RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 ITPR3Q14573 2671 aa7.57□□□□□ -1.2
LYSMD1-201ENST00000368908 LOC107984640A0A0U1RRK4 108 aa7.56□□□□□ -1.2
LYSMD1-201ENST00000368908 TMEM258P61165 79 aa7.56□□□□□ -1.2
LYSMD1-201ENST00000368908 FAM19A5Q7Z5A7 132 aaPredicted RBP7.56□□□□□ -1.2
LYSMD1-201ENST00000368908 OR13C6PQ8NH95 151 aa7.56□□□□□ -1.2
LYSMD1-201ENST00000368908 KLK5Q9Y337 293 aaPredicted RBP7.56□□□□□ -1.2
LYSMD1-201ENST00000368908 OBSCN-AS1Q96MR7 158 aa7.56□□□□□ -1.2
LYSMD1-201ENST00000368908 Q9UF83 564 aa7.56□□□□□ -1.2
LYSMD1-201ENST00000368908 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.56□□□□□ -1.2
LYSMD1-201ENST00000368908 SONP18583 2426 aaKnown RBP7.55□□□□□ -1.2
LYSMD1-201ENST00000368908 FLNAP21333 2647 aaKnown RBP7.55□□□□□ -1.2
LYSMD1-201ENST00000368908 SETXQ7Z333 2677 aaKnown RBP7.55□□□□□ -1.2
LYSMD1-201ENST00000368908 KNCNA6PVL3 124 aa7.55□□□□□ -1.2
LYSMD1-201ENST00000368908 RS1O15537 224 aa7.55□□□□□ -1.2
LYSMD1-201ENST00000368908 DNAL4O96015 105 aa7.55□□□□□ -1.2
LYSMD1-201ENST00000368908 IGHV4-38-2P0DP08 117 aa7.55□□□□□ -1.2
LYSMD1-201ENST00000368908 WIPF1O43516 503 aa7.55□□□□□ -1.2
LYSMD1-201ENST00000368908 FLNBO75369 2602 aaKnown RBP7.54□□□□□ -1.2
LYSMD1-201ENST00000368908 F5H768 121 aa7.54□□□□□ -1.2
LYSMD1-201ENST00000368908 CRPP02741 224 aa7.54□□□□□ -1.2
LYSMD1-201ENST00000368908 SERP2Q8N6R1 65 aa7.54□□□□□ -1.2
LYSMD1-201ENST00000368908 IGHV3-38A0A0C4DH36 116 aa7.54□□□□□ -1.2
LYSMD1-201ENST00000368908 hADV29S1A0JD25 119 aa7.54□□□□□ -1.2
LYSMD1-201ENST00000368908 PIMREGQ9BSJ6 248 aa7.54□□□□□ -1.2
LYSMD1-201ENST00000368908 DSCR9P59020 149 aa7.53□□□□□ -1.2
LYSMD1-201ENST00000368908 C11orf72Q8NBR9 251 aa7.53□□□□□ -1.2
LYSMD1-201ENST00000368908 A0A0U1RRA0 63 aa7.53□□□□□ -1.2
LYSMD1-201ENST00000368908 H0YGX0 51 aa7.53□□□□□ -1.2
LYSMD1-201ENST00000368908 UPK3BQ9BT76 320 aa7.53□□□□□ -1.2
LYSMD1-201ENST00000368908 RBMY1BA6NDE4 496 aaKnown RBP7.52□□□□□ -1.21
LYSMD1-201ENST00000368908 RBMY1EA6NEQ0 496 aaKnown RBP7.52□□□□□ -1.21
LYSMD1-201ENST00000368908 RBMY1DP0C7P1 496 aaKnown RBP7.52□□□□□ -1.21
LYSMD1-201ENST00000368908 HTN1P15515 57 aa7.52□□□□□ -1.21
LYSMD1-201ENST00000368908 SYNJ2BPP57105 145 aa7.52□□□□□ -1.21
LYSMD1-201ENST00000368908 Q9HAA7 133 aa7.52□□□□□ -1.21
LYSMD1-201ENST00000368908 CREBBPQ92793 2442 aa7.51□□□□□ -1.21
LYSMD1-201ENST00000368908 OTOGQ6ZRI0 2925 aa7.51□□□□□ -1.21
LYSMD1-201ENST00000368908 MYO9AB2RTY4 2548 aa7.5□□□□□ -1.21
LYSMD1-201ENST00000368908 IGHV4-61A0A0C4DH41 118 aa7.5□□□□□ -1.21
LYSMD1-201ENST00000368908 KRTAP1-3Q8IUG1 177 aa7.5□□□□□ -1.21
LYSMD1-201ENST00000368908 LINC00337Q8N6G1 96 aa7.5□□□□□ -1.21
LYSMD1-201ENST00000368908 DPH3Q96FX2 82 aa7.5□□□□□ -1.21
LYSMD1-201ENST00000368908 TRAV13-1A0A0B4J241 112 aa7.5□□□□□ -1.21
LYSMD1-201ENST00000368908 CYSRT1A8MQ03 144 aa7.5□□□□□ -1.21
LYSMD1-201ENST00000368908 DEFB131AP59861 70 aa7.5□□□□□ -1.21
LYSMD1-201ENST00000368908 IGKV2-28A0A075B6P5 120 aa7.49□□□□□ -1.21
LYSMD1-201ENST00000368908 TRBV10-1A0A0K0K1A3 114 aa7.49□□□□□ -1.21
LYSMD1-201ENST00000368908 IGKV2D-28P01615 120 aa7.49□□□□□ -1.21
LYSMD1-201ENST00000368908 C14orf132Q9NPU4 83 aa7.49□□□□□ -1.21
LYSMD1-201ENST00000368908 CDC42SE2Q9NRR3 84 aa7.49□□□□□ -1.21
LYSMD1-201ENST00000368908 MTORP42345 2549 aa7.49□□□□□ -1.21
LYSMD1-201ENST00000368908 A0A087WYN8 130 aa7.49□□□□□ -1.21
LYSMD1-201ENST00000368908 SMIM11BQ8TCY0 68 aa7.49□□□□□ -1.21
LYSMD1-201ENST00000368908 CYSTM1Q9H1C7 97 aa7.49□□□□□ -1.21
LYSMD1-201ENST00000368908 SND1-IT1Q9HBX3 110 aa7.49□□□□□ -1.21
LYSMD1-201ENST00000368908 LINC00846Q9NV44 126 aa7.49□□□□□ -1.21
LYSMD1-201ENST00000368908 USP17L23D6RBM5 183 aa7.48□□□□□ -1.21
LYSMD1-201ENST00000368908 HOXD3P31249 432 aaPredicted RBP7.48□□□□□ -1.21
LYSMD1-201ENST00000368908 C10orf105Q8TEF2 133 aa7.48□□□□□ -1.21
LYSMD1-201ENST00000368908 SETD2Q9BYW2 2564 aaPredicted RBP7.48□□□□□ -1.21
LYSMD1-201ENST00000368908 IGKV3D-7A0A0C4DH55 119 aa7.47□□□□□ -1.21
LYSMD1-201ENST00000368908 INSP01308 110 aa7.47□□□□□ -1.21
LYSMD1-201ENST00000368908 RPL36AP83881 106 aaKnown RBP7.47□□□□□ -1.21
LYSMD1-201ENST00000368908 ATP5EP2Q5VTU8 51 aa7.47□□□□□ -1.21
LYSMD1-201ENST00000368908 LINC01561Q8N1V8 128 aa7.47□□□□□ -1.21
LYSMD1-201ENST00000368908 RPL36ALQ969Q0 106 aaKnown RBP7.47□□□□□ -1.21
LYSMD1-201ENST00000368908 NDUFC2-KCTD14E9PQ53 114 aa7.47□□□□□ -1.21
LYSMD1-201ENST00000368908 S100A7L2Q5SY68 101 aa7.47□□□□□ -1.21
LYSMD1-201ENST00000368908 C10orf99Q6UWK7 81 aa7.47□□□□□ -1.21
LYSMD1-201ENST00000368908 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
LYSMD1-201ENST00000368908 IL17DQ8TAD2 202 aa7.47□□□□□ -1.21
LYSMD1-201ENST00000368908 COX7B2Q8TF08 81 aa7.47□□□□□ -1.21
LYSMD1-201ENST00000368908 PRM2P04554 102 aa7.46□□□□□ -1.21
LYSMD1-201ENST00000368908 C9orf129Q5T035 196 aaKnown RBP7.46□□□□□ -1.21
LYSMD1-201ENST00000368908 Q96MF0 132 aa7.46□□□□□ -1.21
LYSMD1-201ENST00000368908 K7EQD1 137 aa7.46□□□□□ -1.22
LYSMD1-201ENST00000368908 MSMBP08118 114 aa7.46□□□□□ -1.22
LYSMD1-201ENST00000368908 NTM-AS1Q6ZSK4 140 aa7.46□□□□□ -1.22
LYSMD1-201ENST00000368908 UBE2E2Q96LR5 201 aa7.46□□□□□ -1.22
LYSMD1-201ENST00000368908 IBA57-AS1B1ANH7 110 aa7.44□□□□□ -1.22
LYSMD1-201ENST00000368908 CCKP06307 115 aa7.44□□□□□ -1.22
LYSMD1-201ENST00000368908 WFDC11Q8NEX6 87 aa7.44□□□□□ -1.22
LYSMD1-201ENST00000368908 KIR2DL5BQ8NHK3 375 aa7.44□□□□□ -1.22
LYSMD1-201ENST00000368908 MAP6D1Q9H9H5 199 aa7.44□□□□□ -1.22
LYSMD1-201ENST00000368908 IGHV4-30-2A0A087WSY4 118 aa7.44□□□□□ -1.22
LYSMD1-201ENST00000368908 A0A096LNT2 108 aa7.44□□□□□ -1.22
LYSMD1-201ENST00000368908 NDUFC2O95298 119 aa7.44□□□□□ -1.22
LYSMD1-201ENST00000368908 LY6G6DO95868 133 aa7.44□□□□□ -1.22
LYSMD1-201ENST00000368908 CCL18P55774 89 aa7.44□□□□□ -1.22
LYSMD1-201ENST00000368908 LINC00167Q96N53 147 aa7.44□□□□□ -1.22
LYSMD1-201ENST00000368908 ANK3Q12955 4377 aaKnown RBP7.43□□□□□ -1.22
LYSMD1-201ENST00000368908 A0A087WVE0 104 aa7.43□□□□□ -1.22
LYSMD1-201ENST00000368908 LECT2O14960 151 aa7.43□□□□□ -1.22
LYSMD1-201ENST00000368908 TMEM243Q9BU79 118 aa7.43□□□□□ -1.22
LYSMD1-201ENST00000368908 ORMDL1Q9P0S3 153 aa7.43□□□□□ -1.22
LYSMD1-201ENST00000368908 OXTP01178 125 aa7.43□□□□□ -1.22
LYSMD1-201ENST00000368908 IGHV4-59P01825 116 aa7.43□□□□□ -1.22
LYSMD1-201ENST00000368908 MAPK1IP1LQ8NDC0 245 aa7.43□□□□□ -1.22
LYSMD1-201ENST00000368908 NIPBLQ6KC79 2804 aaeCLIP7.42□□□□□ -1.22
LYSMD1-201ENST00000368908 LINC00158P58513 81 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms