RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 MALP21145 153 aa16.08■□□□□ 0.16
HOXC9-201ENST00000303450 KRTAP10-2P60368 255 aa16.08■□□□□ 0.16
HOXC9-201ENST00000303450 C5orf38Q86SI9 138 aa16.08■□□□□ 0.16
HOXC9-201ENST00000303450 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.07■□□□□ 0.16
HOXC9-201ENST00000303450 LEPROTL1O95214 131 aa16.07■□□□□ 0.16
HOXC9-201ENST00000303450 SEC11AP67812 179 aa16.07■□□□□ 0.16
HOXC9-201ENST00000303450 IFI27L1Q96BM0 104 aa16.07■□□□□ 0.16
HOXC9-201ENST00000303450 DNAH11Q96DT5 4516 aa16.06■□□□□ 0.16
HOXC9-201ENST00000303450 IGHV3OR16-9A0A0B4J2B5 98 aa16.06■□□□□ 0.16
HOXC9-201ENST00000303450 COX6A2Q02221 97 aa16.06■□□□□ 0.16
HOXC9-201ENST00000303450 FAM19A3Q7Z5A8 133 aa16.06■□□□□ 0.16
HOXC9-201ENST00000303450 PGPEP1Q9NXJ5 209 aa16.06■□□□□ 0.16
HOXC9-201ENST00000303450 PRSS1P07477 247 aa16.05■□□□□ 0.16
HOXC9-201ENST00000303450 C15orf56Q8N910 161 aa16.05■□□□□ 0.16
HOXC9-201ENST00000303450 NTN5Q8WTR8 489 aaPredicted RBP16.05■□□□□ 0.16
HOXC9-201ENST00000303450 IGHV1-58A0A0C4DH39 117 aa16.04■□□□□ 0.16
HOXC9-201ENST00000303450 A0A0J9YXV3 536 aa16.04■□□□□ 0.16
HOXC9-201ENST00000303450 hDV102S1A0JD36 115 aa16.04■□□□□ 0.16
HOXC9-201ENST00000303450 FUSP35637 526 aaKnown RBP eCLIP16.04■□□□□ 0.168e-8■■■■□ 24.1
HOXC9-201ENST00000303450 COA6Q5JTJ3 125 aaKnown RBP16.04■□□□□ 0.16
HOXC9-201ENST00000303450 GEMIN7Q9H840 131 aaKnown RBP16.04■□□□□ 0.16
HOXC9-201ENST00000303450 HERVK_113P63121 156 aa16.04■□□□□ 0.16
HOXC9-201ENST00000303450 FABP4P15090 132 aa16.03■□□□□ 0.16
HOXC9-201ENST00000303450 CDPF1Q6NVV7 123 aa16.03■□□□□ 0.16
HOXC9-201ENST00000303450 HSPB8Q9UJY1 196 aa16.03■□□□□ 0.16
HOXC9-201ENST00000303450 IGLV5-52A0A0A0MRZ9 124 aa16.02■□□□□ 0.15
HOXC9-201ENST00000303450 APOMO95445 188 aa16.02■□□□□ 0.15
HOXC9-201ENST00000303450 HIGD2BQ4VC39 106 aa16.02■□□□□ 0.15
HOXC9-201ENST00000303450 TINCRA0A1B0GVN0 87 aa16.01■□□□□ 0.15
HOXC9-201ENST00000303450 EPPK1P58107 5090 aaKnown RBP16.01■□□□□ 0.15
HOXC9-201ENST00000303450 A0A087WZ39 114 aa16■□□□□ 0.15
HOXC9-201ENST00000303450 GVQW2A0A096LPI5 108 aaPredicted RBP15.99■□□□□ 0.15
HOXC9-201ENST00000303450 C16orf90A8MZG2 172 aa15.99■□□□□ 0.15
HOXC9-201ENST00000303450 PKHD1P08F94 4074 aa15.98■□□□□ 0.15
HOXC9-201ENST00000303450 TRAV12-1A0A0B4J245 112 aa15.98■□□□□ 0.15
HOXC9-201ENST00000303450 LINC00469Q8N7U9 141 aa15.98■□□□□ 0.15
HOXC9-201ENST00000303450 CDKN2A-AS1Q9UH64 79 aa15.98■□□□□ 0.15
HOXC9-201ENST00000303450 H0Y8G0 127 aa15.97■□□□□ 0.15
HOXC9-201ENST00000303450 ZNF561-AS1K7EIQ3 104 aa15.97■□□□□ 0.15
HOXC9-201ENST00000303450 CHTOPQ9Y3Y2 248 aaKnown RBP15.97■□□□□ 0.15
HOXC9-201ENST00000303450 IGLC3P0DOY3 106 aa15.96■□□□□ 0.15
HOXC9-201ENST00000303450 IGHV3-64A0A075B6Q5 118 aa15.95■□□□□ 0.14
HOXC9-201ENST00000303450 LINC01561Q8N1V8 128 aa15.95■□□□□ 0.14
HOXC9-201ENST00000303450 ORAOV1Q8WV07 137 aa15.95■□□□□ 0.14
HOXC9-201ENST00000303450 CHAC1Q9BUX1 264 aa15.95■□□□□ 0.14
HOXC9-201ENST00000303450 OR10D4PQ8NGN7 298 aa15.94■□□□□ 0.14
HOXC9-201ENST00000303450 PACRGQ96M98 296 aaPredicted RBP15.94■□□□□ 0.14
HOXC9-201ENST00000303450 IGLV4-69A0A075B6H9 119 aa15.94■□□□□ 0.14
HOXC9-201ENST00000303450 IGLV5-45A0A087WSX0 123 aa15.94■□□□□ 0.14
HOXC9-201ENST00000303450 S100A6P06703 90 aa15.94■□□□□ 0.14
HOXC9-201ENST00000303450 LINC00526Q96FQ7 95 aa15.94■□□□□ 0.14
HOXC9-201ENST00000303450 GCSHP23434 173 aa15.93■□□□□ 0.14
HOXC9-201ENST00000303450 CNBPP62633 177 aaKnown RBP15.93■□□□□ 0.14
HOXC9-201ENST00000303450 SPAG11BQ08648 103 aa15.93■□□□□ 0.14
HOXC9-201ENST00000303450 MAP1LC3CQ9BXW4 147 aa15.93■□□□□ 0.14
HOXC9-201ENST00000303450 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.92■□□□□ 0.14
HOXC9-201ENST00000303450 DNAH5Q8TE73 4624 aa15.91■□□□□ 0.14
HOXC9-201ENST00000303450 F8VRH5 84 aa15.91■□□□□ 0.14
HOXC9-201ENST00000303450 SLPIP03973 132 aa15.91■□□□□ 0.14
HOXC9-201ENST00000303450 MRPL35Q9NZE8 188 aaKnown RBP15.91■□□□□ 0.14
HOXC9-201ENST00000303450 H3BRM9 83 aa15.9■□□□□ 0.14
HOXC9-201ENST00000303450 C11orf86A6NJI1 115 aa15.89■□□□□ 0.13
HOXC9-201ENST00000303450 ODF1Q14990 250 aa15.89■□□□□ 0.13
HOXC9-201ENST00000303450 ZNF22P17026 224 aaPredicted RBP15.88■□□□□ 0.13
HOXC9-201ENST00000303450 LINC01620Q4KN68 170 aa15.88■□□□□ 0.13
HOXC9-201ENST00000303450 TMEM170BQ5T4T1 132 aa15.87■□□□□ 0.13
HOXC9-201ENST00000303450 C9orf163Q8N9P6 203 aa15.87■□□□□ 0.13
HOXC9-201ENST00000303450 C2orf48Q96LS8 159 aa15.87■□□□□ 0.13
HOXC9-201ENST00000303450 CAMK2N2Q96S95 79 aa15.87■□□□□ 0.13
HOXC9-201ENST00000303450 TOMM7Q9P0U1 55 aa15.87■□□□□ 0.13
HOXC9-201ENST00000303450 SMIM1B2RUZ4 78 aa15.86■□□□□ 0.13
HOXC9-201ENST00000303450 SPINK8P0C7L1 97 aa15.86■□□□□ 0.13
HOXC9-201ENST00000303450 SYCNQ0VAF6 134 aa15.86■□□□□ 0.13
HOXC9-201ENST00000303450 PRSS2P07478 247 aa15.85■□□□□ 0.13
HOXC9-201ENST00000303450 CARD19Q96LW7 228 aa15.85■□□□□ 0.13
HOXC9-201ENST00000303450 SYS1-DBNDD2H3BUS1 97 aa15.84■□□□□ 0.13
HOXC9-201ENST00000303450 S100A2P29034 98 aa15.84■□□□□ 0.13
HOXC9-201ENST00000303450 KRTAP10-1P60331 282 aa15.84■□□□□ 0.13
HOXC9-201ENST00000303450 KIAA0087Q14695 138 aa15.84■□□□□ 0.13
HOXC9-201ENST00000303450 HIST3H2BBQ8N257 126 aa15.84■□□□□ 0.13
HOXC9-201ENST00000303450 F8WDY8 70 aa15.83■□□□□ 0.12
HOXC9-201ENST00000303450 C6orf226Q5I0X4 101 aa15.83■□□□□ 0.12
HOXC9-201ENST00000303450 Q8IZM0 81 aa15.83■□□□□ 0.12
HOXC9-201ENST00000303450 NDUFA1O15239 70 aa15.82■□□□□ 0.12
HOXC9-201ENST00000303450 SNRPEP62304 92 aaKnown RBP15.82■□□□□ 0.12
HOXC9-201ENST00000303450 Q6ZRU5 148 aa15.82■□□□□ 0.12
HOXC9-201ENST00000303450 PMCHL2Q9BQD1 86 aa15.82■□□□□ 0.12
HOXC9-201ENST00000303450 DYNC1H1Q14204 4646 aaKnown RBP15.82■□□□□ 0.12
HOXC9-201ENST00000303450 PLNP26678 52 aa15.81■□□□□ 0.12
HOXC9-201ENST00000303450 DPM2O94777 84 aa15.8■□□□□ 0.12
HOXC9-201ENST00000303450 C3orf79P0CE67 100 aa15.8■□□□□ 0.12
HOXC9-201ENST00000303450 KRTDAPP60985 99 aa15.8■□□□□ 0.12
HOXC9-201ENST00000303450 CKS1BP61024 79 aa15.79■□□□□ 0.12
HOXC9-201ENST00000303450 PET117Q6UWS5 81 aa15.79■□□□□ 0.12
HOXC9-201ENST00000303450 COX7B2Q8TF08 81 aa15.79■□□□□ 0.12
HOXC9-201ENST00000303450 LRP1BQ9NZR2 4599 aa15.79■□□□□ 0.12
HOXC9-201ENST00000303450 UNQ6190/PRO20217Q6UXQ8 127 aa15.78■□□□□ 0.12
HOXC9-201ENST00000303450 HIST1H2BLQ99880 126 aa15.78■□□□□ 0.12
HOXC9-201ENST00000303450 IGKCP01834 107 aa15.78■□□□□ 0.12
HOXC9-201ENST00000303450 C2orf82Q6UX34 121 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms