RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 COX6A2Q02221 97 aa12.38□□□□□ -0.43
SNAPC3-202ENST00000380821 WFDC10AQ9H1F0 79 aa12.38□□□□□ -0.43
SNAPC3-202ENST00000380821 LINC00474Q9P2X8 69 aa12.38□□□□□ -0.43
SNAPC3-202ENST00000380821 C10orf25Q5T742 122 aa12.37□□□□□ -0.43
SNAPC3-202ENST00000380821 PLAC8L1A1L4L8 177 aa12.37□□□□□ -0.43
SNAPC3-202ENST00000380821 ACACAQ13085 2346 aa12.37□□□□□ -0.43
SNAPC3-202ENST00000380821 EP300Q09472 2414 aaPredicted RBP12.37□□□□□ -0.43
SNAPC3-202ENST00000380821 EGFEM1PQ0D2K5 195 aa12.37□□□□□ -0.43
SNAPC3-202ENST00000380821 KIAA1549Q9HCM3 1950 aa12.36□□□□□ -0.43
SNAPC3-202ENST00000380821 A0A087WVE0 104 aa12.36□□□□□ -0.43
SNAPC3-202ENST00000380821 PRM2P04554 102 aa12.36□□□□□ -0.43
SNAPC3-202ENST00000380821 IGLV2-18A0A075B6J9 118 aa12.36□□□□□ -0.43
SNAPC3-202ENST00000380821 A0A096LNJ9 63 aa12.36□□□□□ -0.43
SNAPC3-202ENST00000380821 NANOS2P60321 138 aaKnown RBP12.36□□□□□ -0.43
SNAPC3-202ENST00000380821 ADAMTSL4-AS1Q5T5F5 129 aa12.35□□□□□ -0.43
SNAPC3-202ENST00000380821 CELA1Q9UNI1 258 aa12.35□□□□□ -0.43
SNAPC3-202ENST00000380821 SPINK6Q6UWN8 80 aa12.35□□□□□ -0.43
SNAPC3-202ENST00000380821 NCOA6Q14686 2063 aaPredicted RBP12.35□□□□□ -0.43
SNAPC3-202ENST00000380821 CNOT1A5YKK6 2376 aaKnown RBP12.35□□□□□ -0.43
SNAPC3-202ENST00000380821 LINC01006Q8NI28 216 aa12.34□□□□□ -0.43
SNAPC3-202ENST00000380821 TRBV10-3A0A0K0K1G6 114 aa12.33□□□□□ -0.44
SNAPC3-202ENST00000380821 C1orf137Q5JT78 98 aa12.33□□□□□ -0.44
SNAPC3-202ENST00000380821 INAFM1C9JVW0 142 aa12.32□□□□□ -0.44
SNAPC3-202ENST00000380821 ZGRF1Q86YA3 2104 aa12.32□□□□□ -0.44
SNAPC3-202ENST00000380821 IGLV9-49A0A0B4J1Y8 123 aa12.32□□□□□ -0.44
SNAPC3-202ENST00000380821 BRI3O95415 125 aa12.31□□□□□ -0.44
SNAPC3-202ENST00000380821 UNQ6190/PRO20217Q6UXQ8 127 aa12.31□□□□□ -0.44
SNAPC3-202ENST00000380821 ZNF843Q8N446 348 aa12.31□□□□□ -0.44
SNAPC3-202ENST00000380821 F8WDY8 70 aa12.31□□□□□ -0.44
SNAPC3-202ENST00000380821 ABCA1O95477 2261 aa12.3□□□□□ -0.44
SNAPC3-202ENST00000380821 TRBV7-6A0A0J9YX20 115 aa12.3□□□□□ -0.44
SNAPC3-202ENST00000380821 REG3GQ6UW15 175 aa12.3□□□□□ -0.44
SNAPC3-202ENST00000380821 GVINP1Q7Z2Y8 2422 aa12.29□□□□□ -0.44
SNAPC3-202ENST00000380821 LINC01546A6NGU7 62 aa12.29□□□□□ -0.44
SNAPC3-202ENST00000380821 LINC00208Q96KT6 92 aa12.29□□□□□ -0.44
SNAPC3-202ENST00000380821 Q8N3U1 123 aa12.29□□□□□ -0.44
SNAPC3-202ENST00000380821 LINC01561Q8N1V8 128 aa12.28□□□□□ -0.44
SNAPC3-202ENST00000380821 TRBV7-7A0A0K0K1E9 115 aa12.28□□□□□ -0.44
SNAPC3-202ENST00000380821 ESRGQ1W209 222 aa12.28□□□□□ -0.44
SNAPC3-202ENST00000380821 CACNA1BQ00975 2339 aa12.28□□□□□ -0.44
SNAPC3-202ENST00000380821 ABCA4P78363 2273 aa12.28□□□□□ -0.44
SNAPC3-202ENST00000380821 EDN2P20800 178 aa12.27□□□□□ -0.44
SNAPC3-202ENST00000380821 ODF3L2Q3SX64 289 aa12.27□□□□□ -0.45
SNAPC3-202ENST00000380821 MED12LQ86YW9 2145 aa12.27□□□□□ -0.45
SNAPC3-202ENST00000380821 C9orf116Q5BN46 136 aaPredicted RBP12.26□□□□□ -0.45
SNAPC3-202ENST00000380821 IGLV4-60A0A075B6I1 120 aa12.26□□□□□ -0.45
SNAPC3-202ENST00000380821 BEAN1Q3B7T3 259 aa12.26□□□□□ -0.45
SNAPC3-202ENST00000380821 ZNF580Q9UK33 172 aa12.25□□□□□ -0.45
SNAPC3-202ENST00000380821 FHL2Q14192 279 aa12.25□□□□□ -0.45
SNAPC3-202ENST00000380821 FREM1Q5H8C1 2179 aa12.25□□□□□ -0.45
SNAPC3-202ENST00000380821 C10orf142B7Z368 130 aa12.24□□□□□ -0.45
SNAPC3-202ENST00000380821 IGHV4-30-4P0DP06 118 aa12.24□□□□□ -0.45
SNAPC3-202ENST00000380821 CDIP1Q9H305 208 aa12.24□□□□□ -0.45
SNAPC3-202ENST00000380821 DSCAML1Q8TD84 2053 aa12.24□□□□□ -0.45
SNAPC3-202ENST00000380821 LY6G6DO95868 133 aa12.24□□□□□ -0.45
SNAPC3-202ENST00000380821 RPS28P62857 69 aaKnown RBP12.24□□□□□ -0.45
SNAPC3-202ENST00000380821 PCNX3Q9H6A9 2034 aa12.23□□□□□ -0.45
SNAPC3-202ENST00000380821 PRR3P79522 188 aaKnown RBP12.23□□□□□ -0.45
SNAPC3-202ENST00000380821 GPR179Q6PRD1 2367 aa12.23□□□□□ -0.45
SNAPC3-202ENST00000380821 LINC00575Q6W349 94 aa12.22□□□□□ -0.45
SNAPC3-202ENST00000380821 Q6ZVQ6 151 aa12.22□□□□□ -0.45
SNAPC3-202ENST00000380821 CXCL6P80162 114 aa12.21□□□□□ -0.45
SNAPC3-202ENST00000380821 TMEM254Q8TBM7 123 aa12.21□□□□□ -0.46
SNAPC3-202ENST00000380821 A0A1B0GUV1 79 aa12.2□□□□□ -0.46
SNAPC3-202ENST00000380821 LINC00846Q9NV44 126 aa12.2□□□□□ -0.46
SNAPC3-202ENST00000380821 DOPEY2Q9Y3R5 2298 aa12.2□□□□□ -0.46
SNAPC3-202ENST00000380821 LINC01547P58512 204 aaPredicted RBP12.2□□□□□ -0.46
SNAPC3-202ENST00000380821 SPTAN1Q13813 2472 aaKnown RBP12.19□□□□□ -0.46
SNAPC3-202ENST00000380821 HCFC1P51610 2035 aa12.19□□□□□ -0.46
SNAPC3-202ENST00000380821 C2orf48Q96LS8 159 aa12.19□□□□□ -0.46
SNAPC3-202ENST00000380821 IGLV1-51P01701 117 aa12.18□□□□□ -0.46
SNAPC3-202ENST00000380821 H0Y9P7 68 aa12.18□□□□□ -0.46
SNAPC3-202ENST00000380821 Q6ZSN1 163 aa12.18□□□□□ -0.46
SNAPC3-202ENST00000380821 SPTBN2O15020 2390 aa12.17□□□□□ -0.46
SNAPC3-202ENST00000380821 C6orf223Q8N319 242 aa12.17□□□□□ -0.46
SNAPC3-202ENST00000380821 HCG22E2RYF7 251 aa12.17□□□□□ -0.46
SNAPC3-202ENST00000380821 hDV103S1A0JD37 113 aa12.16□□□□□ -0.46
SNAPC3-202ENST00000380821 AVPP01185 164 aa12.16□□□□□ -0.46
SNAPC3-202ENST00000380821 Q9BRP9 147 aa12.16□□□□□ -0.46
SNAPC3-202ENST00000380821 LRP4O75096 1905 aa12.16□□□□□ -0.46
SNAPC3-202ENST00000380821 PCDH15Q96QU1 1955 aa12.16□□□□□ -0.46
SNAPC3-202ENST00000380821 IGHV6-1A0A0B4J1U7 121 aa12.16□□□□□ -0.46
SNAPC3-202ENST00000380821 PCNX2A6NKB5 2137 aa12.15□□□□□ -0.46
SNAPC3-202ENST00000380821 M0R2N4 97 aa12.14□□□□□ -0.47
SNAPC3-202ENST00000380821 EML5Q05BV3 1969 aa12.14□□□□□ -0.47
SNAPC3-202ENST00000380821 CEP192Q8TEP8 1941 aa12.13□□□□□ -0.47
SNAPC3-202ENST00000380821 CRYGAP11844 174 aa12.13□□□□□ -0.47
SNAPC3-202ENST00000380821 LINC00337Q8N6G1 96 aa12.12□□□□□ -0.47
SNAPC3-202ENST00000380821 BCE1O60756 84 aa12.12□□□□□ -0.47
SNAPC3-202ENST00000380821 C16orf95Q9H693 158 aa12.12□□□□□ -0.47
SNAPC3-202ENST00000380821 KIF25-AS1Q9Y6Z4 181 aa12.11□□□□□ -0.47
SNAPC3-202ENST00000380821 IGLV5-39A0A0G2JS06 123 aa12.11□□□□□ -0.47
SNAPC3-202ENST00000380821 COL5A1P20908 1838 aaPredicted RBP12.11□□□□□ -0.47
SNAPC3-202ENST00000380821 CPAMD8Q8IZJ3 1885 aa12.11□□□□□ -0.47
SNAPC3-202ENST00000380821 PCNX1Q96RV3 2341 aa12.11□□□□□ -0.47
SNAPC3-202ENST00000380821 PCOTHQ58A44 107 aa12.11□□□□□ -0.47
SNAPC3-202ENST00000380821 PRO3102Q9H379 93 aa12.11□□□□□ -0.47
SNAPC3-202ENST00000380821 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.1□□□□□ -0.472e-7■■■□□ 18.1
SNAPC3-202ENST00000380821 CDSNQ15517 529 aa12.1□□□□□ -0.47
SNAPC3-202ENST00000380821 A0A087WSZ3 146 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms