RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 COX6A2Q02221 97 aa13.92□□□□□ -0.18
AP3S1-201ENST00000316788 CDC42SE2Q9NRR3 84 aa13.92□□□□□ -0.18
AP3S1-201ENST00000316788 C19orf73Q9NVV2 129 aa13.92□□□□□ -0.18
AP3S1-201ENST00000316788 TRBV10-2A0A0K0K1G8 114 aa13.91□□□□□ -0.18
AP3S1-201ENST00000316788 TRBV6-4A0A1B0GX49 114 aa13.91□□□□□ -0.18
AP3S1-201ENST00000316788 PLAC8L1A1L4L8 177 aa13.91□□□□□ -0.18
AP3S1-201ENST00000316788 TMEM262E9PQX1 116 aa13.91□□□□□ -0.18
AP3S1-201ENST00000316788 SMIM1B2RUZ4 78 aa13.9□□□□□ -0.18
AP3S1-201ENST00000316788 NOP10Q9NPE3 64 aaKnown RBP13.9□□□□□ -0.18
AP3S1-201ENST00000316788 RPL13AP40429 203 aaKnown RBP13.89□□□□□ -0.19
AP3S1-201ENST00000316788 HERV-K104P63124 156 aa13.89□□□□□ -0.19
AP3S1-201ENST00000316788 TMEM243Q9BU79 118 aa13.89□□□□□ -0.19
AP3S1-201ENST00000316788 GAGE12JA6NER3 117 aa13.88□□□□□ -0.19
AP3S1-201ENST00000316788 NDUFA7O95182 113 aa13.88□□□□□ -0.19
AP3S1-201ENST00000316788 GAGE4Q13068 117 aa13.88□□□□□ -0.19
AP3S1-201ENST00000316788 GAGE5Q13069 117 aa13.88□□□□□ -0.19
AP3S1-201ENST00000316788 PRIMA1Q86XR5 153 aa13.88□□□□□ -0.19
AP3S1-201ENST00000316788 CSNK1G2-AS1Q8NCQ2 148 aa13.88□□□□□ -0.19
AP3S1-201ENST00000316788 Q9H8V8 135 aa13.87□□□□□ -0.19
AP3S1-201ENST00000316788 F5H768 121 aa13.87□□□□□ -0.19
AP3S1-201ENST00000316788 H3BT86 120 aa13.87□□□□□ -0.19
AP3S1-201ENST00000316788 LINC00308Q8TCZ7 52 aa13.87□□□□□ -0.19
AP3S1-201ENST00000316788 ZNF625Q96I27 306 aaPredicted RBP13.87□□□□□ -0.19
AP3S1-201ENST00000316788 C2CD3Q4AC94 2353 aa13.84□□□□□ -0.19
AP3S1-201ENST00000316788 UBE2L6O14933 153 aa13.84□□□□□ -0.19
AP3S1-201ENST00000316788 TRGV2A0A075B6R0 118 aa13.84□□□□□ -0.19
AP3S1-201ENST00000316788 LST1O00453 97 aa13.84□□□□□ -0.19
AP3S1-201ENST00000316788 TRAV13-1A0A0B4J241 112 aa13.83□□□□□ -0.2
AP3S1-201ENST00000316788 GAGE7O76087 117 aa13.82□□□□□ -0.2
AP3S1-201ENST00000316788 GAGE12FP0CL80 117 aa13.82□□□□□ -0.2
AP3S1-201ENST00000316788 GAGE12GP0CL81 117 aa13.82□□□□□ -0.2
AP3S1-201ENST00000316788 GAGE12IP0CL82 117 aa13.82□□□□□ -0.2
AP3S1-201ENST00000316788 FBN1P35555 2871 aaKnown RBP13.81□□□□□ -0.2
AP3S1-201ENST00000316788 RPL35AP18077 110 aaKnown RBP13.81□□□□□ -0.2
AP3S1-201ENST00000316788 NPC2P61916 151 aa13.81□□□□□ -0.2
AP3S1-201ENST00000316788 NTN5Q8WTR8 489 aaPredicted RBP13.81□□□□□ -0.2
AP3S1-201ENST00000316788 XGP55808 180 aa13.8□□□□□ -0.2
AP3S1-201ENST00000316788 WFDC10AQ9H1F0 79 aa13.79□□□□□ -0.2
AP3S1-201ENST00000316788 ATRQ13535 2644 aa13.79□□□□□ -0.2
AP3S1-201ENST00000316788 TRGV4A0A0C4DH28 118 aa13.78□□□□□ -0.2
AP3S1-201ENST00000316788 A0A1B0GV72 72 aa13.78□□□□□ -0.2
AP3S1-201ENST00000316788 FHL2Q14192 279 aa13.78□□□□□ -0.2
AP3S1-201ENST00000316788 C2orf82Q6UX34 121 aa13.78□□□□□ -0.2
AP3S1-201ENST00000316788 DAND5Q8N907 189 aa13.78□□□□□ -0.2
AP3S1-201ENST00000316788 UBE2WQ96B02 151 aa13.78□□□□□ -0.2
AP3S1-201ENST00000316788 MT-ATP8P03928 68 aa13.78□□□□□ -0.2
AP3S1-201ENST00000316788 MEIG1Q5JSS6 88 aa13.77□□□□□ -0.21
AP3S1-201ENST00000316788 LINC00612Q8N6U2 182 aa13.77□□□□□ -0.21
AP3S1-201ENST00000316788 KIR2DL5BQ8NHK3 375 aa13.77□□□□□ -0.21
AP3S1-201ENST00000316788 TRBV6-8A0A0A6YYG3 113 aa13.76□□□□□ -0.21
AP3S1-201ENST00000316788 SHISA2Q6UWI4 295 aa13.76□□□□□ -0.21
AP3S1-201ENST00000316788 SOSTDC1Q6X4U4 206 aa13.76□□□□□ -0.21
AP3S1-201ENST00000316788 KRTAP24-1Q3LI83 254 aa13.76□□□□□ -0.21
AP3S1-201ENST00000316788 DEFB121Q5J5C9 76 aa13.76□□□□□ -0.21
AP3S1-201ENST00000316788 LOC100131303A0A0U1RQF7 123 aa13.75□□□□□ -0.21
AP3S1-201ENST00000316788 COX7A2LO14548 114 aa13.75□□□□□ -0.21
AP3S1-201ENST00000316788 FAM222AQ5U5X8 452 aa13.75□□□□□ -0.21
AP3S1-201ENST00000316788 CLEC2BQ92478 149 aa13.75□□□□□ -0.21
AP3S1-201ENST00000316788 PF4P02776 101 aa13.74□□□□□ -0.21
AP3S1-201ENST00000316788 COX7B2Q8TF08 81 aa13.73□□□□□ -0.21
AP3S1-201ENST00000316788 TRAV8-4A0A0B4J246 113 aa13.71□□□□□ -0.21
AP3S1-201ENST00000316788 TEX49A0A1B0GTD5 131 aa13.71□□□□□ -0.21
AP3S1-201ENST00000316788 FAM240AA0A1B0GVK7 77 aa13.71□□□□□ -0.21
AP3S1-201ENST00000316788 GAGE6Q13070 117 aa13.71□□□□□ -0.21
AP3S1-201ENST00000316788 IGHV3OR16-9A0A0B4J2B5 98 aa13.7□□□□□ -0.22
AP3S1-201ENST00000316788 CITED1Q99966 193 aa13.7□□□□□ -0.22
AP3S1-201ENST00000316788 MRPL23Q16540 153 aaKnown RBP13.7□□□□□ -0.22
AP3S1-201ENST00000316788 LINC00482Q8N8I6 264 aa13.7□□□□□ -0.22
AP3S1-201ENST00000316788 TRAV13-2A0A0B4J235 113 aa13.69□□□□□ -0.22
AP3S1-201ENST00000316788 SMIM9A6NGZ8 99 aa13.69□□□□□ -0.22
AP3S1-201ENST00000316788 TRACP01848 142 aa13.69□□□□□ -0.22
AP3S1-201ENST00000316788 CKS1BP61024 79 aa13.69□□□□□ -0.22
AP3S1-201ENST00000316788 A0A087WZ39 114 aa13.68□□□□□ -0.22
AP3S1-201ENST00000316788 IGLV4-60A0A075B6I1 120 aa13.67□□□□□ -0.22
AP3S1-201ENST00000316788 CHCHD5Q9BSY4 110 aa13.67□□□□□ -0.22
AP3S1-201ENST00000316788 TENM1Q9UKZ4 2725 aa13.67□□□□□ -0.22
AP3S1-201ENST00000316788 A0A0U1RRA0 63 aa13.67□□□□□ -0.22
AP3S1-201ENST00000316788 IBA57-AS1B1ANH7 110 aa13.66□□□□□ -0.22
AP3S1-201ENST00000316788 KRTAP10-3P60369 221 aa13.66□□□□□ -0.22
AP3S1-201ENST00000316788 Q6Q795 121 aa13.66□□□□□ -0.22
AP3S1-201ENST00000316788 LINC01561Q8N1V8 128 aa13.66□□□□□ -0.22
AP3S1-201ENST00000316788 A0A1B0GUV1 79 aa13.64□□□□□ -0.23
AP3S1-201ENST00000316788 RPL28P46779 137 aaKnown RBP13.64□□□□□ -0.23
AP3S1-201ENST00000316788 SNCGO76070 127 aa13.64□□□□□ -0.23
AP3S1-201ENST00000316788 COL6A5A8TX70 2615 aa13.64□□□□□ -0.23
AP3S1-201ENST00000316788 MIR7-3HGQ8N6C7 128 aa13.63□□□□□ -0.23
AP3S1-201ENST00000316788 X6R8D5 127 aa13.63□□□□□ -0.23
AP3S1-201ENST00000316788 TRAV26-1A0A087WT03 109 aa13.62□□□□□ -0.23
AP3S1-201ENST00000316788 LINC00959A0A1B0GUT2 108 aa13.62□□□□□ -0.23
AP3S1-201ENST00000316788 CRPP02741 224 aa13.62□□□□□ -0.23
AP3S1-201ENST00000316788 MDFIQ99750 246 aa13.62□□□□□ -0.23
AP3S1-201ENST00000316788 LYRM9A8MSI8 78 aa13.61□□□□□ -0.23
AP3S1-201ENST00000316788 PRO0255Q9UI72 69 aa13.61□□□□□ -0.23
AP3S1-201ENST00000316788 ACYP1P07311 99 aa13.6□□□□□ -0.23
AP3S1-201ENST00000316788 DEFB130BP0DP73 79 aa13.6□□□□□ -0.23
AP3S1-201ENST00000316788 DEFB130AP0DP74 79 aa13.6□□□□□ -0.23
AP3S1-201ENST00000316788 GYPEP15421 78 aa13.6□□□□□ -0.23
AP3S1-201ENST00000316788 SND1-IT1Q9HBX3 110 aa13.6□□□□□ -0.23
AP3S1-201ENST00000316788 TOMM7Q9P0U1 55 aa13.6□□□□□ -0.23
AP3S1-201ENST00000316788 GAGE2BQ13066 116 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms