RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 UBR5O95071 2799 aaPredicted RBP10.33□□□□□ -0.76
MSH5-201ENST00000375703 ZNF469Q96JG9 3925 aaPredicted RBP10.32□□□□□ -0.76
MSH5-201ENST00000375703 AKAP9Q99996 3911 aa10.32□□□□□ -0.76
MSH5-201ENST00000375703 RPL35AP18077 110 aaKnown RBP10.32□□□□□ -0.76
MSH5-201ENST00000375703 WNK1Q9H4A3 2382 aa10.32□□□□□ -0.76
MSH5-201ENST00000375703 WFDC10AQ9H1F0 79 aa10.32□□□□□ -0.76
MSH5-201ENST00000375703 LOC100131303A0A0U1RQF7 123 aa10.31□□□□□ -0.76
MSH5-201ENST00000375703 PLAC8L1A1L4L8 177 aa10.31□□□□□ -0.76
MSH5-201ENST00000375703 COX7A2LO14548 114 aa10.31□□□□□ -0.76
MSH5-201ENST00000375703 C15orf53Q8NAA6 179 aa10.3□□□□□ -0.76
MSH5-201ENST00000375703 LINC01006Q8NI28 216 aa10.3□□□□□ -0.76
MSH5-201ENST00000375703 TRGV4A0A0C4DH28 118 aa10.29□□□□□ -0.76
MSH5-201ENST00000375703 TRBV6-4A0A1B0GX49 114 aa10.29□□□□□ -0.76
MSH5-201ENST00000375703 DEFB121Q5J5C9 76 aa10.29□□□□□ -0.76
MSH5-201ENST00000375703 TLN2Q9Y4G6 2542 aa10.29□□□□□ -0.76
MSH5-201ENST00000375703 EPG5Q9HCE0 2579 aa10.29□□□□□ -0.76
MSH5-201ENST00000375703 PLA2G2AP14555 144 aa10.28□□□□□ -0.76
MSH5-201ENST00000375703 USP24Q9UPU5 2620 aa10.28□□□□□ -0.76
MSH5-201ENST00000375703 OVOL2Q9BRP0 275 aa10.28□□□□□ -0.76
MSH5-201ENST00000375703 IGKV3OR2-268A0A0C4DH90 116 aa10.27□□□□□ -0.76
MSH5-201ENST00000375703 C19orf73Q9NVV2 129 aa10.27□□□□□ -0.76
MSH5-201ENST00000375703 SONP18583 2426 aaKnown RBP10.27□□□□□ -0.76
MSH5-201ENST00000375703 IGLV1-51P01701 117 aa10.27□□□□□ -0.77
MSH5-201ENST00000375703 CSNK1G2-AS1Q8NCQ2 148 aa10.27□□□□□ -0.77
MSH5-201ENST00000375703 TTC32Q5I0X7 151 aa10.26□□□□□ -0.77
MSH5-201ENST00000375703 COX7B2Q8TF08 81 aa10.26□□□□□ -0.77
MSH5-201ENST00000375703 TOMM7Q9P0U1 55 aa10.26□□□□□ -0.77
MSH5-201ENST00000375703 APCP25054 2843 aa10.26□□□□□ -0.77
MSH5-201ENST00000375703 Q6Q795 121 aa10.26□□□□□ -0.77
MSH5-201ENST00000375703 C16orf95Q9H693 158 aa10.26□□□□□ -0.77
MSH5-201ENST00000375703 FAM240AA0A1B0GVK7 77 aa10.25□□□□□ -0.77
MSH5-201ENST00000375703 CCDC179H3BU77 68 aa10.25□□□□□ -0.77
MSH5-201ENST00000375703 CUBNO60494 3623 aa10.25□□□□□ -0.77
MSH5-201ENST00000375703 NHLRC4P0CG21 123 aaPredicted RBP10.25□□□□□ -0.77
MSH5-201ENST00000375703 FHL2Q14192 279 aa10.25□□□□□ -0.77
MSH5-201ENST00000375703 PPDPFQ9H3Y8 114 aa10.25□□□□□ -0.77
MSH5-201ENST00000375703 NF1P21359 2839 aa10.25□□□□□ -0.77
MSH5-201ENST00000375703 IGLV4-60A0A075B6I1 120 aa10.24□□□□□ -0.77
MSH5-201ENST00000375703 TRBV6-8A0A0A6YYG3 113 aa10.24□□□□□ -0.77
MSH5-201ENST00000375703 NDUFV3P56181 108 aaKnown RBP10.24□□□□□ -0.77
MSH5-201ENST00000375703 MRPL23Q16540 153 aaKnown RBP10.24□□□□□ -0.77
MSH5-201ENST00000375703 NOTCH3Q9UM47 2321 aa10.24□□□□□ -0.77
MSH5-201ENST00000375703 RNASE1P07998 156 aaKnown RBP10.24□□□□□ -0.77
MSH5-201ENST00000375703 HIST2H2BCQ6DN03 193 aa10.24□□□□□ -0.77
MSH5-201ENST00000375703 MIR7-3HGQ8N6C7 128 aa10.24□□□□□ -0.77
MSH5-201ENST00000375703 CHCHD5Q9BSY4 110 aa10.24□□□□□ -0.77
MSH5-201ENST00000375703 TRACP01848 142 aa10.23□□□□□ -0.77
MSH5-201ENST00000375703 ITPR3Q14573 2671 aa10.23□□□□□ -0.77
MSH5-201ENST00000375703 TRAV13-2A0A0B4J235 113 aa10.23□□□□□ -0.77
MSH5-201ENST00000375703 PF4P02776 101 aa10.22□□□□□ -0.77
MSH5-201ENST00000375703 BAALC-AS2P0C853 105 aa10.22□□□□□ -0.77
MSH5-201ENST00000375703 C2CD3Q4AC94 2353 aa10.22□□□□□ -0.77
MSH5-201ENST00000375703 LINC00158P58513 81 aa10.22□□□□□ -0.77
MSH5-201ENST00000375703 IGHV3OR16-9A0A0B4J2B5 98 aa10.21□□□□□ -0.78
MSH5-201ENST00000375703 FAM218AQ96MZ4 157 aa10.21□□□□□ -0.78
MSH5-201ENST00000375703 SND1-IT1Q9HBX3 110 aa10.21□□□□□ -0.78
MSH5-201ENST00000375703 CRPP02741 224 aa10.2□□□□□ -0.78
MSH5-201ENST00000375703 RPL28P46779 137 aaKnown RBP10.2□□□□□ -0.78
MSH5-201ENST00000375703 KRTAP1-1Q07627 177 aa10.2□□□□□ -0.78
MSH5-201ENST00000375703 C5orf38Q86SI9 138 aa10.2□□□□□ -0.78
MSH5-201ENST00000375703 LINC00337Q8N6G1 96 aa10.2□□□□□ -0.78
MSH5-201ENST00000375703 IGKV2-28A0A075B6P5 120 aa10.19□□□□□ -0.78
MSH5-201ENST00000375703 IGKV2D-28P01615 120 aa10.19□□□□□ -0.78
MSH5-201ENST00000375703 ACYP1P07311 99 aa10.19□□□□□ -0.78
MSH5-201ENST00000375703 DEFB130BP0DP73 79 aa10.19□□□□□ -0.78
MSH5-201ENST00000375703 DEFB130AP0DP74 79 aa10.19□□□□□ -0.78
MSH5-201ENST00000375703 FAM222AQ5U5X8 452 aa10.19□□□□□ -0.78
MSH5-201ENST00000375703 NIPBLQ6KC79 2804 aaeCLIP10.18□□□□□ -0.78
MSH5-201ENST00000375703 A0A087WZ39 114 aa10.18□□□□□ -0.78
MSH5-201ENST00000375703 NBPF19A0A087WUL8 3843 aa10.18□□□□□ -0.78
MSH5-201ENST00000375703 C3orf56Q8N813 242 aa10.18□□□□□ -0.78
MSH5-201ENST00000375703 SETXQ7Z333 2677 aaKnown RBP10.18□□□□□ -0.78
MSH5-201ENST00000375703 CCDC168Q8NDH2 2452 aa10.17□□□□□ -0.78
MSH5-201ENST00000375703 JMJD1CQ15652 2540 aa10.17□□□□□ -0.78
MSH5-201ENST00000375703 IBA57-AS1B1ANH7 110 aa10.17□□□□□ -0.78
MSH5-201ENST00000375703 PFN2P35080 140 aa10.17□□□□□ -0.78
MSH5-201ENST00000375703 CCL18P55774 89 aa10.17□□□□□ -0.78
MSH5-201ENST00000375703 Q9HAA7 133 aa10.17□□□□□ -0.78
MSH5-201ENST00000375703 LINC00959A0A1B0GUT2 108 aa10.16□□□□□ -0.78
MSH5-201ENST00000375703 C22orf24Q9Y442 160 aa10.16□□□□□ -0.78
MSH5-201ENST00000375703 SETD2Q9BYW2 2564 aaPredicted RBP10.16□□□□□ -0.78
MSH5-201ENST00000375703 FLNAP21333 2647 aaKnown RBP10.15□□□□□ -0.78
MSH5-201ENST00000375703 KIR2DL5BQ8NHK3 375 aa10.15□□□□□ -0.78
MSH5-201ENST00000375703 SMIM11BQ8TCY0 68 aa10.15□□□□□ -0.78
MSH5-201ENST00000375703 C6orf226Q5I0X4 101 aa10.15□□□□□ -0.78
MSH5-201ENST00000375703 GYPEP15421 78 aa10.14□□□□□ -0.79
MSH5-201ENST00000375703 MALP21145 153 aa10.14□□□□□ -0.79
MSH5-201ENST00000375703 TRBV7-7A0A0K0K1E9 115 aa10.13□□□□□ -0.79
MSH5-201ENST00000375703 PAX4O43316 350 aa10.13□□□□□ -0.79
MSH5-201ENST00000375703 HILS1P60008 231 aa10.13□□□□□ -0.79
MSH5-201ENST00000375703 C11orf68Q9H3H3 251 aaKnown RBP10.13□□□□□ -0.79
MSH5-201ENST00000375703 DNAL4O96015 105 aa10.12□□□□□ -0.79
MSH5-201ENST00000375703 XCL1P47992 114 aa10.12□□□□□ -0.79
MSH5-201ENST00000375703 SS18Q15532 418 aa10.12□□□□□ -0.79
MSH5-201ENST00000375703 H0YGX0 51 aa10.12□□□□□ -0.79
MSH5-201ENST00000375703 INAFM2P0DMQ5 153 aa10.12□□□□□ -0.79
MSH5-201ENST00000375703 LINC00612Q8N6U2 182 aa10.12□□□□□ -0.79
MSH5-201ENST00000375703 A0A087WYN8 130 aa10.11□□□□□ -0.79
MSH5-201ENST00000375703 OR13C6PQ8NH95 151 aa10.11□□□□□ -0.79
MSH5-201ENST00000375703 SMCR5Q8TEV8 140 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms