RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 K7ERU9 68 aa15.17■□□□□ 0.02
RNF39-202ENST00000376751 PRSS2P07478 247 aa15.17■□□□□ 0.02
RNF39-202ENST00000376751 F8W1H4 67 aa15.16■□□□□ 0.02
RNF39-202ENST00000376751 NPC2P61916 151 aa15.16■□□□□ 0.02
RNF39-202ENST00000376751 CHCHD5Q9BSY4 110 aa15.16■□□□□ 0.02
RNF39-202ENST00000376751 TIMM17BO60830 172 aa15.16■□□□□ 0.02
RNF39-202ENST00000376751 Q9H8V8 135 aa15.16■□□□□ 0.02
RNF39-202ENST00000376751 DAND5Q8N907 189 aa15.15■□□□□ 0.02
RNF39-202ENST00000376751 WFDC9Q8NEX5 89 aa15.15■□□□□ 0.02
RNF39-202ENST00000376751 FLNBO75369 2602 aaKnown RBP15.15■□□□□ 0.02
RNF39-202ENST00000376751 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.15■□□□□ 0.02
RNF39-202ENST00000376751 PSMB2P49721 201 aa15.15■□□□□ 0.02
RNF39-202ENST00000376751 APOC4P55056 127 aa15.15■□□□□ 0.02
RNF39-202ENST00000376751 IGHV4-28A0A0C4DH34 117 aa15.14■□□□□ 0.01
RNF39-202ENST00000376751 ATP6V0E2Q8NHE4 81 aa15.14■□□□□ 0.01
RNF39-202ENST00000376751 IGKV3OR2-268A0A0C4DH90 116 aa15.13■□□□□ 0.01
RNF39-202ENST00000376751 TEX48A0A1B0GUV7 120 aa15.13■□□□□ 0.01
RNF39-202ENST00000376751 LYRM9A8MSI8 78 aa15.13■□□□□ 0.01
RNF39-202ENST00000376751 H7C2G1 150 aa15.13■□□□□ 0.01
RNF39-202ENST00000376751 TCL1BO95988 128 aa15.13■□□□□ 0.01
RNF39-202ENST00000376751 ZNF625Q96I27 306 aaPredicted RBP15.13■□□□□ 0.01
RNF39-202ENST00000376751 PRO0255Q9UI72 69 aa15.12■□□□□ 0.01
RNF39-202ENST00000376751 CBY1Q9Y3M2 126 aa15.12■□□□□ 0.01
RNF39-202ENST00000376751 G3V4G9 280 aa15.11■□□□□ 0.01
RNF39-202ENST00000376751 ERG28Q9UKR5 140 aa15.11■□□□□ 0.01
RNF39-202ENST00000376751 WIPF1O43516 503 aa15.11■□□□□ 0.01
RNF39-202ENST00000376751 LYRM7Q5U5X0 104 aa15.11■□□□□ 0.01
RNF39-202ENST00000376751 SH2D6Q7Z4S9 175 aa15.11■□□□□ 0.01
RNF39-202ENST00000376751 SMCPP49901 116 aaPredicted RBP15.1■□□□□ 0.01
RNF39-202ENST00000376751 Q8NAQ8 132 aa15.1■□□□□ 0.01
RNF39-202ENST00000376751 CELA1Q9UNI1 258 aa15.1■□□□□ 0.01
RNF39-202ENST00000376751 A0A096LPF7 62 aa15.09■□□□□ 0.01
RNF39-202ENST00000376751 ETDBQ3ZM63 59 aa15.09■□□□□ 0.01
RNF39-202ENST00000376751 VPS25Q9BRG1 176 aa15.09■□□□□ 0.01
RNF39-202ENST00000376751 PAX4O43316 350 aa15.07■□□□□ 0
RNF39-202ENST00000376751 IGHV4-30-4P0DP06 118 aa15.07■□□□□ 0
RNF39-202ENST00000376751 A0A0U1RRA0 63 aa15.07■□□□□ 0
RNF39-202ENST00000376751 SCGB1C2P0DMR2 95 aa15.07■□□□□ 0
RNF39-202ENST00000376751 IFITM1P13164 125 aa15.07■□□□□ 0
RNF39-202ENST00000376751 PRIMA1Q86XR5 153 aa15.07■□□□□ 0
RNF39-202ENST00000376751 Q1RN00 199 aa15.05■□□□□ 0
RNF39-202ENST00000376751 RNF183Q96D59 192 aa15.05■□□□□ 0
RNF39-202ENST00000376751 TRBV20-1A0A075B6N2 111 aa15.05■□□□□ -0
RNF39-202ENST00000376751 IGHV3OR16-9A0A0B4J2B5 98 aa15.05■□□□□ -0
RNF39-202ENST00000376751 DAD1P61803 113 aa15.05■□□□□ -0
RNF39-202ENST00000376751 CIRBPQ14011 172 aaKnown RBP15.05■□□□□ -0
RNF39-202ENST00000376751 LINC00308Q8TCZ7 52 aa15.05■□□□□ -0
RNF39-202ENST00000376751 MIFP14174 115 aa15.04■□□□□ -0
RNF39-202ENST00000376751 SOSTDC1Q6X4U4 206 aa15.04■□□□□ -0
RNF39-202ENST00000376751 LINC00959A0A1B0GUT2 108 aa15.03■□□□□ -0
RNF39-202ENST00000376751 TRIAP1O43715 76 aa15.03■□□□□ -0
RNF39-202ENST00000376751 COX7B2Q8TF08 81 aa15.03■□□□□ -0
RNF39-202ENST00000376751 TMEM262E9PQX1 116 aa15.02□□□□□ -0.01
RNF39-202ENST00000376751 MEIG1Q5JSS6 88 aa15.02□□□□□ -0.01
RNF39-202ENST00000376751 HERV-K104P63124 156 aa15.01□□□□□ -0.01
RNF39-202ENST00000376751 KRTAP24-1Q3LI83 254 aa15□□□□□ -0.01
RNF39-202ENST00000376751 CMYA5Q8N3K9 4069 aa15□□□□□ -0.01
RNF39-202ENST00000376751 A0A087WZ39 114 aa15□□□□□ -0.01
RNF39-202ENST00000376751 TRBV30A0A0K0K1B3 111 aa15□□□□□ -0.01
RNF39-202ENST00000376751 A0A1B0GUV1 79 aa15□□□□□ -0.01
RNF39-202ENST00000376751 OXLD1Q5BKU9 147 aa15□□□□□ -0.01
RNF39-202ENST00000376751 C5orf38Q86SI9 138 aa15□□□□□ -0.01
RNF39-202ENST00000376751 TOMM7Q9P0U1 55 aa15□□□□□ -0.01
RNF39-202ENST00000376751 ICOSQ9Y6W8 199 aa15□□□□□ -0.01
RNF39-202ENST00000376751 RPL13AP40429 203 aaKnown RBP14.99□□□□□ -0.01
RNF39-202ENST00000376751 TRAV26-1A0A087WT03 109 aa14.98□□□□□ -0.01
RNF39-202ENST00000376751 ATP5G1P05496 136 aa14.98□□□□□ -0.01
RNF39-202ENST00000376751 CLPSL2Q6UWE3 100 aa14.98□□□□□ -0.01
RNF39-202ENST00000376751 STAB1Q9NY15 2570 aa14.98□□□□□ -0.01
RNF39-202ENST00000376751 KRTAP10-11P60412 298 aa14.98□□□□□ -0.01
RNF39-202ENST00000376751 Q8N3U1 123 aa14.97□□□□□ -0.01
RNF39-202ENST00000376751 SPART-AS1P0CW21 52 aa14.96□□□□□ -0.01
RNF39-202ENST00000376751 FBN1P35555 2871 aaKnown RBP14.96□□□□□ -0.01
RNF39-202ENST00000376751 HTN3P15516 51 aa14.95□□□□□ -0.02
RNF39-202ENST00000376751 XCL1P47992 114 aa14.95□□□□□ -0.02
RNF39-202ENST00000376751 PKD1L1Q8TDX9 2849 aa14.94□□□□□ -0.02
RNF39-202ENST00000376751 C9JAW5 83 aa14.93□□□□□ -0.02
RNF39-202ENST00000376751 RETNQ9HD89 108 aa14.93□□□□□ -0.02
RNF39-202ENST00000376751 SS18Q15532 418 aa14.92□□□□□ -0.02
RNF39-202ENST00000376751 ATXN8Q156A1 80 aa14.92□□□□□ -0.02
RNF39-202ENST00000376751 SHISA2Q6UWI4 295 aa14.92□□□□□ -0.02
RNF39-202ENST00000376751 LINC00269Q8N2A0 174 aa14.91□□□□□ -0.02
RNF39-202ENST00000376751 COPS9Q8WXC6 57 aa14.91□□□□□ -0.02
RNF39-202ENST00000376751 SLC25A20O43772 301 aa14.9□□□□□ -0.02
RNF39-202ENST00000376751 LINC01620Q4KN68 170 aa14.9□□□□□ -0.02
RNF39-202ENST00000376751 MIR7-3HGQ8N6C7 128 aa14.9□□□□□ -0.02
RNF39-202ENST00000376751 FOXI1Q12951 378 aa14.89□□□□□ -0.03
RNF39-202ENST00000376751 TEN1Q86WV5 123 aa14.89□□□□□ -0.03
RNF39-202ENST00000376751 CLEC2BQ92478 149 aa14.89□□□□□ -0.03
RNF39-202ENST00000376751 CARD19Q96LW7 228 aa14.89□□□□□ -0.03
RNF39-202ENST00000376751 ANKRD29Q8N6D5 301 aa14.89□□□□□ -0.03
RNF39-202ENST00000376751 C11orf68Q9H3H3 251 aaKnown RBP14.89□□□□□ -0.03
RNF39-202ENST00000376751 PPDPFQ9H3Y8 114 aa14.88□□□□□ -0.03
RNF39-202ENST00000376751 J3QR89 54 aa14.87□□□□□ -0.03
RNF39-202ENST00000376751 PCP4P48539 62 aa14.87□□□□□ -0.03
RNF39-202ENST00000376751 MRPL23Q16540 153 aaKnown RBP14.87□□□□□ -0.03
RNF39-202ENST00000376751 MAST4O15021 2626 aa14.87□□□□□ -0.03
RNF39-202ENST00000376751 DNAH3Q8TD57 4116 aa14.87□□□□□ -0.03
RNF39-202ENST00000376751 ANGP03950 147 aaKnown RBP14.86□□□□□ -0.03
RNF39-202ENST00000376751 EGFEM1PQ0D2K5 195 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms