RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PACRGQ96M98 296 aaPredicted RBP10.1□□□□□ -0.79
TPM1-206ENST00000358278 GEMIN7Q9H840 131 aaKnown RBP10.1□□□□□ -0.79
TPM1-206ENST00000358278 FAT2Q9NYQ8 4349 aa10.1□□□□□ -0.79
TPM1-206ENST00000358278 A0A0J9YXV3 536 aa10.09□□□□□ -0.79
TPM1-206ENST00000358278 COX7A2LO14548 114 aa10.09□□□□□ -0.79
TPM1-206ENST00000358278 S100A2P29034 98 aa10.09□□□□□ -0.79
TPM1-206ENST00000358278 MAP1LC3CQ9BXW4 147 aa10.09□□□□□ -0.79
TPM1-206ENST00000358278 TRAV12-1A0A0B4J245 112 aa10.08□□□□□ -0.8
TPM1-206ENST00000358278 EREGO14944 169 aa10.08□□□□□ -0.8
TPM1-206ENST00000358278 SNRPEP62304 92 aaKnown RBP10.08□□□□□ -0.8
TPM1-206ENST00000358278 HERVK_113P63121 156 aa10.08□□□□□ -0.8
TPM1-206ENST00000358278 FAM19A3Q7Z5A8 133 aa10.08□□□□□ -0.8
TPM1-206ENST00000358278 A0A087WTM6 91 aa10.07□□□□□ -0.8
TPM1-206ENST00000358278 IGHV3OR16-9A0A0B4J2B5 98 aa10.07□□□□□ -0.8
TPM1-206ENST00000358278 MALP21145 153 aa10.07□□□□□ -0.8
TPM1-206ENST00000358278 COX6A2Q02221 97 aa10.07□□□□□ -0.8
TPM1-206ENST00000358278 C5orf38Q86SI9 138 aa10.07□□□□□ -0.8
TPM1-206ENST00000358278 HIST3H2BBQ8N257 126 aa10.07□□□□□ -0.8
TPM1-206ENST00000358278 CHTOPQ9Y3Y2 248 aaKnown RBP10.07□□□□□ -0.8
TPM1-206ENST00000358278 TINCRA0A1B0GVN0 87 aa10.07□□□□□ -0.8
TPM1-206ENST00000358278 LRCOL1A6NCL2 159 aa10.07□□□□□ -0.8
TPM1-206ENST00000358278 USP17L23D6RBM5 183 aa10.07□□□□□ -0.8
TPM1-206ENST00000358278 CHAC1Q9BUX1 264 aa10.07□□□□□ -0.8
TPM1-206ENST00000358278 WFDC2Q14508 124 aa10.06□□□□□ -0.8
TPM1-206ENST00000358278 CFAP161Q6P656 301 aa10.06□□□□□ -0.8
TPM1-206ENST00000358278 IGLC3P0DOY3 106 aa10.05□□□□□ -0.8
TPM1-206ENST00000358278 LINC00469Q8N7U9 141 aa10.05□□□□□ -0.8
TPM1-206ENST00000358278 IGLV4-69A0A075B6H9 119 aa10.04□□□□□ -0.8
TPM1-206ENST00000358278 F8VRH5 84 aa10.04□□□□□ -0.8
TPM1-206ENST00000358278 APOMO95445 188 aa10.04□□□□□ -0.8
TPM1-206ENST00000358278 C14orf177Q52M58 125 aa10.04□□□□□ -0.8
TPM1-206ENST00000358278 MRPL35Q9NZE8 188 aaKnown RBP10.04□□□□□ -0.8
TPM1-206ENST00000358278 A0A087WZ39 114 aa10.04□□□□□ -0.8
TPM1-206ENST00000358278 IGHV1-58A0A0C4DH39 117 aa10.04□□□□□ -0.8
TPM1-206ENST00000358278 C5orf52A6NGY3 159 aa10.04□□□□□ -0.8
TPM1-206ENST00000358278 ODF1Q14990 250 aa10.04□□□□□ -0.8
TPM1-206ENST00000358278 C15orf56Q8N910 161 aa10.04□□□□□ -0.8
TPM1-206ENST00000358278 HIST1H2BLQ99880 126 aa10.04□□□□□ -0.8
TPM1-206ENST00000358278 CDKN2A-AS1Q9UH64 79 aa10.04□□□□□ -0.8
TPM1-206ENST00000358278 SYS1-DBNDD2H3BUS1 97 aa10.03□□□□□ -0.8
TPM1-206ENST00000358278 KRTDAPP60985 99 aa10.03□□□□□ -0.8
TPM1-206ENST00000358278 Q8N814 137 aa10.03□□□□□ -0.8
TPM1-206ENST00000358278 PKD1P98161 4303 aa10.03□□□□□ -0.8
TPM1-206ENST00000358278 hDV102S1A0JD36 115 aa10.02□□□□□ -0.8
TPM1-206ENST00000358278 C11orf86A6NJI1 115 aa10.02□□□□□ -0.8
TPM1-206ENST00000358278 C3orf79P0CE67 100 aa10.02□□□□□ -0.8
TPM1-206ENST00000358278 HIGD2BQ4VC39 106 aa10.02□□□□□ -0.8
TPM1-206ENST00000358278 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.02□□□□□ -0.81
TPM1-206ENST00000358278 IGLV5-45A0A087WSX0 123 aa10.02□□□□□ -0.81
TPM1-206ENST00000358278 HECTD4Q9Y4D8 3996 aa10.01□□□□□ -0.81
TPM1-206ENST00000358278 H3BRM9 83 aa10.01□□□□□ -0.81
TPM1-206ENST00000358278 TMEM170BQ5T4T1 132 aa10.01□□□□□ -0.81
TPM1-206ENST00000358278 ORAOV1Q8WV07 137 aa10.01□□□□□ -0.81
TPM1-206ENST00000358278 PMCHL2Q9BQD1 86 aa10.01□□□□□ -0.81
TPM1-206ENST00000358278 ZNF22P17026 224 aaPredicted RBP10□□□□□ -0.81
TPM1-206ENST00000358278 PLNP26678 52 aa10□□□□□ -0.81
TPM1-206ENST00000358278 PET117Q6UWS5 81 aa10□□□□□ -0.81
TPM1-206ENST00000358278 SPATA12Q7Z6I5 190 aa10□□□□□ -0.81
TPM1-206ENST00000358278 IGHV3-64A0A075B6Q5 118 aa9.99□□□□□ -0.81
TPM1-206ENST00000358278 GVQW2A0A096LPI5 108 aaPredicted RBP9.99□□□□□ -0.81
TPM1-206ENST00000358278 ZNF561-AS1K7EIQ3 104 aa9.99□□□□□ -0.81
TPM1-206ENST00000358278 DPM2O94777 84 aa9.99□□□□□ -0.81
TPM1-206ENST00000358278 LINC01561Q8N1V8 128 aa9.99□□□□□ -0.81
TPM1-206ENST00000358278 OR10D4PQ8NGN7 298 aa9.99□□□□□ -0.81
TPM1-206ENST00000358278 PKHD1P08F94 4074 aa9.99□□□□□ -0.81
TPM1-206ENST00000358278 LOC105371267A0A1B0GV96 52 aa9.99□□□□□ -0.81
TPM1-206ENST00000358278 SPINK8P0C7L1 97 aa9.99□□□□□ -0.81
TPM1-206ENST00000358278 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
TPM1-206ENST00000358278 DNAH11Q96DT5 4516 aa9.98□□□□□ -0.81
TPM1-206ENST00000358278 IGKCP01834 107 aa9.98□□□□□ -0.81
TPM1-206ENST00000358278 LINC00526Q96FQ7 95 aa9.98□□□□□ -0.81
TPM1-206ENST00000358278 C20orf202A1L168 122 aa9.97□□□□□ -0.81
TPM1-206ENST00000358278 SMIM1B2RUZ4 78 aa9.97□□□□□ -0.81
TPM1-206ENST00000358278 LINC01545Q5VT33 79 aa9.97□□□□□ -0.81
TPM1-206ENST00000358278 TOMM7Q9P0U1 55 aa9.97□□□□□ -0.81
TPM1-206ENST00000358278 A0A1B0GVY2 172 aa9.96□□□□□ -0.81
TPM1-206ENST00000358278 PRSS2P07478 247 aa9.96□□□□□ -0.81
TPM1-206ENST00000358278 KRTAP10-2P60368 255 aa9.96□□□□□ -0.81
TPM1-206ENST00000358278 NTN5Q8WTR8 489 aaPredicted RBP9.96□□□□□ -0.81
TPM1-206ENST00000358278 IGLV5-52A0A0A0MRZ9 124 aa9.96□□□□□ -0.82
TPM1-206ENST00000358278 FUSP35637 526 aaKnown RBP eCLIP9.96□□□□□ -0.82
TPM1-206ENST00000358278 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.94□□□□□ -0.82
TPM1-206ENST00000358278 CDPF1Q6NVV7 123 aa9.94□□□□□ -0.82
TPM1-206ENST00000358278 PGPEP1Q9NXJ5 209 aa9.94□□□□□ -0.82
TPM1-206ENST00000358278 TMEM223A0PJW6 202 aa9.93□□□□□ -0.82
TPM1-206ENST00000358278 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
TPM1-206ENST00000358278 Q8IZM0 81 aa9.93□□□□□ -0.82
TPM1-206ENST00000358278 CAMK2N2Q96S95 79 aa9.93□□□□□ -0.82
TPM1-206ENST00000358278 CNBPP62633 177 aaKnown RBP9.93□□□□□ -0.82
TPM1-206ENST00000358278 COX7B2Q8TF08 81 aa9.93□□□□□ -0.82
TPM1-206ENST00000358278 C2orf48Q96LS8 159 aa9.93□□□□□ -0.82
TPM1-206ENST00000358278 HERVK_113P61574 105 aa9.92□□□□□ -0.82
TPM1-206ENST00000358278 KIAA0087Q14695 138 aa9.92□□□□□ -0.82
TPM1-206ENST00000358278 IGLV5-39A0A0G2JS06 123 aa9.91□□□□□ -0.82
TPM1-206ENST00000358278 NDUFA1O15239 70 aa9.91□□□□□ -0.82
TPM1-206ENST00000358278 SLPIP03973 132 aa9.91□□□□□ -0.82
TPM1-206ENST00000358278 AKR1D1P51857 326 aa9.91□□□□□ -0.82
TPM1-206ENST00000358278 CKS1BP61024 79 aa9.91□□□□□ -0.82
TPM1-206ENST00000358278 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
TPM1-206ENST00000358278 CARD19Q96LW7 228 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms