.36□□□□□ -0.11
SHANK1-203ENST00000391813 A0A087WVE0 104 aa14.36□□□□□ -0.11
SHANK1-203ENST00000391813 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.35□□□□□ -0.11
SHANK1-203ENST00000391813 ABCA12Q86UK0 2595 aa14.35□□□□□ -0.11
SHANK1-203ENST00000391813 SMIM1B2RUZ4 78 aa14.35□□□□□ -0.11
SHANK1-203ENST00000391813 ADAMTSL4-AS1Q5T5F5 129 aa14.35□□□□□ -0.11
SHANK1-203ENST00000391813 TLN2Q9Y4G6 2542 aa14.34□□□□□ -0.11
SHANK1-203ENST00000391813 UBE2AP49459 152 aa14.34□□□□□ -0.11
SHANK1-203ENST00000391813 LRRK2Q5S007 2527 aa14.34□□□□□ -0.11
SHANK1-203ENST00000391813 ZNF702PQ9H963 129 aa14.34□□□□□ -0.11
SHANK1-203ENST00000391813 USP9YO00507 2555 aaPredicted RBP14.34□□□□□ -0.11
SHANK1-203ENST00000391813 Q8IZM0 81 aa14.33□□□□□ -0.11
SHANK1-203ENST00000391813 LINC00959A0A1B0GUT2 108 aa14.33□□□□□ -0.12
SHANK1-203ENST00000391813 XAGE1AQ9HD64 81 aa14.32□□□□□ -0.12
SHANK1-203ENST00000391813 SMCPP49901 116 aaPredicted RBP14.32□□□□□ -0.12
SHANK1-203ENST00000391813 PPDPFQ9H3Y8 114 aa14.31□□□□□ -0.12
SHANK1-203ENST00000391813 EPG5Q9HCE0 2579 aa14.31□□□□□ -0.12
SHANK1-203ENST00000391813 F8W735 103 aaPredicted RBP14.3□□□□□ -0.12
SHANK1-203ENST00000391813 C1orf158Q8N1D5 194 aa14.3□□□□□ -0.12
SHANK1-203ENST00000391813 IGLV1-40P01703 118 aa14.3□□□□□ -0.12
SHANK1-203ENST00000391813 DEFB4AO15263 64 aa14.29□□□□□ -0.12
SHANK1-203ENST00000391813 Q8N814 137 aa14.29□□□□□ -0.12
SHANK1-203ENST00000391813 LOC107984640A0A0U1RRK4 108 aa14.29□□□□□ -0.12
SHANK1-203ENST00000391813 C3orf84H3BNL1 204 aa14.29□□□□□ -0.12
SHANK1-203ENST00000391813 COL4A2P08572 1712 aa14.28□□□□□ -0.12
SHANK1-203ENST00000391813 RPS28P62857 69 aaKnown RBP14.28□□□□□ -0.12
SHANK1-203ENST00000391813 M0R378 163 aa14.27□□□□□ -0.12
SHANK1-203ENST00000391813 CHCHD7Q9BUK0 85 aa14.27□□□□□ -0.12
SHANK1-203ENST00000391813 CPAMD8Q8IZJ3 1885 aa14.27□□□□□ -0.12
SHANK1-203ENST00000391813 CRYGAP11844 174 aa14.27□□□□□ -0.13
SHANK1-203ENST00000391813 A0A1W2PPR1 153 aa14.26□□□□□ -0.13
SHANK1-203ENST00000391813 IGKV4-1P06312 121 aa14.26□□□□□ -0.13
SHANK1-203ENST00000391813 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.26□□□□□ -0.13
SHANK1-203ENST00000391813 SBSPONQ8IVN8 264 aa14.25□□□□□ -0.13
SHANK1-203ENST00000391813 DHRS4-AS1Q9P1J3 65 aa14.25□□□□□ -0.13
SHANK1-203ENST00000391813 ZNF73O43830 326 aaPredicted RBP14.25□□□□□ -0.13
SHANK1-203ENST00000391813 A6NED7 52 aa14.25□□□□□ -0.13
SHANK1-203ENST00000391813 HIGD2AQ9BW72 106 aa14.24□□□□□ -0.13
SHANK1-203ENST00000391813 A0A087WYN8 130 aa14.24□□□□□ -0.13
SHANK1-203ENST00000391813 ZNF580Q9UK33 172 aa14.24□□□□□ -0.13
SHANK1-203ENST00000391813 TRBV10-3A0A0K0K1G6 114 aa14.23□□□□□ -0.13
SHANK1-203ENST00000391813 C11orf45Q8TAV5 145 aa14.23□□□□□ -0.13
SHANK1-203ENST00000391813 GOLGB1Q14789 3259 aaKnown RBP14.23□□□□□ -0.13
SHANK1-203ENST00000391813 B9D2Q9BPU9 175 aa14.23□□□□□ -0.13
SHANK1-203ENST00000391813 AVPP01185 164 aa14.23□□□□□ -0.13
SHANK1-203ENST00000391813 PKD1L2Q7Z442 2459 aa14.22□□□□□ -0.13
SHANK1-203ENST00000391813 A0A087WZ39 114 aa14.22□□□□□ -0.13
SHANK1-203ENST00000391813 LINC00846Q9NV44 126 aa14.22□□□□□ -0.13
SHANK1-203ENST00000391813 SEC61GP60059 68 aa14.22□□□□□ -0.13
SHANK1-203ENST00000391813 Q8N3U1 123 aa14.22□□□□□ -0.13
SHANK1-203ENST00000391813 PRO0628Q9UI54 55 aa14.21□□□□□ -0.13
SHANK1-203ENST00000391813 SYCNQ0VAF6 134 aa14.2□□□□□ -0.14
SHANK1-203ENST00000391813 WFDC10BQ8IUB3 73 aa14.2□□□□□ -0.14
SHANK1-203ENST00000391813 BRI3O95415 125 aa14.2□□□□□ -0.14
SHANK1-203ENST00000391813 PRYO14603 147 aa14.19□□□□□ -0.14
SHANK1-203ENST00000391813 C10orf99Q6UWK7 81 aa14.19□□□□□ -0.14
SHANK1-203ENST00000391813 COX6A2Q02221 97 aa14.18□□□□□ -0.14
SHANK1-203ENST00000391813 SOSTDC1Q6X4U4 206 aa14.18□□□□□ -0.14
SHANK1-203ENST00000391813 KIF25-AS1Q9Y6Z4 181 aa14.17□□□□□ -0.14
SHANK1-203ENST00000391813 PRR4Q16378 134 aa14.16□□□□□ -0.14
SHANK1-203ENST00000391813 LOC100131303A0A0U1RQF7 123 aa14.16□□□□□ -0.14
SHANK1-203ENST00000391813 SMR3AQ99954 134 aa14.16□□□□□ -0.14
SHANK1-203ENST00000391813 PRR15LQ9BU68 103 aa14.15□□□□□ -0.14
SHANK1-203ENST00000391813 FAM19A1Q7Z5A9 133 aa14.15□□□□□ -0.14
SHANK1-203ENST00000391813 BCE1O60756 84 aa14.15□□□□□ -0.14
SHANK1-203ENST00000391813 PMAIP1Q13794 54 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms