RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 REV3LO60673 3130 aa-1.27□□□□□ -2.61
RNU6-541P-201ENST00000384709 F8VRH5 84 aa-1.27□□□□□ -2.61
RNU6-541P-201ENST00000384709 APOC3P02656 99 aa-1.27□□□□□ -2.61
RNU6-541P-201ENST00000384709 RPS25P62851 125 aaKnown RBP-1.27□□□□□ -2.61
RNU6-541P-201ENST00000384709 C12orf73Q69YU5 71 aa-1.27□□□□□ -2.61
RNU6-541P-201ENST00000384709 TCEAL4Q96EI5 215 aa-1.27□□□□□ -2.61
RNU6-541P-201ENST00000384709 ANKRD30AQ9BXX3 1397 aa-1.27□□□□□ -2.61
RNU6-541P-201ENST00000384709 MAGI1Q96QZ7 1491 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-541P-201ENST00000384709 HTTP42858 3142 aa-1.27□□□□□ -2.61
RNU6-541P-201ENST00000384709 TACC2O95359 2948 aa-1.28□□□□□ -2.61
RNU6-541P-201ENST00000384709 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.28□□□□□ -2.61
RNU6-541P-201ENST00000384709 POLA1P09884 1462 aaPredicted RBP-1.28□□□□□ -2.61
RNU6-541P-201ENST00000384709 PIGBOS1A0A0B4J2F0 54 aa-1.28□□□□□ -2.61
RNU6-541P-201ENST00000384709 IGLC7A0M8Q6 106 aa-1.28□□□□□ -2.61
RNU6-541P-201ENST00000384709 COPZ1P61923 177 aa-1.28□□□□□ -2.61
RNU6-541P-201ENST00000384709 DEFB105AQ8NG35 78 aa-1.28□□□□□ -2.61
RNU6-541P-201ENST00000384709 CCDC167Q9P0B6 97 aa-1.28□□□□□ -2.61
RNU6-541P-201ENST00000384709 ZZEF1O43149 2961 aa-1.29□□□□□ -2.62
RNU6-541P-201ENST00000384709 MGST2Q99735 147 aa-1.29□□□□□ -2.62
RNU6-541P-201ENST00000384709 DYNLRB1Q9NP97 96 aa-1.29□□□□□ -2.62
RNU6-541P-201ENST00000384709 TEP1Q99973 2627 aaKnown RBP-1.29□□□□□ -2.62
RNU6-541P-201ENST00000384709 MUC17Q685J3 4493 aa-1.29□□□□□ -2.62
RNU6-541P-201ENST00000384709 DNAH9Q9NYC9 4486 aa-1.3□□□□□ -2.62
RNU6-541P-201ENST00000384709 TRBV7-4A0A0J9YYF1 115 aa-1.3□□□□□ -2.62
RNU6-541P-201ENST00000384709 SMCO1Q147U7 214 aa-1.3□□□□□ -2.62
RNU6-541P-201ENST00000384709 KLK9Q2XQG4 91 aa-1.3□□□□□ -2.62
RNU6-541P-201ENST00000384709 LSM10Q969L4 123 aaKnown RBP-1.3□□□□□ -2.62
RNU6-541P-201ENST00000384709 SPRR4Q96PI1 79 aa-1.3□□□□□ -2.62
RNU6-541P-201ENST00000384709 RGPD2P0DJD1 1756 aa-1.3□□□□□ -2.62
RNU6-541P-201ENST00000384709 COL14A1Q05707 1796 aaKnown RBP-1.3□□□□□ -2.62
RNU6-541P-201ENST00000384709 LYSTQ99698 3801 aa-1.3□□□□□ -2.62
RNU6-541P-201ENST00000384709 HMGXB3Q12766 1538 aa-1.3□□□□□ -2.62
RNU6-541P-201ENST00000384709 VPS13DQ5THJ4 4388 aa-1.31□□□□□ -2.62
RNU6-541P-201ENST00000384709 TRBV7-3A0A075B6L6 115 aa-1.31□□□□□ -2.62
RNU6-541P-201ENST00000384709 TMEM263Q8WUH6 116 aaKnown RBP-1.31□□□□□ -2.62
RNU6-541P-201ENST00000384709 FXYD6Q9H0Q3 95 aa-1.31□□□□□ -2.62
RNU6-541P-201ENST00000384709 COPZ2Q9P299 210 aa-1.31□□□□□ -2.62
RNU6-541P-201ENST00000384709 USP9YO00507 2555 aaPredicted RBP-1.31□□□□□ -2.62
RNU6-541P-201ENST00000384709 SMG6Q86US8 1419 aaKnown RBP-1.32□□□□□ -2.62
RNU6-541P-201ENST00000384709 SETBP1Q9Y6X0 1596 aa-1.32□□□□□ -2.62
RNU6-541P-201ENST00000384709 LINC00959A0A1B0GUT2 108 aa-1.32□□□□□ -2.62
RNU6-541P-201ENST00000384709 HMGN4O00479 90 aa-1.32□□□□□ -2.62
RNU6-541P-201ENST00000384709 HIST1H1DP16402 221 aaKnown RBP-1.32□□□□□ -2.62
RNU6-541P-201ENST00000384709 SMIM21Q3B7S5 101 aa-1.32□□□□□ -2.62
RNU6-541P-201ENST00000384709 TSTD1Q8NFU3 115 aa-1.32□□□□□ -2.62
RNU6-541P-201ENST00000384709 ANP32BQ92688 251 aaKnown RBP-1.32□□□□□ -2.62
RNU6-541P-201ENST00000384709 RERGLQ9H628 205 aa-1.32□□□□□ -2.62
RNU6-541P-201ENST00000384709 TPT1P8Q9HAU6 139 aa-1.32□□□□□ -2.62
RNU6-541P-201ENST00000384709 COL4A6Q14031 1691 aa-1.32□□□□□ -2.62
RNU6-541P-201ENST00000384709 ITPR3Q14573 2671 aa-1.33□□□□□ -2.62
RNU6-541P-201ENST00000384709 LOC285095A0A1B0GVY8 99 aa-1.33□□□□□ -2.62
RNU6-541P-201ENST00000384709 SERP1Q9Y6X1 66 aa-1.33□□□□□ -2.62
RNU6-541P-201ENST00000384709 CPSF1Q10570 1443 aaKnown RBP-1.33□□□□□ -2.62
RNU6-541P-201ENST00000384709 DIP2CQ9Y2E4 1556 aa-1.34□□□□□ -2.62
RNU6-541P-201ENST00000384709 MYO18BQ8IUG5 2567 aa-1.34□□□□□ -2.62
RNU6-541P-201ENST00000384709 SFT2D2O95562 160 aa-1.34□□□□□ -2.62
RNU6-541P-201ENST00000384709 C10orf113Q5VZT2 155 aa-1.34□□□□□ -2.62
RNU6-541P-201ENST00000384709 AKAP14Q86UN6 197 aa-1.34□□□□□ -2.62
RNU6-541P-201ENST00000384709 COPS9Q8WXC6 57 aa-1.34□□□□□ -2.62
RNU6-541P-201ENST00000384709 CUL7Q14999 1698 aa-1.35□□□□□ -2.63
RNU6-541P-201ENST00000384709 MGPP08493 103 aa-1.35□□□□□ -2.63
RNU6-541P-201ENST00000384709 DEFB135Q30KP9 77 aa-1.35□□□□□ -2.63
RNU6-541P-201ENST00000384709 LZICQ8WZA0 190 aa-1.35□□□□□ -2.63
RNU6-541P-201ENST00000384709 COX8AP10176 69 aa-1.36□□□□□ -2.63
RNU6-541P-201ENST00000384709 DR1Q01658 176 aa-1.36□□□□□ -2.63
RNU6-541P-201ENST00000384709 TSLPQ969D9 159 aa-1.36□□□□□ -2.63
RNU6-541P-201ENST00000384709 PDCD10Q9BUL8 212 aa-1.36□□□□□ -2.63
RNU6-541P-201ENST00000384709 SNRNP25Q9BV90 132 aaKnown RBP-1.36□□□□□ -2.63
RNU6-541P-201ENST00000384709 SPANXDQ9BXN6 97 aa-1.36□□□□□ -2.63
RNU6-541P-201ENST00000384709 EHBP1L1Q8N3D4 1523 aa-1.36□□□□□ -2.63
RNU6-541P-201ENST00000384709 PTPN23Q9H3S7 1636 aa-1.37□□□□□ -2.63
RNU6-541P-201ENST00000384709 MRC2Q9UBG0 1479 aa-1.37□□□□□ -2.63
RNU6-541P-201ENST00000384709 LAMA1P25391 3075 aa-1.37□□□□□ -2.63
RNU6-541P-201ENST00000384709 C1orf167Q5SNV9 1468 aa-1.37□□□□□ -2.63
RNU6-541P-201ENST00000384709 CHD1O14646 1710 aa-1.37□□□□□ -2.63
RNU6-541P-201ENST00000384709 ADAMTS12P58397 1594 aa-1.38□□□□□ -2.63
RNU6-541P-201ENST00000384709 PRRC2CQ9Y520 2896 aaKnown RBP-1.38□□□□□ -2.63
RNU6-541P-201ENST00000384709 MRPL54Q6P161 138 aaKnown RBP-1.38□□□□□ -2.63
RNU6-541P-201ENST00000384709 MYOZ3Q8TDC0 251 aa-1.38□□□□□ -2.63
RNU6-541P-201ENST00000384709 USMG5Q96IX5 58 aa-1.38□□□□□ -2.63
RNU6-541P-201ENST00000384709 CDC42SE2Q9NRR3 84 aa-1.38□□□□□ -2.63
RNU6-541P-201ENST00000384709 PDE4DIPQ5VU43 2346 aa-1.38□□□□□ -2.63
RNU6-541P-201ENST00000384709 KIF20BQ96Q89 1820 aa-1.38□□□□□ -2.63
RNU6-541P-201ENST00000384709 TNRC18O15417 2968 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-541P-201ENST00000384709 ARPC4P59998 168 aa-1.39□□□□□ -2.63
RNU6-541P-201ENST00000384709 BTG2P78543 158 aa-1.39□□□□□ -2.63
RNU6-541P-201ENST00000384709 NXT2Q9NPJ8 142 aaKnown RBP-1.39□□□□□ -2.63
RNU6-541P-201ENST00000384709 FASNP49327 2511 aaKnown RBP-1.39□□□□□ -2.63
RNU6-541P-201ENST00000384709 LRRC37AA6NMS7 1700 aa-1.4□□□□□ -2.63
RNU6-541P-201ENST00000384709 HECTD1Q9ULT8 2610 aa-1.4□□□□□ -2.63
RNU6-541P-201ENST00000384709 SYS1-DBNDD2H3BUS1 97 aa-1.4□□□□□ -2.63
RNU6-541P-201ENST00000384709 IGLC1P0CG04 106 aa-1.4□□□□□ -2.63
RNU6-541P-201ENST00000384709 WHAMMP3Q1A5X7 153 aa-1.4□□□□□ -2.63
RNU6-541P-201ENST00000384709 COMMD6Q7Z4G1 85 aa-1.4□□□□□ -2.63
RNU6-541P-201ENST00000384709 PPP3R2Q96LZ3 170 aa-1.4□□□□□ -2.63
RNU6-541P-201ENST00000384709 SPRR2FQ96RM1 72 aa-1.4□□□□□ -2.63
RNU6-541P-201ENST00000384709 NAA60Q9H7X0 242 aa-1.4□□□□□ -2.63
RNU6-541P-201ENST00000384709 PAIP2BQ9ULR5 123 aaKnown RBP-1.4□□□□□ -2.63
RNU6-541P-201ENST00000384709 MBD5Q9P267 1494 aa-1.4□□□□□ -2.63
RNU6-541P-201ENST00000384709 SHPRHQ149N8 1683 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms