RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 USP9XQ93008 2570 aaPredicted RBP12.38□□□□□ -0.43
CHUK-201ENST00000370397 DEFB114Q30KQ6 69 aa12.38□□□□□ -0.43
CHUK-201ENST00000370397 ODF3L2Q3SX64 289 aa12.38□□□□□ -0.43
CHUK-201ENST00000370397 TRBV10-1A0A0K0K1A3 114 aa12.37□□□□□ -0.43
CHUK-201ENST00000370397 K7EQD1 137 aa12.37□□□□□ -0.43
CHUK-201ENST00000370397 NRGNQ92686 78 aa12.37□□□□□ -0.43
CHUK-201ENST00000370397 CYSTM1Q9H1C7 97 aa12.37□□□□□ -0.43
CHUK-201ENST00000370397 CREBBPQ92793 2442 aa12.36□□□□□ -0.43
CHUK-201ENST00000370397 ZFYVE26Q68DK2 2539 aa12.36□□□□□ -0.43
CHUK-201ENST00000370397 LINC01356Q8N9X3 169 aa12.36□□□□□ -0.43
CHUK-201ENST00000370397 TEX15Q9BXT5 2789 aa12.35□□□□□ -0.43
CHUK-201ENST00000370397 SS18Q15532 418 aa12.35□□□□□ -0.43
CHUK-201ENST00000370397 Q6ZTI0 123 aa12.35□□□□□ -0.43
CHUK-201ENST00000370397 DOPEY1Q5JWR5 2465 aa12.35□□□□□ -0.43
CHUK-201ENST00000370397 PLAC8L1A1L4L8 177 aa12.35□□□□□ -0.43
CHUK-201ENST00000370397 SMIM11BQ8TCY0 68 aa12.35□□□□□ -0.43
CHUK-201ENST00000370397 INAFM2P0DMQ5 153 aa12.34□□□□□ -0.43
CHUK-201ENST00000370397 XCL2Q9UBD3 114 aa12.34□□□□□ -0.43
CHUK-201ENST00000370397 TRAV13-2A0A0B4J235 113 aa12.34□□□□□ -0.43
CHUK-201ENST00000370397 CFAP161Q6P656 301 aa12.34□□□□□ -0.43
CHUK-201ENST00000370397 C4orf3Q8WVX3 66 aa12.34□□□□□ -0.43
CHUK-201ENST00000370397 CRYGAP11844 174 aa12.33□□□□□ -0.44
CHUK-201ENST00000370397 COX7CP15954 63 aa12.33□□□□□ -0.44
CHUK-201ENST00000370397 MIR7-3HGQ8N6C7 128 aa12.33□□□□□ -0.44
CHUK-201ENST00000370397 J3QLI3 93 aa12.32□□□□□ -0.44
CHUK-201ENST00000370397 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
CHUK-201ENST00000370397 KLK5Q9Y337 293 aaPredicted RBP12.32□□□□□ -0.44
CHUK-201ENST00000370397 GIG44P09565 113 aaPredicted RBP12.32□□□□□ -0.44
CHUK-201ENST00000370397 ANKRD17O75179 2603 aaKnown RBP12.32□□□□□ -0.44
CHUK-201ENST00000370397 TRGV1A0A0A0MS02 117 aa12.32□□□□□ -0.44
CHUK-201ENST00000370397 GAGE2AQ6NT46 116 aa12.32□□□□□ -0.44
CHUK-201ENST00000370397 ZNF462Q96JM2 2506 aa12.32□□□□□ -0.44
CHUK-201ENST00000370397 RPL36AP83881 106 aaKnown RBP12.31□□□□□ -0.44
CHUK-201ENST00000370397 RPL36ALQ969Q0 106 aaKnown RBP12.31□□□□□ -0.44
CHUK-201ENST00000370397 ANK3Q12955 4377 aaKnown RBP12.31□□□□□ -0.44
CHUK-201ENST00000370397 CCL18P55774 89 aa12.3□□□□□ -0.44
CHUK-201ENST00000370397 COX7B2Q8TF08 81 aa12.3□□□□□ -0.44
CHUK-201ENST00000370397 MAPK1IP1LQ8NDC0 245 aa12.3□□□□□ -0.44
CHUK-201ENST00000370397 SND1-IT1Q9HBX3 110 aa12.3□□□□□ -0.44
CHUK-201ENST00000370397 IGHV3OR16-9A0A0B4J2B5 98 aa12.3□□□□□ -0.44
CHUK-201ENST00000370397 USP9YO00507 2555 aaPredicted RBP12.3□□□□□ -0.44
CHUK-201ENST00000370397 PLA2G2AP14555 144 aa12.29□□□□□ -0.44
CHUK-201ENST00000370397 LINC00846Q9NV44 126 aa12.29□□□□□ -0.44
CHUK-201ENST00000370397 LRRC75A-AS1Q8N1F1 130 aa12.29□□□□□ -0.44
CHUK-201ENST00000370397 UPK3BQ9BT76 320 aa12.29□□□□□ -0.44
CHUK-201ENST00000370397 CRPP02741 224 aa12.29□□□□□ -0.44
CHUK-201ENST00000370397 NF1P21359 2839 aa12.29□□□□□ -0.44
CHUK-201ENST00000370397 LY6G6DO95868 133 aa12.28□□□□□ -0.44
CHUK-201ENST00000370397 DSCR9P59020 149 aa12.28□□□□□ -0.44
CHUK-201ENST00000370397 LOC100131303A0A0U1RQF7 123 aa12.28□□□□□ -0.44
CHUK-201ENST00000370397 C14orf132Q9NPU4 83 aa12.28□□□□□ -0.44
CHUK-201ENST00000370397 LOC107984640A0A0U1RRK4 108 aa12.27□□□□□ -0.45
CHUK-201ENST00000370397 IGLV4-60A0A075B6I1 120 aa12.26□□□□□ -0.45
CHUK-201ENST00000370397 LINC01561Q8N1V8 128 aa12.26□□□□□ -0.45
CHUK-201ENST00000370397 A0A1B0GX51 115 aa12.26□□□□□ -0.45
CHUK-201ENST00000370397 Q6JHZ5 121 aa12.26□□□□□ -0.45
CHUK-201ENST00000370397 TMEM243Q9BU79 118 aa12.26□□□□□ -0.45
CHUK-201ENST00000370397 CENPEQ02224 2701 aa12.26□□□□□ -0.45
CHUK-201ENST00000370397 LINC00167Q96N53 147 aa12.24□□□□□ -0.45
CHUK-201ENST00000370397 OVOL2Q9BRP0 275 aa12.24□□□□□ -0.45
CHUK-201ENST00000370397 FAM208BQ5VWN6 2430 aa12.24□□□□□ -0.45
CHUK-201ENST00000370397 RPL18AQ02543 176 aaKnown RBP12.24□□□□□ -0.45
CHUK-201ENST00000370397 ATOX1O00244 68 aa12.23□□□□□ -0.45
CHUK-201ENST00000370397 A0A087WZ39 114 aa12.23□□□□□ -0.45
CHUK-201ENST00000370397 IBA57-AS1B1ANH7 110 aa12.23□□□□□ -0.45
CHUK-201ENST00000370397 J3QKU1 62 aa12.23□□□□□ -0.45
CHUK-201ENST00000370397 IGHV4-31P0DP07 118 aa12.23□□□□□ -0.45
CHUK-201ENST00000370397 NOTCH3Q9UM47 2321 aa12.23□□□□□ -0.45
CHUK-201ENST00000370397 DYNLRB2Q8TF09 96 aa12.23□□□□□ -0.45
CHUK-201ENST00000370397 POLQO75417 2590 aa12.22□□□□□ -0.45
CHUK-201ENST00000370397 H0YGX0 51 aa12.22□□□□□ -0.45
CHUK-201ENST00000370397 NANOS2P60321 138 aaKnown RBP12.22□□□□□ -0.45
CHUK-201ENST00000370397 NOP10Q9NPE3 64 aaKnown RBP12.22□□□□□ -0.45
CHUK-201ENST00000370397 NCR3O14931 201 aa12.21□□□□□ -0.46
CHUK-201ENST00000370397 A0A087WVE0 104 aa12.2□□□□□ -0.46
CHUK-201ENST00000370397 STHQ8IWL8 128 aa12.2□□□□□ -0.46
CHUK-201ENST00000370397 MYO9AB2RTY4 2548 aa12.2□□□□□ -0.46
CHUK-201ENST00000370397 TRAV25A0A0B4J276 109 aa12.2□□□□□ -0.46
CHUK-201ENST00000370397 TRBV6-4A0A1B0GX49 114 aa12.2□□□□□ -0.46
CHUK-201ENST00000370397 LECT2O14960 151 aa12.2□□□□□ -0.46
CHUK-201ENST00000370397 CSNK1G2-AS1Q8NCQ2 148 aa12.2□□□□□ -0.46
CHUK-201ENST00000370397 hADV29S1A0JD25 119 aa12.19□□□□□ -0.46
CHUK-201ENST00000370397 DNAL4O96015 105 aa12.19□□□□□ -0.46
CHUK-201ENST00000370397 RPS28P62857 69 aaKnown RBP12.19□□□□□ -0.46
CHUK-201ENST00000370397 IGKV3D-7A0A0C4DH55 119 aa12.18□□□□□ -0.46
CHUK-201ENST00000370397 UBE2L6O14933 153 aa12.18□□□□□ -0.46
CHUK-201ENST00000370397 MYO18BQ8IUG5 2567 aa12.18□□□□□ -0.46
CHUK-201ENST00000370397 SLPIP03973 132 aa12.18□□□□□ -0.46
CHUK-201ENST00000370397 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
CHUK-201ENST00000370397 LINC00158P58513 81 aa12.17□□□□□ -0.46
CHUK-201ENST00000370397 C2CD3Q4AC94 2353 aa12.17□□□□□ -0.46
CHUK-201ENST00000370397 OXTP01178 125 aa12.17□□□□□ -0.46
CHUK-201ENST00000370397 C19orf73Q9NVV2 129 aa12.17□□□□□ -0.46
CHUK-201ENST00000370397 TOMM7Q9P0U1 55 aa12.17□□□□□ -0.46
CHUK-201ENST00000370397 FHL2Q14192 279 aa12.16□□□□□ -0.46
CHUK-201ENST00000370397 LYPD5Q6UWN5 251 aa12.16□□□□□ -0.46
CHUK-201ENST00000370397 TENM4Q6N022 2769 aa12.16□□□□□ -0.46
CHUK-201ENST00000370397 J3KT08 172 aa12.15□□□□□ -0.46
CHUK-201ENST00000370397 FAM19A5Q7Z5A7 132 aaPredicted RBP12.15□□□□□ -0.46
CHUK-201ENST00000370397 SERP2Q8N6R1 65 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms