RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 CELA1Q9UNI1 258 aa5.95□□□□□ -1.46
TDP1-201ENST00000335725 PTPRQQ9UMZ3 2332 aa5.95□□□□□ -1.46
TDP1-201ENST00000335725 XIRP2A4UGR9 3374 aa5.95□□□□□ -1.46
TDP1-201ENST00000335725 MOBPQ13875 183 aa5.95□□□□□ -1.46
TDP1-201ENST00000335725 ZCCHC13Q8WW36 166 aaKnown RBP5.95□□□□□ -1.46
TDP1-201ENST00000335725 B9D2Q9BPU9 175 aa5.95□□□□□ -1.46
TDP1-201ENST00000335725 CCL5P13501 91 aa5.95□□□□□ -1.46
TDP1-201ENST00000335725 M0R2N4 97 aa5.94□□□□□ -1.46
TDP1-201ENST00000335725 CASC2Q6XLA1 102 aa5.94□□□□□ -1.46
TDP1-201ENST00000335725 IGHV4-31P0DP07 118 aa5.94□□□□□ -1.46
TDP1-201ENST00000335725 COX7A1P24310 79 aa5.93□□□□□ -1.46
TDP1-201ENST00000335725 LINC00208Q96KT6 92 aa5.93□□□□□ -1.46
TDP1-201ENST00000335725 IGHV7-81A0A0B4J1V7 117 aa5.93□□□□□ -1.46
TDP1-201ENST00000335725 LINC00575Q6W349 94 aa5.93□□□□□ -1.46
TDP1-201ENST00000335725 Q9BRP9 147 aa5.93□□□□□ -1.46
TDP1-201ENST00000335725 KAAG1Q9UBP8 84 aa5.93□□□□□ -1.46
TDP1-201ENST00000335725 ASXL3Q9C0F0 2248 aa5.93□□□□□ -1.46
TDP1-201ENST00000335725 NANOS2P60321 138 aaKnown RBP5.92□□□□□ -1.46
TDP1-201ENST00000335725 ASB16-AS1Q495Z4 193 aa5.92□□□□□ -1.46
TDP1-201ENST00000335725 FAM30AQ9NZY2 134 aa5.92□□□□□ -1.46
TDP1-201ENST00000335725 TOMM7Q9P0U1 55 aa5.92□□□□□ -1.46
TDP1-201ENST00000335725 DPM3Q9P2X0 92 aa5.92□□□□□ -1.46
TDP1-201ENST00000335725 ZFHX3Q15911 3703 aa5.92□□□□□ -1.46
TDP1-201ENST00000335725 C3orf84H3BNL1 204 aa5.91□□□□□ -1.46
TDP1-201ENST00000335725 SEM1Q6ZVN7 128 aa5.91□□□□□ -1.46
TDP1-201ENST00000335725 DEFB119Q8N690 84 aa5.91□□□□□ -1.46
TDP1-201ENST00000335725 SZT2Q5T011 3432 aa5.91□□□□□ -1.46
TDP1-201ENST00000335725 ETDCA0A1B0GVM5 59 aa5.91□□□□□ -1.46
TDP1-201ENST00000335725 C19orf84I3L1E1 186 aa5.91□□□□□ -1.46
TDP1-201ENST00000335725 USP34Q70CQ2 3546 aa5.91□□□□□ -1.46
TDP1-201ENST00000335725 IGHV4-38-2P0DP08 117 aa5.91□□□□□ -1.46
TDP1-201ENST00000335725 KLK9Q2XQG4 91 aa5.91□□□□□ -1.46
TDP1-201ENST00000335725 LINC01006Q8NI28 216 aa5.91□□□□□ -1.46
TDP1-201ENST00000335725 TRGV2A0A075B6R0 118 aa5.9□□□□□ -1.46
TDP1-201ENST00000335725 ATP6V0E1O15342 81 aa5.9□□□□□ -1.46
TDP1-201ENST00000335725 LYPD2Q6UXB3 125 aa5.9□□□□□ -1.46
TDP1-201ENST00000335725 COX7BP24311 80 aa5.9□□□□□ -1.46
TDP1-201ENST00000335725 H0Y9J4 135 aa5.9□□□□□ -1.47
TDP1-201ENST00000335725 PRR4Q16378 134 aa5.9□□□□□ -1.47
TDP1-201ENST00000335725 A0A096LNT2 108 aa5.89□□□□□ -1.47
TDP1-201ENST00000335725 NDUFA4O00483 81 aa5.89□□□□□ -1.47
TDP1-201ENST00000335725 SPANXA2-OT1Q8N9U9 137 aa5.89□□□□□ -1.47
TDP1-201ENST00000335725 IGLV4-60A0A075B6I1 120 aa5.89□□□□□ -1.47
TDP1-201ENST00000335725 C6orf99Q4VX62 202 aa5.88□□□□□ -1.47
TDP1-201ENST00000335725 SMIM29Q86T20 159 aa5.88□□□□□ -1.47
TDP1-201ENST00000335725 IGHV3-73A0A0B4J1V6 119 aa5.88□□□□□ -1.47
TDP1-201ENST00000335725 DEFB1P60022 68 aa5.88□□□□□ -1.47
TDP1-201ENST00000335725 MINOS1Q5TGZ0 78 aa5.88□□□□□ -1.47
TDP1-201ENST00000335725 Q8N9L7 120 aa5.88□□□□□ -1.47
TDP1-201ENST00000335725 A0A087X002 238 aa5.88□□□□□ -1.47
TDP1-201ENST00000335725 PLA2G1BP04054 148 aaKnown RBP5.87□□□□□ -1.47
TDP1-201ENST00000335725 WDR87Q6ZQQ6 2873 aa5.87□□□□□ -1.47
TDP1-201ENST00000335725 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.87□□□□□ -1.47
TDP1-201ENST00000335725 IGHV3-53P01767 116 aa5.87□□□□□ -1.47
TDP1-201ENST00000335725 URB1O60287 2271 aaKnown RBP5.86□□□□□ -1.47
TDP1-201ENST00000335725 PRB2P02812 416 aaPredicted RBP5.86□□□□□ -1.47
TDP1-201ENST00000335725 HIGD2BQ4VC39 106 aa5.86□□□□□ -1.47
TDP1-201ENST00000335725 UNC80Q8N2C7 3258 aa5.85□□□□□ -1.47
TDP1-201ENST00000335725 WFDC10AQ9H1F0 79 aa5.85□□□□□ -1.47
TDP1-201ENST00000335725 Q6ZQY7 126 aa5.85□□□□□ -1.47
TDP1-201ENST00000335725 C18orf65Q6ZTR6 163 aa5.85□□□□□ -1.47
TDP1-201ENST00000335725 PROK1P58294 105 aa5.85□□□□□ -1.47
TDP1-201ENST00000335725 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.85□□□□□ -1.47
TDP1-201ENST00000335725 PRAC1Q96KF2 57 aa5.84□□□□□ -1.47
TDP1-201ENST00000335725 ZNF706Q9Y5V0 76 aaPredicted RBP5.84□□□□□ -1.47
TDP1-201ENST00000335725 FAM186AA6NE01 2351 aa5.84□□□□□ -1.47
TDP1-201ENST00000335725 SORL1Q92673 2214 aa5.84□□□□□ -1.48
TDP1-201ENST00000335725 ODF3BA8MYP8 253 aa5.83□□□□□ -1.48
TDP1-201ENST00000335725 RETNLBQ9BQ08 111 aa5.83□□□□□ -1.48
TDP1-201ENST00000335725 RANBP2P49792 3224 aaKnown RBP5.83□□□□□ -1.48
TDP1-201ENST00000335725 Q8N9W7 124 aa5.83□□□□□ -1.48
TDP1-201ENST00000335725 IGKV3-7A0A075B6H7 116 aa5.82□□□□□ -1.48
TDP1-201ENST00000335725 A0A1B0GW54 56 aa5.82□□□□□ -1.48
TDP1-201ENST00000335725 FSHBP01225 129 aa5.82□□□□□ -1.48
TDP1-201ENST00000335725 DNAH14Q0VDD8 3507 aa5.82□□□□□ -1.48
TDP1-201ENST00000335725 BSPH1Q075Z2 132 aa5.82□□□□□ -1.48
TDP1-201ENST00000335725 LINC00612Q8N6U2 182 aa5.82□□□□□ -1.48
TDP1-201ENST00000335725 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
TDP1-201ENST00000335725 WNK2Q9Y3S1 2297 aa5.81□□□□□ -1.48
TDP1-201ENST00000335725 H3BPC8 53 aa5.81□□□□□ -1.48
TDP1-201ENST00000335725 SPAG11BQ08648 103 aa5.81□□□□□ -1.48
TDP1-201ENST00000335725 RHPN1-AS1Q9BWJ2 59 aa5.81□□□□□ -1.48
TDP1-201ENST00000335725 COX17Q14061 63 aa5.8□□□□□ -1.48
TDP1-201ENST00000335725 KCNQ1DNQ9H478 68 aa5.79□□□□□ -1.48
TDP1-201ENST00000335725 SPINK13Q1W4C9 94 aa5.79□□□□□ -1.48
TDP1-201ENST00000335725 Q6ZSN1 163 aa5.79□□□□□ -1.48
TDP1-201ENST00000335725 PLA2G2AP14555 144 aa5.78□□□□□ -1.48
TDP1-201ENST00000335725 AHCTF1Q8WYP5 2266 aa5.78□□□□□ -1.48
TDP1-201ENST00000335725 IGHV4-30-2A0A087WSY4 118 aa5.78□□□□□ -1.48
TDP1-201ENST00000335725 IGHV3OR16-9A0A0B4J2B5 98 aa5.78□□□□□ -1.48
TDP1-201ENST00000335725 C10orf25Q5T742 122 aa5.78□□□□□ -1.48
TDP1-201ENST00000335725 FAM215AQ9Y5M1 114 aa5.78□□□□□ -1.48
TDP1-201ENST00000335725 IGKV3-20P01619 116 aa5.77□□□□□ -1.49
TDP1-201ENST00000335725 MINOS1-NBL1R4GNA1 71 aa5.77□□□□□ -1.49
TDP1-201ENST00000335725 LMO4P61968 165 aa5.77□□□□□ -1.49
TDP1-201ENST00000335725 ST20-AS1Q8NBB2 130 aa5.77□□□□□ -1.49
TDP1-201ENST00000335725 PRR3P79522 188 aaKnown RBP5.77□□□□□ -1.49
TDP1-201ENST00000335725 VPS13AQ96RL7 3174 aa5.77□□□□□ -1.49
TDP1-201ENST00000335725 A0A0A0MQY5 61 aa5.76□□□□□ -1.49
TDP1-201ENST00000335725 LY6G6EA0A0G2JKS1 128 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms