RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 RPL18AQ02543 176 aaKnown RBP3.44□□□□□ -1.86
SGIP1-204ENST00000371039 BRD3OSQ6XYD6 125 aa3.44□□□□□ -1.86
SGIP1-204ENST00000371039 FP248Q71RG6 208 aaPredicted RBP3.44□□□□□ -1.86
SGIP1-204ENST00000371039 VSIG2Q96IQ7 327 aa3.44□□□□□ -1.86
SGIP1-204ENST00000371039 ICOSQ9Y6W8 199 aa3.44□□□□□ -1.86
SGIP1-204ENST00000371039 FLNBO75369 2602 aaKnown RBP3.43□□□□□ -1.86
SGIP1-204ENST00000371039 OTOGQ6ZRI0 2925 aa3.43□□□□□ -1.86
SGIP1-204ENST00000371039 C19orf84I3L1E1 186 aa3.43□□□□□ -1.86
SGIP1-204ENST00000371039 HIST1H4AP62805 103 aaKnown RBP3.43□□□□□ -1.86
SGIP1-204ENST00000371039 SS18Q15532 418 aa3.43□□□□□ -1.86
SGIP1-204ENST00000371039 RHPN1-AS1Q9BWJ2 59 aa3.43□□□□□ -1.86
SGIP1-204ENST00000371039 UBE2D4Q9Y2X8 147 aa3.43□□□□□ -1.86
SGIP1-204ENST00000371039 NBEAL2Q6ZNJ1 2754 aa3.43□□□□□ -1.86
SGIP1-204ENST00000371039 IGLV5-45A0A087WSX0 123 aa3.43□□□□□ -1.86
SGIP1-204ENST00000371039 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
SGIP1-204ENST00000371039 NDUFC2-KCTD14E9PQ53 114 aa3.43□□□□□ -1.86
SGIP1-204ENST00000371039 BPESC1Q9GZL8 116 aa3.43□□□□□ -1.86
SGIP1-204ENST00000371039 LAMTOR3Q9UHA4 124 aa3.43□□□□□ -1.86
SGIP1-204ENST00000371039 MIAQ16674 131 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 IGHV1OR15-1A0A075B7D0 117 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 IGHV1-58A0A0C4DH39 117 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 FAM223BA6NKX1 122 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 A8MTW9 85 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 HERVK_113P61574 105 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 SNRPD3P62318 126 aaKnown RBP3.42□□□□□ -1.86
SGIP1-204ENST00000371039 FAM223AQ8IWN6 122 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 LINC00467Q9BRT7 94 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 CREBBPQ92793 2442 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 IGHV3OR16-12A0A075B7B8 117 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 A6NDX4 124 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 ATOX1O00244 68 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 ZNF56Q15929 161 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 FAM74A4Q5TZK3 123 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 C11orf72Q8NBR9 251 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 UPK3BQ9BT76 320 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 CSPG4Q6UVK1 2322 aa3.42□□□□□ -1.86
SGIP1-204ENST00000371039 IGLV5-39A0A0G2JS06 123 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 RHOHQ15669 191 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 C5orf38Q86SI9 138 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 C11orf68Q9H3H3 251 aaKnown RBP3.41□□□□□ -1.86
SGIP1-204ENST00000371039 CDKN2A-AS1Q9UH64 79 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 POLQO75417 2590 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 TRBV7-6A0A0J9YX20 115 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 K7EQG2 157 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 TM2D3Q9BRN9 247 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 UBR5O95071 2799 aaPredicted RBP3.41□□□□□ -1.86
SGIP1-204ENST00000371039 IGKV2-28A0A075B6P5 120 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 IGHV3-73A0A0B4J1V6 119 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 IGKV2D-28P01615 120 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 S100A4P26447 101 aaKnown RBP3.41□□□□□ -1.86
SGIP1-204ENST00000371039 SPINK13Q1W4C9 94 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 C18orf65Q6ZTR6 163 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 ZNF625Q96I27 306 aaPredicted RBP3.41□□□□□ -1.86
SGIP1-204ENST00000371039 PKD1L1Q8TDX9 2849 aa3.41□□□□□ -1.86
SGIP1-204ENST00000371039 H3BMM0 161 aa3.4□□□□□ -1.86
SGIP1-204ENST00000371039 ATXN8Q156A1 80 aa3.4□□□□□ -1.86
SGIP1-204ENST00000371039 PAPPA-AS1Q5QFB9 102 aa3.4□□□□□ -1.86
SGIP1-204ENST00000371039 NTM-AS1Q6ZSK4 140 aa3.4□□□□□ -1.86
SGIP1-204ENST00000371039 UBE2WQ96B02 151 aa3.4□□□□□ -1.86
SGIP1-204ENST00000371039 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.4□□□□□ -1.86
SGIP1-204ENST00000371039 IGHV4-61A0A0C4DH41 118 aa3.4□□□□□ -1.86
SGIP1-204ENST00000371039 IGKV2-29A2NJV5 120 aaPredicted RBP3.4□□□□□ -1.86
SGIP1-204ENST00000371039 IGKV3-20P01619 116 aa3.4□□□□□ -1.86
SGIP1-204ENST00000371039 MOB4Q9Y3A3 225 aa3.4□□□□□ -1.86
SGIP1-204ENST00000371039 LGALS3P17931 250 aaKnown RBP3.4□□□□□ -1.87
SGIP1-204ENST00000371039 NOTCH3Q9UM47 2321 aa3.4□□□□□ -1.87
SGIP1-204ENST00000371039 CD28P10747 220 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 LINC00242Q5T6M2 205 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 FAM19A3Q7Z5A8 133 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 OBSCN-AS1Q96MR7 158 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 PDZD2O15018 2839 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 KTN1-AS1Q86SY8 53 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 C6orf223Q8N319 242 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 LINC01356Q8N9X3 169 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 NDUFA12Q9UI09 145 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 SMIM1B2RUZ4 78 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 C2orf82Q6UX34 121 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 LINC00308Q8TCZ7 52 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 TIMM21Q9BVV7 248 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 TENM4Q6N022 2769 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 JMJD1CQ15652 2540 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 LYRM9A8MSI8 78 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 NDUFA1O15239 70 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 PPP1R17O96001 155 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 LY6EQ16553 131 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 SERP2Q8N6R1 65 aa3.39□□□□□ -1.87
SGIP1-204ENST00000371039 HELZ2Q9BYK8 2649 aaKnown RBP3.38□□□□□ -1.87
SGIP1-204ENST00000371039 USP9YO00507 2555 aaPredicted RBP3.38□□□□□ -1.87
SGIP1-204ENST00000371039 PTPN13Q12923 2485 aa3.38□□□□□ -1.87
SGIP1-204ENST00000371039 A0A096LNT2 108 aa3.38□□□□□ -1.87
SGIP1-204ENST00000371039 IGHV3-38A0A0C4DH36 116 aa3.38□□□□□ -1.87
SGIP1-204ENST00000371039 INAFM2P0DMQ5 153 aa3.38□□□□□ -1.87
SGIP1-204ENST00000371039 LINC00337Q8N6G1 96 aa3.38□□□□□ -1.87
SGIP1-204ENST00000371039 SPG11Q96JI7 2443 aa3.38□□□□□ -1.87
SGIP1-204ENST00000371039 NOTCH2Q04721 2471 aa3.38□□□□□ -1.87
SGIP1-204ENST00000371039 DNAH10Q8IVF4 4471 aa3.38□□□□□ -1.87
SGIP1-204ENST00000371039 CXCL5P42830 114 aa3.38□□□□□ -1.87
SGIP1-204ENST00000371039 H3BUX3 64 aa3.38□□□□□ -1.87
SGIP1-204ENST00000371039 TIMM17BO60830 172 aa3.38□□□□□ -1.87
SGIP1-204ENST00000371039 COPS9Q8WXC6 57 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms