RNA–Protein interactions for RNA: ENST00000337109.8

MRPL35-202, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MRPL35, Length 3,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-202ENST00000337109 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.67□□□□□ -1.82
MRPL35-202ENST00000337109 LGALS3P17931 250 aaKnown RBP3.67□□□□□ -1.82
MRPL35-202ENST00000337109 RPL24P83731 157 aaKnown RBP3.67□□□□□ -1.82
MRPL35-202ENST00000337109 C4orf48Q5BLP8 95 aa3.67□□□□□ -1.82
MRPL35-202ENST00000337109 SS18L2Q9UHA2 77 aa3.67□□□□□ -1.82
MRPL35-202ENST00000337109 SORL1Q92673 2214 aa3.66□□□□□ -1.82
MRPL35-202ENST00000337109 A0A1B0GUV1 79 aa3.66□□□□□ -1.82
MRPL35-202ENST00000337109 SH2D6Q7Z4S9 175 aa3.66□□□□□ -1.82
MRPL35-202ENST00000337109 TEN1Q86WV5 123 aa3.66□□□□□ -1.82
MRPL35-202ENST00000337109 TRIAP1O43715 76 aa3.66□□□□□ -1.82
MRPL35-202ENST00000337109 NDUFA12Q9UI09 145 aa3.66□□□□□ -1.82
MRPL35-202ENST00000337109 WFDC9Q8NEX5 89 aa3.66□□□□□ -1.82
MRPL35-202ENST00000337109 NSD1Q96L73 2696 aaPredicted RBP3.65□□□□□ -1.82
MRPL35-202ENST00000337109 ZNF561-AS1K7EIQ3 104 aa3.65□□□□□ -1.82
MRPL35-202ENST00000337109 SCGB1D4Q6XE38 83 aa3.65□□□□□ -1.82
MRPL35-202ENST00000337109 LINC00308Q8TCZ7 52 aa3.65□□□□□ -1.82
MRPL35-202ENST00000337109 TEP1Q99973 2627 aaKnown RBP3.65□□□□□ -1.82
MRPL35-202ENST00000337109 TRBV6-8A0A0A6YYG3 113 aa3.65□□□□□ -1.83
MRPL35-202ENST00000337109 IGHV3-38A0A0C4DH36 116 aa3.65□□□□□ -1.83
MRPL35-202ENST00000337109 SPINK8P0C7L1 97 aa3.65□□□□□ -1.83
MRPL35-202ENST00000337109 RNF151Q2KHN1 245 aa3.65□□□□□ -1.83
MRPL35-202ENST00000337109 C6orf226Q5I0X4 101 aa3.65□□□□□ -1.83
MRPL35-202ENST00000337109 A0A087WZ39 114 aa3.65□□□□□ -1.83
MRPL35-202ENST00000337109 LST1O00453 97 aa3.65□□□□□ -1.83
MRPL35-202ENST00000337109 LY6G6DO95868 133 aa3.65□□□□□ -1.83
MRPL35-202ENST00000337109 ETDBQ3ZM63 59 aa3.65□□□□□ -1.83
MRPL35-202ENST00000337109 RNASE13Q5GAN3 156 aaKnown RBP3.65□□□□□ -1.83
MRPL35-202ENST00000337109 LINC00336Q6ZUF6 198 aa3.65□□□□□ -1.83
MRPL35-202ENST00000337109 FAM19A5Q7Z5A7 132 aaPredicted RBP3.65□□□□□ -1.83
MRPL35-202ENST00000337109 FAM19A1Q7Z5A9 133 aa3.65□□□□□ -1.83
MRPL35-202ENST00000337109 NOP10Q9NPE3 64 aaKnown RBP3.65□□□□□ -1.83
MRPL35-202ENST00000337109 IGKV2-28A0A075B6P5 120 aa3.64□□□□□ -1.83
MRPL35-202ENST00000337109 IGKV2D-28P01615 120 aa3.64□□□□□ -1.83
MRPL35-202ENST00000337109 RPL36AP83881 106 aaKnown RBP3.64□□□□□ -1.83
MRPL35-202ENST00000337109 SRSF9Q13242 221 aaKnown RBP eCLIP3.64□□□□□ -1.83
MRPL35-202ENST00000337109 RPL36ALQ969Q0 106 aaKnown RBP3.64□□□□□ -1.83
MRPL35-202ENST00000337109 DNAH9Q9NYC9 4486 aa3.64□□□□□ -1.83
MRPL35-202ENST00000337109 IGLV4-60A0A075B6I1 120 aa3.64□□□□□ -1.83
MRPL35-202ENST00000337109 OBSCN-AS1Q96MR7 158 aa3.64□□□□□ -1.83
MRPL35-202ENST00000337109 TRGV1A0A0A0MS02 117 aa3.64□□□□□ -1.83
MRPL35-202ENST00000337109 IGHV4-28A0A0C4DH34 117 aa3.63□□□□□ -1.83
MRPL35-202ENST00000337109 TRBV10-2A0A0K0K1G8 114 aa3.63□□□□□ -1.83
MRPL35-202ENST00000337109 KIAA0087Q14695 138 aa3.63□□□□□ -1.83
MRPL35-202ENST00000337109 FAM222AQ5U5X8 452 aa3.63□□□□□ -1.83
MRPL35-202ENST00000337109 Q8NAQ8 132 aa3.63□□□□□ -1.83
MRPL35-202ENST00000337109 SMR3AQ99954 134 aa3.63□□□□□ -1.83
MRPL35-202ENST00000337109 ICOSQ9Y6W8 199 aa3.63□□□□□ -1.83
MRPL35-202ENST00000337109 C2CD3Q4AC94 2353 aa3.63□□□□□ -1.83
MRPL35-202ENST00000337109 SEC61GP60059 68 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 LINC01620Q4KN68 170 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 LYRM7Q5U5X0 104 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 ANKRD29Q8N6D5 301 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 PPDPFLQ8WWR9 84 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 LINC00167Q96N53 147 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 CSMD3Q7Z407 3707 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 APOMO95445 188 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 C2orf82Q6UX34 121 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 SMIM20Q8N5G0 67 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 TMEM243Q9BU79 118 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 IGHV3-64A0A075B6Q5 118 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 FAM240AA0A1B0GVK7 77 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 A0A1W2PRX2 142 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 LYRM9A8MSI8 78 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 H3BT86 120 aa3.62□□□□□ -1.83
MRPL35-202ENST00000337109 RPL28P46779 137 aaKnown RBP3.62□□□□□ -1.83
MRPL35-202ENST00000337109 DNAH7Q8WXX0 4024 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 F8P00451 2351 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 HIVEP1P15822 2718 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 CCDC168Q8NDH2 2452 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 LINC00959A0A1B0GUT2 108 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 SLC25A20O43772 301 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 OXTP01178 125 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 PF4P02776 101 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 HTN1P15515 57 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 NANOS2P60321 138 aaKnown RBP3.61□□□□□ -1.83
MRPL35-202ENST00000337109 Q9H8V8 135 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 PRR34Q9NV39 138 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 PRKDCP78527 4128 aaKnown RBP3.61□□□□□ -1.83
MRPL35-202ENST00000337109 PSMB2P49721 201 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 SMAGPQ0VAQ4 97 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 ATXN8Q156A1 80 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 KRTAP26-1Q6PEX3 210 aa3.61□□□□□ -1.83
MRPL35-202ENST00000337109 GAGE12JA6NER3 117 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 XGP55808 180 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 GAGE4Q13068 117 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 C11orf44Q8N8P7 122 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 IBA57-AS1B1ANH7 110 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 COX7A2LO14548 114 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 MALP21145 153 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 EGFEM1PQ0D2K5 195 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 SFTA2Q6UW10 78 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 LINC00337Q8N6G1 96 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 FAM218AQ96MZ4 157 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 GAGE7O76087 117 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 TRACP01848 142 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 GAGE12FP0CL80 117 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 GAGE12GP0CL81 117 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 GAGE12IP0CL82 117 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 Q8IZM0 81 aa3.6□□□□□ -1.83
MRPL35-202ENST00000337109 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms