RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 TTTY13Q9BZ97 58 aa14.53□□□□□ -0.08
HLA-C-201ENST00000376228 MYMXA0A1B0GTQ4 84 aa14.52□□□□□ -0.08
HLA-C-201ENST00000376228 LINC00476Q8WZB0 136 aa14.52□□□□□ -0.08
HLA-C-201ENST00000376228 PLEKHB2Q96CS7 222 aa14.52□□□□□ -0.08
HLA-C-201ENST00000376228 DEFB131BA0A096LNP1 70 aa14.51□□□□□ -0.09
HLA-C-201ENST00000376228 EREGO14944 169 aa14.51□□□□□ -0.09
HLA-C-201ENST00000376228 LY6G6CO95867 125 aa14.51□□□□□ -0.09
HLA-C-201ENST00000376228 RBX1P62877 108 aa14.51□□□□□ -0.09
HLA-C-201ENST00000376228 IGLL5B9A064 214 aa14.51□□□□□ -0.09
HLA-C-201ENST00000376228 H3BRM9 83 aa14.51□□□□□ -0.09
HLA-C-201ENST00000376228 TRAV10A0A0B4J240 114 aa14.5□□□□□ -0.09
HLA-C-201ENST00000376228 J3QQQ9 107 aa14.5□□□□□ -0.09
HLA-C-201ENST00000376228 LYPD5Q6UWN5 251 aa14.5□□□□□ -0.09
HLA-C-201ENST00000376228 LINC00469Q8N7U9 141 aa14.5□□□□□ -0.09
HLA-C-201ENST00000376228 TRAV13-1A0A0B4J241 112 aa14.49□□□□□ -0.09
HLA-C-201ENST00000376228 IGHV1-58A0A0C4DH39 117 aa14.49□□□□□ -0.09
HLA-C-201ENST00000376228 TMEM262E9PQX1 116 aa14.49□□□□□ -0.09
HLA-C-201ENST00000376228 COX6A2Q02221 97 aa14.49□□□□□ -0.09
HLA-C-201ENST00000376228 MPV17L2Q567V2 206 aa14.49□□□□□ -0.09
HLA-C-201ENST00000376228 CDKN2A-AS1Q9UH64 79 aa14.49□□□□□ -0.09
HLA-C-201ENST00000376228 CCL25O15444 150 aa14.48□□□□□ -0.09
HLA-C-201ENST00000376228 ZNF815PA8K554 130 aa14.47□□□□□ -0.09
HLA-C-201ENST00000376228 TSPEAR-AS2P59090 65 aa14.47□□□□□ -0.09
HLA-C-201ENST00000376228 HSD52Q0P140 79 aa14.47□□□□□ -0.09
HLA-C-201ENST00000376228 IGHV3-30-3P0DP02 117 aa14.46□□□□□ -0.09
HLA-C-201ENST00000376228 LGALS3P17931 250 aaKnown RBP14.46□□□□□ -0.09
HLA-C-201ENST00000376228 HINT1P49773 126 aaPredicted RBP14.46□□□□□ -0.1
HLA-C-201ENST00000376228 TAL2Q16559 108 aa14.46□□□□□ -0.1
HLA-C-201ENST00000376228 IGLV5-39A0A0G2JS06 123 aa14.45□□□□□ -0.1
HLA-C-201ENST00000376228 BVES-AS1Q5T3Y7 98 aa14.45□□□□□ -0.1
HLA-C-201ENST00000376228 LINC00959A0A1B0GUT2 108 aa14.44□□□□□ -0.1
HLA-C-201ENST00000376228 APLNQ9ULZ1 77 aa14.44□□□□□ -0.1
HLA-C-201ENST00000376228 TRAV8-3A0A0A6YYJ7 113 aa14.43□□□□□ -0.1
HLA-C-201ENST00000376228 C15orf53Q8NAA6 179 aa14.43□□□□□ -0.1
HLA-C-201ENST00000376228 KMT2AQ03164 3969 aa14.43□□□□□ -0.1
HLA-C-201ENST00000376228 SPINK8P0C7L1 97 aa14.42□□□□□ -0.1
HLA-C-201ENST00000376228 IGHV3OR16-9A0A0B4J2B5 98 aa14.41□□□□□ -0.1
HLA-C-201ENST00000376228 SMIM1B2RUZ4 78 aa14.41□□□□□ -0.1
HLA-C-201ENST00000376228 SS18Q15532 418 aa14.41□□□□□ -0.1
HLA-C-201ENST00000376228 COL5A1-AS1Q5SY13 56 aa14.41□□□□□ -0.1
HLA-C-201ENST00000376228 IGHV3-64A0A075B6Q5 118 aa14.4□□□□□ -0.1
HLA-C-201ENST00000376228 BATFQ16520 125 aa14.4□□□□□ -0.1
HLA-C-201ENST00000376228 SCGB1D4Q6XE38 83 aa14.39□□□□□ -0.11
HLA-C-201ENST00000376228 ESRGQ1W209 222 aa14.38□□□□□ -0.11
HLA-C-201ENST00000376228 LINC01561Q8N1V8 128 aa14.38□□□□□ -0.11
HLA-C-201ENST00000376228 ORAOV1Q8WV07 137 aa14.38□□□□□ -0.11
HLA-C-201ENST00000376228 TM2D2Q9BX73 214 aa14.38□□□□□ -0.11
HLA-C-201ENST00000376228 SPANXB1Q9NS25 103 aaPredicted RBP14.38□□□□□ -0.11
HLA-C-201ENST00000376228 VPS13DQ5THJ4 4388 aa14.38□□□□□ -0.11
HLA-C-201ENST00000376228 A0A087WZ39 114 aa14.37□□□□□ -0.11
HLA-C-201ENST00000376228 ANGP03950 147 aaKnown RBP14.37□□□□□ -0.11
HLA-C-201ENST00000376228 LINC00269Q8N2A0 174 aa14.37□□□□□ -0.11
HLA-C-201ENST00000376228 PRR34Q9NV39 138 aa14.37□□□□□ -0.11
HLA-C-201ENST00000376228 IGKV3OR2-268A0A0C4DH90 116 aa14.36□□□□□ -0.11
HLA-C-201ENST00000376228 REG3AQ06141 175 aa14.36□□□□□ -0.11
HLA-C-201ENST00000376228 NDUFA12Q9UI09 145 aa14.36□□□□□ -0.11
HLA-C-201ENST00000376228 CEND1Q8N111 149 aa14.35□□□□□ -0.11
HLA-C-201ENST00000376228 C10orf126Q8N4M7 172 aa14.35□□□□□ -0.11
HLA-C-201ENST00000376228 EPPK1P58107 5090 aaKnown RBP14.34□□□□□ -0.11
HLA-C-201ENST00000376228 NDUFA1O15239 70 aa14.34□□□□□ -0.11
HLA-C-201ENST00000376228 Q8N3U1 123 aa14.34□□□□□ -0.11
HLA-C-201ENST00000376228 HIST1H4GQ99525 98 aa14.33□□□□□ -0.12
HLA-C-201ENST00000376228 A0A0J9YXY3 114 aa14.32□□□□□ -0.12
HLA-C-201ENST00000376228 CD164L2Q6UWJ8 174 aa14.32□□□□□ -0.12
HLA-C-201ENST00000376228 WFDC10BQ8IUB3 73 aa14.31□□□□□ -0.12
HLA-C-201ENST00000376228 A6NDN8 102 aa14.31□□□□□ -0.12
HLA-C-201ENST00000376228 GCSHP23434 173 aa14.31□□□□□ -0.12
HLA-C-201ENST00000376228 TIMM17BO60830 172 aa14.3□□□□□ -0.12
HLA-C-201ENST00000376228 LINC01556Q5JQF7 62 aa14.3□□□□□ -0.12
HLA-C-201ENST00000376228 CLPSL2Q6UWE3 100 aa14.3□□□□□ -0.12
HLA-C-201ENST00000376228 CHCHD10Q8WYQ3 142 aaPredicted RBP14.3□□□□□ -0.12
HLA-C-201ENST00000376228 TMEM238C9JI98 176 aa14.29□□□□□ -0.12
HLA-C-201ENST00000376228 XCL1P47992 114 aa14.29□□□□□ -0.12
HLA-C-201ENST00000376228 FXYD2P54710 66 aa14.29□□□□□ -0.12
HLA-C-201ENST00000376228 SRSF9Q13242 221 aaKnown RBP eCLIP14.29□□□□□ -0.12
HLA-C-201ENST00000376228 KLK12Q9UKR0 248 aa14.29□□□□□ -0.12
HLA-C-201ENST00000376228 TRAV8-4A0A0B4J246 113 aa14.28□□□□□ -0.12
HLA-C-201ENST00000376228 ENHOQ6UWT2 76 aa14.28□□□□□ -0.12
HLA-C-201ENST00000376228 COX7B2Q8TF08 81 aa14.28□□□□□ -0.12
HLA-C-201ENST00000376228 ZNF625Q96I27 306 aaPredicted RBP14.28□□□□□ -0.12
HLA-C-201ENST00000376228 HERV-K104P63124 156 aa14.27□□□□□ -0.12
HLA-C-201ENST00000376228 Q6ZVH6 145 aa14.27□□□□□ -0.12
HLA-C-201ENST00000376228 C5orf38Q86SI9 138 aa14.27□□□□□ -0.12
HLA-C-201ENST00000376228 LITAFQ99732 161 aa14.26□□□□□ -0.13
HLA-C-201ENST00000376228 IGHV3-30P01768 117 aa14.25□□□□□ -0.13
HLA-C-201ENST00000376228 IGHV3-33P01772 117 aa14.25□□□□□ -0.13
HLA-C-201ENST00000376228 DNAH10OSP0CZ25 163 aa14.25□□□□□ -0.13
HLA-C-201ENST00000376228 IGHV3-30-5P0DP03 117 aa14.25□□□□□ -0.13
HLA-C-201ENST00000376228 SFTA2Q6UW10 78 aa14.25□□□□□ -0.13
HLA-C-201ENST00000376228 Q9H8V8 135 aa14.25□□□□□ -0.13
HLA-C-201ENST00000376228 FRAS1Q86XX4 4008 aa14.25□□□□□ -0.13
HLA-C-201ENST00000376228 DNAH6Q9C0G6 4158 aa14.25□□□□□ -0.13
HLA-C-201ENST00000376228 COX7A2LO14548 114 aa14.25□□□□□ -0.13
HLA-C-201ENST00000376228 MIAQ16674 131 aa14.25□□□□□ -0.13
HLA-C-201ENST00000376228 SPANXDQ9BXN6 97 aa14.25□□□□□ -0.13
HLA-C-201ENST00000376228 SPANXCQ9NY87 97 aa14.25□□□□□ -0.13
HLA-C-201ENST00000376228 A0A1B0GV90 55 aa14.24□□□□□ -0.13
HLA-C-201ENST00000376228 TAX1BP3O14907 124 aa14.24□□□□□ -0.13
HLA-C-201ENST00000376228 CRPP02741 224 aa14.24□□□□□ -0.13
HLA-C-201ENST00000376228 PTTG1IPP53801 180 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms