RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 ARL2-SNX15V9GYD0 113 aa0□□□□□ -2.41
RNU6-28P-201ENST00000362378 TRBV6-1A0A0K0K1D8 114 aa-0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 C10orf142B7Z368 130 aa-0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 COX6CP09669 75 aa-0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 DEFB109BQ30KR1 87 aa-0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 PIGYQ3MUY2 71 aa-0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 SPRR2GQ9BYE4 73 aa-0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 MANBALQ9NQG1 85 aa-0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 ZFHX3Q15911 3703 aa-0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 PEG3Q9GZU2 1588 aa-0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 MRC2Q9UBG0 1479 aa-0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 GTF2H5Q6ZYL4 71 aa-0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 PRO1854Q9UHT4 67 aa-0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 BTAF1O14981 1849 aa-0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 CC2D2AQ9P2K1 1620 aa-0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 ARHGEF12Q9NZN5 1544 aa-0.03□□□□□ -2.41
RNU6-28P-201ENST00000362378 KMT2AQ03164 3969 aa-0.03□□□□□ -2.41
RNU6-28P-201ENST00000362378 WNK2Q9Y3S1 2297 aa-0.03□□□□□ -2.41
RNU6-28P-201ENST00000362378 SPRR1AP35321 89 aa-0.03□□□□□ -2.41
RNU6-28P-201ENST00000362378 MYCBP2O75592 4640 aa-0.03□□□□□ -2.41
RNU6-28P-201ENST00000362378 MAGI1Q96QZ7 1491 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-28P-201ENST00000362378 CACNA1AO00555 2505 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 AKAP6Q13023 2319 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 TOP2BQ02880 1626 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 C20orf202A1L168 122 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 TMEM262E9PQX1 116 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 HSD52Q0P140 79 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 C10orf113Q5VZT2 155 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 ZFYVE16Q7Z3T8 1539 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 TULP4Q9NRJ4 1543 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 ABCA2Q9BZC7 2435 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 HMCN2Q8NDA2 5059 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 ADGRL2O95490 1459 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 PLCE1Q9P212 2302 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 PTPRQQ9UMZ3 2332 aa-0.04□□□□□ -2.42
RNU6-28P-201ENST00000362378 SCN7AQ01118 1682 aa-0.05□□□□□ -2.42
RNU6-28P-201ENST00000362378 NCOR1O75376 2440 aa-0.05□□□□□ -2.42
RNU6-28P-201ENST00000362378 MYO7BQ6PIF6 2116 aa-0.05□□□□□ -2.42
RNU6-28P-201ENST00000362378 TRAPPC2P0DI81 140 aa-0.05□□□□□ -2.42
RNU6-28P-201ENST00000362378 TRAPPC2BP0DI82 140 aa-0.05□□□□□ -2.42
RNU6-28P-201ENST00000362378 DEFB123Q8N688 67 aa-0.05□□□□□ -2.42
RNU6-28P-201ENST00000362378 TOPAZ1Q8N9V7 1692 aa-0.05□□□□□ -2.42
RNU6-28P-201ENST00000362378 FXYD6-FXYD2A0A087WZ82 144 aa-0.06□□□□□ -2.42
RNU6-28P-201ENST00000362378 SNCAP37840 140 aa-0.06□□□□□ -2.42
RNU6-28P-201ENST00000362378 KRTDAPP60985 99 aa-0.06□□□□□ -2.42
RNU6-28P-201ENST00000362378 UBA52P62987 128 aaKnown RBP-0.06□□□□□ -2.42
RNU6-28P-201ENST00000362378 LPAP08519 4548 aa-0.06□□□□□ -2.42
RNU6-28P-201ENST00000362378 CHD1O14646 1710 aa-0.07□□□□□ -2.42
RNU6-28P-201ENST00000362378 NEBP20929 6669 aa-0.07□□□□□ -2.42
RNU6-28P-201ENST00000362378 POLA1P09884 1462 aaPredicted RBP-0.07□□□□□ -2.42
RNU6-28P-201ENST00000362378 CRYM-AS1A6NIL9 109 aa-0.07□□□□□ -2.42
RNU6-28P-201ENST00000362378 FAM223BA6NKX1 122 aa-0.07□□□□□ -2.42
RNU6-28P-201ENST00000362378 S100PP25815 95 aa-0.07□□□□□ -2.42
RNU6-28P-201ENST00000362378 SFTA2Q6UW10 78 aa-0.07□□□□□ -2.42
RNU6-28P-201ENST00000362378 C12orf57Q99622 126 aa-0.07□□□□□ -2.42
RNU6-28P-201ENST00000362378 PKDREJQ9NTG1 2253 aa-0.08□□□□□ -2.42
RNU6-28P-201ENST00000362378 SAA2P0DJI9 122 aaPredicted RBP-0.08□□□□□ -2.42
RNU6-28P-201ENST00000362378 CGREF1Q99674 301 aa-0.08□□□□□ -2.42
RNU6-28P-201ENST00000362378 USF3Q68DE3 2245 aa-0.08□□□□□ -2.42
RNU6-28P-201ENST00000362378 ABCC5O15440 1437 aa-0.08□□□□□ -2.42
RNU6-28P-201ENST00000362378 DOPEY2Q9Y3R5 2298 aa-0.08□□□□□ -2.42
RNU6-28P-201ENST00000362378 GAPVD1Q14C86 1478 aa-0.09□□□□□ -2.42
RNU6-28P-201ENST00000362378 TRBV7-4A0A0J9YYF1 115 aa-0.09□□□□□ -2.42
RNU6-28P-201ENST00000362378 hADV29S1A0JD25 119 aa-0.09□□□□□ -2.42
RNU6-28P-201ENST00000362378 COX6B1P14854 86 aa-0.09□□□□□ -2.42
RNU6-28P-201ENST00000362378 LINC01600Q96MT4 127 aa-0.09□□□□□ -2.42
RNU6-28P-201ENST00000362378 PRO1933Q9H354 126 aa-0.09□□□□□ -2.42
RNU6-28P-201ENST00000362378 VWFP04275 2813 aa-0.09□□□□□ -2.42
RNU6-28P-201ENST00000362378 TENM4Q6N022 2769 aa-0.09□□□□□ -2.42
RNU6-28P-201ENST00000362378 PIEZO2Q9H5I5 2752 aa-0.09□□□□□ -2.42
RNU6-28P-201ENST00000362378 C1orf167Q5SNV9 1468 aa-0.1□□□□□ -2.42
RNU6-28P-201ENST00000362378 PTPN13Q12923 2485 aa-0.1□□□□□ -2.43
RNU6-28P-201ENST00000362378 COL4A6Q14031 1691 aa-0.1□□□□□ -2.43
RNU6-28P-201ENST00000362378 A0A1B0GWA3 101 aa-0.1□□□□□ -2.43
RNU6-28P-201ENST00000362378 LINC00846Q9NV44 126 aa-0.1□□□□□ -2.43
RNU6-28P-201ENST00000362378 CHD6Q8TD26 2715 aa-0.1□□□□□ -2.43
RNU6-28P-201ENST00000362378 NUP188Q5SRE5 1749 aa-0.1□□□□□ -2.43
RNU6-28P-201ENST00000362378 ABCA3Q99758 1704 aa-0.1□□□□□ -2.43
RNU6-28P-201ENST00000362378 FLNCQ14315 2725 aa-0.11□□□□□ -2.43
RNU6-28P-201ENST00000362378 FAT2Q9NYQ8 4349 aa-0.11□□□□□ -2.43
RNU6-28P-201ENST00000362378 LINC00959A0A1B0GUT2 108 aa-0.11□□□□□ -2.43
RNU6-28P-201ENST00000362378 C14orf144Q96I85 54 aa-0.11□□□□□ -2.43
RNU6-28P-201ENST00000362378 SPRR1BP22528 89 aa-0.12□□□□□ -2.43
RNU6-28P-201ENST00000362378 SEC11AP67812 179 aa-0.12□□□□□ -2.43
RNU6-28P-201ENST00000362378 FDCSPQ8NFU4 85 aa-0.12□□□□□ -2.43
RNU6-28P-201ENST00000362378 TCEAL7Q9BRU2 100 aa-0.12□□□□□ -2.43
RNU6-28P-201ENST00000362378 TNXBP22105 4242 aa-0.12□□□□□ -2.43
RNU6-28P-201ENST00000362378 ALMS1Q8TCU4 4167 aa-0.13□□□□□ -2.43
RNU6-28P-201ENST00000362378 LCN9Q8WX39 176 aa-0.13□□□□□ -2.43
RNU6-28P-201ENST00000362378 PKD1L1Q8TDX9 2849 aa-0.14□□□□□ -2.43
RNU6-28P-201ENST00000362378 GOLGA4Q13439 2230 aaKnown RBP-0.14□□□□□ -2.43
RNU6-28P-201ENST00000362378 TMEM218A2RU14 115 aa-0.14□□□□□ -2.43
RNU6-28P-201ENST00000362378 PRM1P04553 51 aa-0.14□□□□□ -2.43
RNU6-28P-201ENST00000362378 SPRR2DP22532 72 aa-0.14□□□□□ -2.43
RNU6-28P-201ENST00000362378 XRN1Q8IZH2 1706 aaKnown RBP-0.14□□□□□ -2.43
RNU6-28P-201ENST00000362378 HSPG2P98160 4391 aa-0.15□□□□□ -2.43
RNU6-28P-201ENST00000362378 SETBP1Q9Y6X0 1596 aa-0.15□□□□□ -2.43
RNU6-28P-201ENST00000362378 TSC2P49815 1807 aa-0.15□□□□□ -2.43
RNU6-28P-201ENST00000362378 A0A0G2JMZ2 1700 aa-0.15□□□□□ -2.43
RNU6-28P-201ENST00000362378 KIAA0556O60303 1618 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms