RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 TRAV13-1A0A0B4J241 112 aa17.46■□□□□ 0.39
CTSA-203ENST00000372459 IGHV3-30P01768 117 aa17.46■□□□□ 0.39
CTSA-203ENST00000372459 IGHV3-30-5P0DP03 117 aa17.46■□□□□ 0.39
CTSA-203ENST00000372459 WFDC2Q14508 124 aa17.46■□□□□ 0.39
CTSA-203ENST00000372459 TRAV8-3A0A0A6YYJ7 113 aa17.45■□□□□ 0.38
CTSA-203ENST00000372459 CDKN2A-AS1Q9UH64 79 aa17.45■□□□□ 0.38
CTSA-203ENST00000372459 VSIG2Q96IQ7 327 aa17.44■□□□□ 0.38
CTSA-203ENST00000372459 TSPAN13O95857 204 aa17.44■□□□□ 0.38
CTSA-203ENST00000372459 SPINK8P0C7L1 97 aa17.44■□□□□ 0.38
CTSA-203ENST00000372459 COX6A2Q02221 97 aa17.43■□□□□ 0.38
CTSA-203ENST00000372459 LYRM7Q5U5X0 104 aa17.43■□□□□ 0.38
CTSA-203ENST00000372459 F5H768 121 aa17.41■□□□□ 0.38
CTSA-203ENST00000372459 J3QR89 54 aa17.41■□□□□ 0.38
CTSA-203ENST00000372459 TRAV26-1A0A087WT03 109 aa17.4■□□□□ 0.38
CTSA-203ENST00000372459 RETNQ9HD89 108 aa17.4■□□□□ 0.38
CTSA-203ENST00000372459 MAST4O15021 2626 aa17.4■□□□□ 0.38
CTSA-203ENST00000372459 IGLV4-60A0A075B6I1 120 aa17.39■□□□□ 0.37
CTSA-203ENST00000372459 A0A096LPF7 62 aa17.39■□□□□ 0.37
CTSA-203ENST00000372459 APOMO95445 188 aa17.39■□□□□ 0.37
CTSA-203ENST00000372459 CFC1BP0CG36 223 aa17.37■□□□□ 0.37
CTSA-203ENST00000372459 CFC1P0CG37 223 aa17.37■□□□□ 0.37
CTSA-203ENST00000372459 HTN3P15516 51 aa17.37■□□□□ 0.37
CTSA-203ENST00000372459 ETDBQ3ZM63 59 aa17.37■□□□□ 0.37
CTSA-203ENST00000372459 C10orf126Q8N4M7 172 aa17.37■□□□□ 0.37
CTSA-203ENST00000372459 NDUFA12Q9UI09 145 aa17.37■□□□□ 0.37
CTSA-203ENST00000372459 ZFAND6Q6FIF0 208 aa17.35■□□□□ 0.37
CTSA-203ENST00000372459 A0A0J9YXY3 114 aa17.35■□□□□ 0.37
CTSA-203ENST00000372459 TMEM262E9PQX1 116 aa17.35■□□□□ 0.37
CTSA-203ENST00000372459 SH2D6Q7Z4S9 175 aa17.35■□□□□ 0.37
CTSA-203ENST00000372459 LOC107984156A0A0G2JMH3 177 aa17.34■□□□□ 0.37
CTSA-203ENST00000372459 A0A1B0GUV1 79 aa17.34■□□□□ 0.37
CTSA-203ENST00000372459 ARL17AQ8IVW1 177 aa17.34■□□□□ 0.37
CTSA-203ENST00000372459 IGLV5-39A0A0G2JS06 123 aa17.33■□□□□ 0.37
CTSA-203ENST00000372459 TMEM238C9JI98 176 aa17.33■□□□□ 0.37
CTSA-203ENST00000372459 MRPL23Q16540 153 aaKnown RBP17.33■□□□□ 0.37
CTSA-203ENST00000372459 PRO1854Q9UHT4 67 aa17.33■□□□□ 0.36
CTSA-203ENST00000372459 TRBV20-1A0A075B6N2 111 aa17.32■□□□□ 0.36
CTSA-203ENST00000372459 SMIM1B2RUZ4 78 aa17.32■□□□□ 0.36
CTSA-203ENST00000372459 MTURNQ8N3F0 131 aa17.32■□□□□ 0.36
CTSA-203ENST00000372459 PKD1L1Q8TDX9 2849 aa17.32■□□□□ 0.36
CTSA-203ENST00000372459 IGKV3OR2-268A0A0C4DH90 116 aa17.31■□□□□ 0.36
CTSA-203ENST00000372459 C11orf68Q9H3H3 251 aaKnown RBP17.31■□□□□ 0.36
CTSA-203ENST00000372459 ICOSQ9Y6W8 199 aa17.31■□□□□ 0.36
CTSA-203ENST00000372459 DNAH3Q8TD57 4116 aa17.31■□□□□ 0.36
CTSA-203ENST00000372459 PSMB2P49721 201 aa17.31■□□□□ 0.36
CTSA-203ENST00000372459 COL6A5A8TX70 2615 aa17.3■□□□□ 0.36
CTSA-203ENST00000372459 A0A0B4J2C4 111 aa17.3■□□□□ 0.36
CTSA-203ENST00000372459 ANK2Q01484 3957 aa17.29■□□□□ 0.36
CTSA-203ENST00000372459 A4D1N5 150 aa17.29■□□□□ 0.36
CTSA-203ENST00000372459 NDUFA1O15239 70 aa17.28■□□□□ 0.36
CTSA-203ENST00000372459 SMCPP49901 116 aaPredicted RBP17.28■□□□□ 0.36
CTSA-203ENST00000372459 SPATA25Q9BR10 227 aa17.28■□□□□ 0.36
CTSA-203ENST00000372459 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.26■□□□□ 0.35
CTSA-203ENST00000372459 SFTA2Q6UW10 78 aa17.26■□□□□ 0.35
CTSA-203ENST00000372459 LINC00959A0A1B0GUT2 108 aa17.26■□□□□ 0.35
CTSA-203ENST00000372459 TCL1BO95988 128 aa17.26■□□□□ 0.35
CTSA-203ENST00000372459 GAGE12HA6NDE8 117 aa17.25■□□□□ 0.35
CTSA-203ENST00000372459 MUSTN1Q8IVN3 82 aa17.25■□□□□ 0.35
CTSA-203ENST00000372459 LITAFQ99732 161 aa17.25■□□□□ 0.35
CTSA-203ENST00000372459 IGHV3-33P01772 117 aa17.24■□□□□ 0.35
CTSA-203ENST00000372459 EIF4EBP3O60516 100 aaPredicted RBP17.23■□□□□ 0.35
CTSA-203ENST00000372459 LELP1Q5T871 98 aa17.23■□□□□ 0.35
CTSA-203ENST00000372459 IGHV3OR16-9A0A0B4J2B5 98 aa17.22■□□□□ 0.35
CTSA-203ENST00000372459 TIMM17BO60830 172 aa17.22■□□□□ 0.35
CTSA-203ENST00000372459 FOXI1Q12951 378 aa17.22■□□□□ 0.35
CTSA-203ENST00000372459 SIGMAR1Q99720 223 aa17.22■□□□□ 0.35
CTSA-203ENST00000372459 SPANXDQ9BXN6 97 aa17.22■□□□□ 0.35
CTSA-203ENST00000372459 Q9H8V8 135 aa17.22■□□□□ 0.35
CTSA-203ENST00000372459 SPANXCQ9NY87 97 aa17.22■□□□□ 0.35
CTSA-203ENST00000372459 SS18Q15532 418 aa17.22■□□□□ 0.35
CTSA-203ENST00000372459 A0A0J9YWU9 116 aa17.21■□□□□ 0.35
CTSA-203ENST00000372459 H3BNG1 76 aa17.21■□□□□ 0.35
CTSA-203ENST00000372459 Q6ZTC4 211 aa17.21■□□□□ 0.35
CTSA-203ENST00000372459 SCGB1A1P11684 91 aa17.2■□□□□ 0.34
CTSA-203ENST00000372459 ERG28Q9UKR5 140 aa17.2■□□□□ 0.34
CTSA-203ENST00000372459 SCGB1C2P0DMR2 95 aa17.2■□□□□ 0.34
CTSA-203ENST00000372459 A0A087WZ39 114 aa17.19■□□□□ 0.34
CTSA-203ENST00000372459 PRB2P02812 416 aaPredicted RBP17.19■□□□□ 0.34
CTSA-203ENST00000372459 ADAMTSL4-AS1Q5T5F5 129 aa17.19■□□□□ 0.34
CTSA-203ENST00000372459 CIRBPQ14011 172 aaKnown RBP17.19■□□□□ 0.34
CTSA-203ENST00000372459 MIAQ16674 131 aa17.19■□□□□ 0.34
CTSA-203ENST00000372459 TEN1Q86WV5 123 aa17.18■□□□□ 0.34
CTSA-203ENST00000372459 ZNF625Q96I27 306 aaPredicted RBP17.18■□□□□ 0.34
CTSA-203ENST00000372459 PRSS2P07478 247 aa17.17■□□□□ 0.34
CTSA-203ENST00000372459 M0QXV9 152 aa17.17■□□□□ 0.34
CTSA-203ENST00000372459 ANGP03950 147 aaKnown RBP17.17■□□□□ 0.34
CTSA-203ENST00000372459 HERV-K104P63124 156 aa17.17■□□□□ 0.34
CTSA-203ENST00000372459 CLPSL2Q6UWE3 100 aa17.17■□□□□ 0.34
CTSA-203ENST00000372459 LINC00269Q8N2A0 174 aa17.17■□□□□ 0.34
CTSA-203ENST00000372459 COX7B2Q8TF08 81 aa17.17■□□□□ 0.34
CTSA-203ENST00000372459 C11orf45Q8TAV5 145 aa17.16■□□□□ 0.34
CTSA-203ENST00000372459 PPDPFLQ8WWR9 84 aa17.16■□□□□ 0.34
CTSA-203ENST00000372459 K7EIL1 84 aa17.15■□□□□ 0.34
CTSA-203ENST00000372459 KPRPQ5T749 579 aaPredicted RBP17.15■□□□□ 0.34
CTSA-203ENST00000372459 LYPD5Q6UWN5 251 aa17.15■□□□□ 0.34
CTSA-203ENST00000372459 C5orf38Q86SI9 138 aa17.15■□□□□ 0.34
CTSA-203ENST00000372459 XCL1P47992 114 aa17.15■□□□□ 0.34
CTSA-203ENST00000372459 IFITM1P13164 125 aa17.13■□□□□ 0.33
CTSA-203ENST00000372459 NANOS2P60321 138 aaKnown RBP17.13■□□□□ 0.33
CTSA-203ENST00000372459 REG3AQ06141 175 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 274.2 ms