RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 SMIM20Q8N5G0 67 aa10.26□□□□□ -0.77
SMG8-201ENST00000300917 TMEM101Q96IK0 257 aa10.25□□□□□ -0.77
SMG8-201ENST00000300917 CFC1BP0CG36 223 aa10.25□□□□□ -0.77
SMG8-201ENST00000300917 CFC1P0CG37 223 aa10.25□□□□□ -0.77
SMG8-201ENST00000300917 CDC42SE2Q9NRR3 84 aa10.25□□□□□ -0.77
SMG8-201ENST00000300917 IGHV4-28A0A0C4DH34 117 aa10.24□□□□□ -0.77
SMG8-201ENST00000300917 TOMM7Q9P0U1 55 aa10.24□□□□□ -0.77
SMG8-201ENST00000300917 CELA1Q9UNI1 258 aa10.24□□□□□ -0.77
SMG8-201ENST00000300917 TSPAN13O95857 204 aa10.23□□□□□ -0.77
SMG8-201ENST00000300917 IGHV4-30-4P0DP06 118 aa10.23□□□□□ -0.77
SMG8-201ENST00000300917 RPL24P83731 157 aaKnown RBP10.23□□□□□ -0.77
SMG8-201ENST00000300917 SBSPONQ8IVN8 264 aa10.23□□□□□ -0.77
SMG8-201ENST00000300917 G3V4G9 280 aa10.23□□□□□ -0.77
SMG8-201ENST00000300917 EIF4EBP3O60516 100 aaPredicted RBP10.23□□□□□ -0.77
SMG8-201ENST00000300917 TRBV6-8A0A0A6YYG3 113 aa10.22□□□□□ -0.77
SMG8-201ENST00000300917 Q9H8V8 135 aa10.22□□□□□ -0.77
SMG8-201ENST00000300917 M0QXV9 152 aa10.22□□□□□ -0.77
SMG8-201ENST00000300917 KRTAP24-1Q3LI83 254 aa10.22□□□□□ -0.77
SMG8-201ENST00000300917 CYSRT1A8MQ03 144 aa10.22□□□□□ -0.77
SMG8-201ENST00000300917 PSMB2P49721 201 aa10.22□□□□□ -0.77
SMG8-201ENST00000300917 Q8N3U1 123 aa10.22□□□□□ -0.77
SMG8-201ENST00000300917 RETNQ9HD89 108 aa10.22□□□□□ -0.77
SMG8-201ENST00000300917 Q1RN00 199 aa10.21□□□□□ -0.77
SMG8-201ENST00000300917 ATP6V0E2Q8NHE4 81 aa10.21□□□□□ -0.77
SMG8-201ENST00000300917 C11orf68Q9H3H3 251 aaKnown RBP10.21□□□□□ -0.77
SMG8-201ENST00000300917 WFDC2Q14508 124 aa10.21□□□□□ -0.78
SMG8-201ENST00000300917 PAX4O43316 350 aa10.2□□□□□ -0.78
SMG8-201ENST00000300917 SCGB1C2P0DMR2 95 aa10.2□□□□□ -0.78
SMG8-201ENST00000300917 SPANXB1Q9NS25 103 aaPredicted RBP10.2□□□□□ -0.78
SMG8-201ENST00000300917 A0A1B0GWB2 263 aa10.2□□□□□ -0.78
SMG8-201ENST00000300917 DAD1P61803 113 aa10.2□□□□□ -0.78
SMG8-201ENST00000300917 HERVK_113P63121 156 aa10.2□□□□□ -0.78
SMG8-201ENST00000300917 F5H768 121 aa10.2□□□□□ -0.78
SMG8-201ENST00000300917 APOC4P55056 127 aa10.2□□□□□ -0.78
SMG8-201ENST00000300917 C5orf38Q86SI9 138 aa10.2□□□□□ -0.78
SMG8-201ENST00000300917 KIR2DL5BQ8NHK3 375 aa10.19□□□□□ -0.78
SMG8-201ENST00000300917 SMIM1B2RUZ4 78 aa10.19□□□□□ -0.78
SMG8-201ENST00000300917 C3orf56Q8N813 242 aa10.19□□□□□ -0.78
SMG8-201ENST00000300917 TENM3Q9P273 2699 aa10.19□□□□□ -0.78
SMG8-201ENST00000300917 TIRAPP58753 221 aa10.18□□□□□ -0.78
SMG8-201ENST00000300917 SH2D6Q7Z4S9 175 aa10.18□□□□□ -0.78
SMG8-201ENST00000300917 LITAFQ99732 161 aa10.18□□□□□ -0.78
SMG8-201ENST00000300917 PRIMA1Q86XR5 153 aa10.18□□□□□ -0.78
SMG8-201ENST00000300917 PRO1854Q9UHT4 67 aa10.18□□□□□ -0.78
SMG8-201ENST00000300917 PRO0255Q9UI72 69 aa10.18□□□□□ -0.78
SMG8-201ENST00000300917 MEIG1Q5JSS6 88 aa10.18□□□□□ -0.78
SMG8-201ENST00000300917 ZFAND6Q6FIF0 208 aa10.17□□□□□ -0.78
SMG8-201ENST00000300917 XCL1P47992 114 aa10.17□□□□□ -0.78
SMG8-201ENST00000300917 PRB2P02812 416 aaPredicted RBP10.16□□□□□ -0.78
SMG8-201ENST00000300917 ETDBQ3ZM63 59 aa10.16□□□□□ -0.78
SMG8-201ENST00000300917 IGLV10-54A0A075B6I4 117 aa10.16□□□□□ -0.78
SMG8-201ENST00000300917 KRTAP10-11P60412 298 aa10.15□□□□□ -0.78
SMG8-201ENST00000300917 CSDC2Q9Y534 153 aaKnown RBP10.15□□□□□ -0.78
SMG8-201ENST00000300917 NBEAL1Q6ZS30 2694 aa10.15□□□□□ -0.78
SMG8-201ENST00000300917 WFDC9Q8NEX5 89 aa10.15□□□□□ -0.78
SMG8-201ENST00000300917 IGLV5-45A0A087WSX0 123 aa10.15□□□□□ -0.79
SMG8-201ENST00000300917 SMIM9A6NGZ8 99 aa10.15□□□□□ -0.79
SMG8-201ENST00000300917 MGAM2Q2M2H8 2515 aa10.14□□□□□ -0.79
SMG8-201ENST00000300917 Q8NAQ8 132 aa10.14□□□□□ -0.79
SMG8-201ENST00000300917 TEX48A0A1B0GUV7 120 aa10.14□□□□□ -0.79
SMG8-201ENST00000300917 ERG28Q9UKR5 140 aa10.14□□□□□ -0.79
SMG8-201ENST00000300917 LINC00612Q8N6U2 182 aa10.13□□□□□ -0.79
SMG8-201ENST00000300917 TCL1BO95988 128 aa10.13□□□□□ -0.79
SMG8-201ENST00000300917 MIAQ16674 131 aa10.13□□□□□ -0.79
SMG8-201ENST00000300917 IGLV5-39A0A0G2JS06 123 aa10.12□□□□□ -0.79
SMG8-201ENST00000300917 LYRM9A8MSI8 78 aa10.12□□□□□ -0.79
SMG8-201ENST00000300917 NDUFA1O15239 70 aa10.12□□□□□ -0.79
SMG8-201ENST00000300917 IGHV3-33P01772 117 aa10.12□□□□□ -0.79
SMG8-201ENST00000300917 ATP5G1P05496 136 aa10.11□□□□□ -0.79
SMG8-201ENST00000300917 CIRBPQ14011 172 aaKnown RBP10.11□□□□□ -0.79
SMG8-201ENST00000300917 LINC00269Q8N2A0 174 aa10.11□□□□□ -0.79
SMG8-201ENST00000300917 SPART-AS1P0CW21 52 aa10.1□□□□□ -0.79
SMG8-201ENST00000300917 LINC00959A0A1B0GUT2 108 aa10.1□□□□□ -0.79
SMG8-201ENST00000300917 ANGP03950 147 aaKnown RBP10.1□□□□□ -0.79
SMG8-201ENST00000300917 PFN2P35080 140 aa10.1□□□□□ -0.79
SMG8-201ENST00000300917 RNF183Q96D59 192 aa10.1□□□□□ -0.79
SMG8-201ENST00000300917 ANK2Q01484 3957 aa10.1□□□□□ -0.79
SMG8-201ENST00000300917 SOSTDC1Q6X4U4 206 aa10.09□□□□□ -0.79
SMG8-201ENST00000300917 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.08□□□□□ -0.8
SMG8-201ENST00000300917 MIFP14174 115 aa10.08□□□□□ -0.8
SMG8-201ENST00000300917 COX7B2Q8TF08 81 aa10.08□□□□□ -0.8
SMG8-201ENST00000300917 SIGMAR1Q99720 223 aa10.08□□□□□ -0.8
SMG8-201ENST00000300917 B5MCH6 92 aa10.08□□□□□ -0.8
SMG8-201ENST00000300917 LINC00308Q8TCZ7 52 aa10.08□□□□□ -0.8
SMG8-201ENST00000300917 SPANXDQ9BXN6 97 aa10.08□□□□□ -0.8
SMG8-201ENST00000300917 SPANXCQ9NY87 97 aa10.08□□□□□ -0.8
SMG8-201ENST00000300917 IGHV3OR16-9A0A0B4J2B5 98 aa10.07□□□□□ -0.8
SMG8-201ENST00000300917 RPL13AP40429 203 aaKnown RBP10.07□□□□□ -0.8
SMG8-201ENST00000300917 LINC00158P58513 81 aa10.07□□□□□ -0.8
SMG8-201ENST00000300917 C2orf82Q6UX34 121 aa10.07□□□□□ -0.8
SMG8-201ENST00000300917 A0A0B4J2C4 111 aa10.06□□□□□ -0.8
SMG8-201ENST00000300917 F8W1H4 67 aa10.06□□□□□ -0.8
SMG8-201ENST00000300917 H7C423 109 aa10.06□□□□□ -0.8
SMG8-201ENST00000300917 TRIAP1O43715 76 aa10.06□□□□□ -0.8
SMG8-201ENST00000300917 SMCPP49901 116 aaPredicted RBP10.06□□□□□ -0.8
SMG8-201ENST00000300917 PRO0461Q9UI25 63 aa10.06□□□□□ -0.8
SMG8-201ENST00000300917 C6orf226Q5I0X4 101 aa10.05□□□□□ -0.8
SMG8-201ENST00000300917 CLEC2BQ92478 149 aa10.05□□□□□ -0.8
SMG8-201ENST00000300917 C9JAW5 83 aa10.05□□□□□ -0.8
SMG8-201ENST00000300917 MIR7-3HGQ8N6C7 128 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms