RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 SEC61GP60059 68 aa13.56□□□□□ -0.24
SMARCD1-201ENST00000381513 BLCAPP62952 87 aa13.55□□□□□ -0.24
SMARCD1-201ENST00000381513 FP248Q71RG6 208 aaPredicted RBP13.55□□□□□ -0.24
SMARCD1-201ENST00000381513 CCL18P55774 89 aa13.55□□□□□ -0.24
SMARCD1-201ENST00000381513 C1orf195Q5TG92 126 aa13.55□□□□□ -0.24
SMARCD1-201ENST00000381513 RIF1Q5UIP0 2472 aaKnown RBP13.54□□□□□ -0.24
SMARCD1-201ENST00000381513 HAMPP81172 84 aa13.54□□□□□ -0.24
SMARCD1-201ENST00000381513 NBL1P41271 181 aa13.54□□□□□ -0.24
SMARCD1-201ENST00000381513 Q96MF0 132 aa13.54□□□□□ -0.24
SMARCD1-201ENST00000381513 CFHR3Q02985 330 aa13.53□□□□□ -0.24
SMARCD1-201ENST00000381513 LYPD5Q6UWN5 251 aa13.53□□□□□ -0.24
SMARCD1-201ENST00000381513 TRAV7A0A075B6U4 112 aa13.52□□□□□ -0.25
SMARCD1-201ENST00000381513 IGHV3-53P01767 116 aa13.52□□□□□ -0.25
SMARCD1-201ENST00000381513 C11orf68Q9H3H3 251 aaKnown RBP13.52□□□□□ -0.25
SMARCD1-201ENST00000381513 JMJD7-PLA2G4BH0Y9G9 81 aa13.51□□□□□ -0.25
SMARCD1-201ENST00000381513 Q6ZTI0 123 aa13.51□□□□□ -0.25
SMARCD1-201ENST00000381513 COX7B2Q8TF08 81 aa13.51□□□□□ -0.25
SMARCD1-201ENST00000381513 K7EQG2 157 aa13.51□□□□□ -0.25
SMARCD1-201ENST00000381513 C11orf72Q8NBR9 251 aa13.51□□□□□ -0.25
SMARCD1-201ENST00000381513 AVPP01185 164 aa13.51□□□□□ -0.25
SMARCD1-201ENST00000381513 MPLKIPQ8TAP9 179 aa13.51□□□□□ -0.25
SMARCD1-201ENST00000381513 SS18Q15532 418 aa13.5□□□□□ -0.25
SMARCD1-201ENST00000381513 C16orf95Q9H693 158 aa13.5□□□□□ -0.25
SMARCD1-201ENST00000381513 K7EMT4 169 aa13.49□□□□□ -0.25
SMARCD1-201ENST00000381513 CSPG4Q6UVK1 2322 aa13.49□□□□□ -0.25
SMARCD1-201ENST00000381513 TRBV7-6A0A0J9YX20 115 aa13.49□□□□□ -0.25
SMARCD1-201ENST00000381513 H3BUX3 64 aa13.49□□□□□ -0.25
SMARCD1-201ENST00000381513 UBE2L6O14933 153 aa13.48□□□□□ -0.25
SMARCD1-201ENST00000381513 COL12A1Q99715 3063 aa13.48□□□□□ -0.25
SMARCD1-201ENST00000381513 DEFB131AP59861 70 aa13.47□□□□□ -0.25
SMARCD1-201ENST00000381513 TRAV10A0A0B4J240 114 aa13.47□□□□□ -0.25
SMARCD1-201ENST00000381513 EPM2AB3EWF7 344 aa13.47□□□□□ -0.25
SMARCD1-201ENST00000381513 CCL21O00585 134 aa13.47□□□□□ -0.25
SMARCD1-201ENST00000381513 ZFHX2Q9C0A1 2572 aaPredicted RBP13.46□□□□□ -0.25
SMARCD1-201ENST00000381513 BPESC1Q9GZL8 116 aa13.46□□□□□ -0.25
SMARCD1-201ENST00000381513 ZFHX3Q15911 3703 aa13.46□□□□□ -0.25
SMARCD1-201ENST00000381513 CELSR1Q9NYQ6 3014 aa13.46□□□□□ -0.25
SMARCD1-201ENST00000381513 CDC42SE2Q9NRR3 84 aa13.45□□□□□ -0.26
SMARCD1-201ENST00000381513 H3BUA1 57 aa13.45□□□□□ -0.26
SMARCD1-201ENST00000381513 Q8NA96 180 aa13.45□□□□□ -0.26
SMARCD1-201ENST00000381513 TMEM256-PLSCR3K7ERE1 68 aa13.44□□□□□ -0.26
SMARCD1-201ENST00000381513 PRB1P04280 392 aa13.44□□□□□ -0.26
SMARCD1-201ENST00000381513 CDSNQ15517 529 aa13.44□□□□□ -0.26
SMARCD1-201ENST00000381513 KLKP1Q107X0 134 aa13.43□□□□□ -0.26
SMARCD1-201ENST00000381513 TRBV10-3A0A0K0K1G6 114 aa13.43□□□□□ -0.26
SMARCD1-201ENST00000381513 TRGV1A0A0A0MS02 117 aa13.41□□□□□ -0.26
SMARCD1-201ENST00000381513 C10orf99Q6UWK7 81 aa13.41□□□□□ -0.26
SMARCD1-201ENST00000381513 OTOGLQ3ZCN5 2332 aa13.41□□□□□ -0.26
SMARCD1-201ENST00000381513 MAP1AP78559 2803 aaPredicted RBP13.41□□□□□ -0.26
SMARCD1-201ENST00000381513 C11orf71Q6IPW1 123 aa13.41□□□□□ -0.26
SMARCD1-201ENST00000381513 NTM-AS1Q6ZSK4 140 aa13.41□□□□□ -0.26
SMARCD1-201ENST00000381513 LAMTOR3Q9UHA4 124 aa13.4□□□□□ -0.26
SMARCD1-201ENST00000381513 PRR3P79522 188 aaKnown RBP13.4□□□□□ -0.26
SMARCD1-201ENST00000381513 Q8N814 137 aa13.39□□□□□ -0.27
SMARCD1-201ENST00000381513 TRBV6-4A0A1B0GX49 114 aa13.39□□□□□ -0.27
SMARCD1-201ENST00000381513 LINC01547P58512 204 aaPredicted RBP13.38□□□□□ -0.27
SMARCD1-201ENST00000381513 LMO4P61968 165 aa13.38□□□□□ -0.27
SMARCD1-201ENST00000381513 SCXQ7RTU7 201 aa13.38□□□□□ -0.27
SMARCD1-201ENST00000381513 C6orf226Q5I0X4 101 aa13.37□□□□□ -0.27
SMARCD1-201ENST00000381513 SPG11Q96JI7 2443 aa13.37□□□□□ -0.27
SMARCD1-201ENST00000381513 IGLV1-40P01703 118 aa13.37□□□□□ -0.27
SMARCD1-201ENST00000381513 IBA57-AS1B1ANH7 110 aa13.37□□□□□ -0.27
SMARCD1-201ENST00000381513 HRNRQ86YZ3 2850 aaPredicted RBP13.37□□□□□ -0.27
SMARCD1-201ENST00000381513 IGHV4-38-2P0DP08 117 aa13.36□□□□□ -0.27
SMARCD1-201ENST00000381513 FAM19A3Q7Z5A8 133 aa13.36□□□□□ -0.27
SMARCD1-201ENST00000381513 TM2D3Q9BRN9 247 aa13.35□□□□□ -0.27
SMARCD1-201ENST00000381513 Q8N3U1 123 aa13.35□□□□□ -0.27
SMARCD1-201ENST00000381513 KHDC1LQ5JSQ8 128 aa13.35□□□□□ -0.27
SMARCD1-201ENST00000381513 LINC00482Q8N8I6 264 aa13.35□□□□□ -0.27
SMARCD1-201ENST00000381513 MIFP14174 115 aa13.34□□□□□ -0.27
SMARCD1-201ENST00000381513 K7EQD1 137 aa13.34□□□□□ -0.27
SMARCD1-201ENST00000381513 M0R2N4 97 aa13.33□□□□□ -0.28
SMARCD1-201ENST00000381513 UBE2E2Q96LR5 201 aa13.33□□□□□ -0.28
SMARCD1-201ENST00000381513 WNK1Q9H4A3 2382 aa13.33□□□□□ -0.28
SMARCD1-201ENST00000381513 Q6ZVQ6 151 aa13.32□□□□□ -0.28
SMARCD1-201ENST00000381513 CUBNO60494 3623 aa13.32□□□□□ -0.28
SMARCD1-201ENST00000381513 NDUFC1O43677 76 aa13.31□□□□□ -0.28
SMARCD1-201ENST00000381513 BCE1O60756 84 aa13.3□□□□□ -0.28
SMARCD1-201ENST00000381513 FAM229BQ4G0N7 80 aa13.3□□□□□ -0.28
SMARCD1-201ENST00000381513 C19orf84I3L1E1 186 aa13.3□□□□□ -0.28
SMARCD1-201ENST00000381513 BSNQ9UPA5 3926 aa13.3□□□□□ -0.28
SMARCD1-201ENST00000381513 A6NDX4 124 aa13.3□□□□□ -0.28
SMARCD1-201ENST00000381513 A0A1W2PPR1 153 aa13.29□□□□□ -0.28
SMARCD1-201ENST00000381513 C6orf99Q4VX62 202 aa13.29□□□□□ -0.28
SMARCD1-201ENST00000381513 ATRXP46100 2492 aa13.29□□□□□ -0.28
SMARCD1-201ENST00000381513 INSP01308 110 aa13.28□□□□□ -0.28
SMARCD1-201ENST00000381513 Q6ZQT0 140 aa13.28□□□□□ -0.28
SMARCD1-201ENST00000381513 TRBV10-1A0A0K0K1A3 114 aa13.28□□□□□ -0.28
SMARCD1-201ENST00000381513 A0A096LNT2 108 aa13.27□□□□□ -0.28
SMARCD1-201ENST00000381513 LY6G6DO95868 133 aa13.27□□□□□ -0.29
SMARCD1-201ENST00000381513 ATP5EP56381 51 aaPredicted RBP13.26□□□□□ -0.29
SMARCD1-201ENST00000381513 ZNF843Q8N446 348 aa13.26□□□□□ -0.29
SMARCD1-201ENST00000381513 MUC6Q6W4X9 2439 aa13.26□□□□□ -0.29
SMARCD1-201ENST00000381513 IGLV4-60A0A075B6I1 120 aa13.26□□□□□ -0.29
SMARCD1-201ENST00000381513 TMEM89A2RUT3 159 aa13.26□□□□□ -0.29
SMARCD1-201ENST00000381513 TMEM254Q8TBM7 123 aa13.25□□□□□ -0.29
SMARCD1-201ENST00000381513 LINC00167Q96N53 147 aa13.25□□□□□ -0.29
SMARCD1-201ENST00000381513 A8MTW9 85 aa13.25□□□□□ -0.29
SMARCD1-201ENST00000381513 NREPQ16612 68 aa13.25□□□□□ -0.29
SMARCD1-201ENST00000381513 IGHV3OR16-9A0A0B4J2B5 98 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms