RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 HRCT1Q6UXD1 115 aa12.03□□□□□ -0.48
SNAPC4-201ENST00000298532 LINC00959A0A1B0GUT2 108 aa12.03□□□□□ -0.48
SNAPC4-201ENST00000298532 LINC00242Q5T6M2 205 aa12.03□□□□□ -0.48
SNAPC4-201ENST00000298532 C10orf99Q6UWK7 81 aa12.03□□□□□ -0.48
SNAPC4-201ENST00000298532 IGLV2-18A0A075B6J9 118 aa12.02□□□□□ -0.48
SNAPC4-201ENST00000298532 TRAV7A0A075B6U4 112 aa12.02□□□□□ -0.48
SNAPC4-201ENST00000298532 CDC42SE2Q9NRR3 84 aa12.02□□□□□ -0.48
SNAPC4-201ENST00000298532 RPL28P46779 137 aaKnown RBP12.02□□□□□ -0.48
SNAPC4-201ENST00000298532 SERP1Q9Y6X1 66 aa12.01□□□□□ -0.49
SNAPC4-201ENST00000298532 MYO18BQ8IUG5 2567 aa12.01□□□□□ -0.49
SNAPC4-201ENST00000298532 COX17Q14061 63 aa12.01□□□□□ -0.49
SNAPC4-201ENST00000298532 MRGPRG-AS1Q2M3A8 158 aa12□□□□□ -0.49
SNAPC4-201ENST00000298532 C1orf195Q5TG92 126 aa12□□□□□ -0.49
SNAPC4-201ENST00000298532 IGLV1-40P01703 118 aa12□□□□□ -0.49
SNAPC4-201ENST00000298532 MIFP14174 115 aa12□□□□□ -0.49
SNAPC4-201ENST00000298532 NTM-AS1Q6ZSK4 140 aa12□□□□□ -0.49
SNAPC4-201ENST00000298532 SEC61GP60059 68 aa11.99□□□□□ -0.49
SNAPC4-201ENST00000298532 MUC7Q8TAX7 377 aa11.99□□□□□ -0.49
SNAPC4-201ENST00000298532 IGKV2-24A0A0C4DH68 120 aa11.99□□□□□ -0.49
SNAPC4-201ENST00000298532 Q8IZM0 81 aa11.99□□□□□ -0.49
SNAPC4-201ENST00000298532 CDIP1Q9H305 208 aa11.99□□□□□ -0.49
SNAPC4-201ENST00000298532 SMIM1B2RUZ4 78 aa11.99□□□□□ -0.49
SNAPC4-201ENST00000298532 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.99□□□□□ -0.49
SNAPC4-201ENST00000298532 A0A087WVE0 104 aa11.99□□□□□ -0.49
SNAPC4-201ENST00000298532 WFDC10BQ8IUB3 73 aa11.99□□□□□ -0.49
SNAPC4-201ENST00000298532 M0R378 163 aa11.98□□□□□ -0.49
SNAPC4-201ENST00000298532 CDSNQ15517 529 aa11.98□□□□□ -0.49
SNAPC4-201ENST00000298532 ADAMTSL4-AS1Q5T5F5 129 aa11.98□□□□□ -0.49
SNAPC4-201ENST00000298532 FAM19A1Q7Z5A9 133 aa11.98□□□□□ -0.49
SNAPC4-201ENST00000298532 SYCNQ0VAF6 134 aa11.97□□□□□ -0.49
SNAPC4-201ENST00000298532 BBC3Q96PG8 261 aaPredicted RBP11.97□□□□□ -0.49
SNAPC4-201ENST00000298532 LOC100131303A0A0U1RQF7 123 aa11.96□□□□□ -0.49
SNAPC4-201ENST00000298532 FAM19A5Q7Z5A7 132 aaPredicted RBP11.96□□□□□ -0.49
SNAPC4-201ENST00000298532 LINC01006Q8NI28 216 aa11.96□□□□□ -0.49
SNAPC4-201ENST00000298532 AMELXQ99217 191 aa11.96□□□□□ -0.49
SNAPC4-201ENST00000298532 MYO9AB2RTY4 2548 aa11.96□□□□□ -0.5
SNAPC4-201ENST00000298532 PRM2P04554 102 aa11.96□□□□□ -0.5
SNAPC4-201ENST00000298532 DHRS4-AS1Q9P1J3 65 aa11.96□□□□□ -0.5
SNAPC4-201ENST00000298532 ZNF73O43830 326 aaPredicted RBP11.95□□□□□ -0.5
SNAPC4-201ENST00000298532 C14orf177Q52M58 125 aa11.95□□□□□ -0.5
SNAPC4-201ENST00000298532 CCDC168Q8NDH2 2452 aa11.95□□□□□ -0.5
SNAPC4-201ENST00000298532 ZNF702PQ9H963 129 aa11.94□□□□□ -0.5
SNAPC4-201ENST00000298532 CHCHD7Q9BUK0 85 aa11.94□□□□□ -0.5
SNAPC4-201ENST00000298532 A0A096LNI7 61 aa11.94□□□□□ -0.5
SNAPC4-201ENST00000298532 C11orf45Q8TAV5 145 aa11.94□□□□□ -0.5
SNAPC4-201ENST00000298532 Q8N814 137 aa11.93□□□□□ -0.5
SNAPC4-201ENST00000298532 TLN1Q9Y490 2541 aaKnown RBP11.93□□□□□ -0.5
SNAPC4-201ENST00000298532 KRTAP10-9P60411 292 aa11.92□□□□□ -0.5
SNAPC4-201ENST00000298532 PRR4Q16378 134 aa11.92□□□□□ -0.5
SNAPC4-201ENST00000298532 A6NED7 52 aa11.92□□□□□ -0.5
SNAPC4-201ENST00000298532 ZNF580Q9UK33 172 aa11.92□□□□□ -0.5
SNAPC4-201ENST00000298532 WFDC13Q8IUB5 93 aa11.92□□□□□ -0.5
SNAPC4-201ENST00000298532 A0A087WYN8 130 aa11.92□□□□□ -0.5
SNAPC4-201ENST00000298532 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.92□□□□□ -0.5
SNAPC4-201ENST00000298532 IGKV2-28A0A075B6P5 120 aa11.91□□□□□ -0.5
SNAPC4-201ENST00000298532 IGKV2D-28P01615 120 aa11.91□□□□□ -0.5
SNAPC4-201ENST00000298532 TRBV7-7A0A0K0K1E9 115 aa11.91□□□□□ -0.5
SNAPC4-201ENST00000298532 C4orf48Q5BLP8 95 aa11.91□□□□□ -0.5
SNAPC4-201ENST00000298532 COX6A2Q02221 97 aa11.9□□□□□ -0.5
SNAPC4-201ENST00000298532 LELP1Q5T871 98 aa11.89□□□□□ -0.51
SNAPC4-201ENST00000298532 A0A087WZ39 114 aa11.88□□□□□ -0.51
SNAPC4-201ENST00000298532 CSDC2Q9Y534 153 aaKnown RBP11.88□□□□□ -0.51
SNAPC4-201ENST00000298532 CASC2Q6XLA1 102 aa11.87□□□□□ -0.51
SNAPC4-201ENST00000298532 FAM30AQ9NZY2 134 aa11.87□□□□□ -0.51
SNAPC4-201ENST00000298532 DEFB131BA0A096LNP1 70 aa11.87□□□□□ -0.51
SNAPC4-201ENST00000298532 LINC01546A6NGU7 62 aa11.87□□□□□ -0.51
SNAPC4-201ENST00000298532 PRR15LQ9BU68 103 aa11.87□□□□□ -0.51
SNAPC4-201ENST00000298532 CYSRT1A8MQ03 144 aa11.86□□□□□ -0.51
SNAPC4-201ENST00000298532 COL4A2P08572 1712 aa11.86□□□□□ -0.51
SNAPC4-201ENST00000298532 LINC00482Q8N8I6 264 aa11.86□□□□□ -0.51
SNAPC4-201ENST00000298532 HIVEP3Q5T1R4 2406 aa11.86□□□□□ -0.51
SNAPC4-201ENST00000298532 Q8N3U1 123 aa11.85□□□□□ -0.51
SNAPC4-201ENST00000298532 SOSTDC1Q6X4U4 206 aa11.85□□□□□ -0.51
SNAPC4-201ENST00000298532 CELA1Q9UNI1 258 aa11.85□□□□□ -0.51
SNAPC4-201ENST00000298532 C18orf65Q6ZTR6 163 aa11.84□□□□□ -0.51
SNAPC4-201ENST00000298532 KIR2DL5BQ8NHK3 375 aa11.84□□□□□ -0.51
SNAPC4-201ENST00000298532 LOC107984640A0A0U1RRK4 108 aa11.84□□□□□ -0.51
SNAPC4-201ENST00000298532 CPAMD8Q8IZJ3 1885 aa11.83□□□□□ -0.51
SNAPC4-201ENST00000298532 EDN2P20800 178 aa11.83□□□□□ -0.52
SNAPC4-201ENST00000298532 SMCPP49901 116 aaPredicted RBP11.83□□□□□ -0.52
SNAPC4-201ENST00000298532 WFDC10AQ9H1F0 79 aa11.83□□□□□ -0.52
SNAPC4-201ENST00000298532 AGRNO00468 2067 aa11.83□□□□□ -0.52
SNAPC4-201ENST00000298532 PIEZO2Q9H5I5 2752 aa11.83□□□□□ -0.52
SNAPC4-201ENST00000298532 PRYO14603 147 aa11.83□□□□□ -0.52
SNAPC4-201ENST00000298532 LINC00846Q9NV44 126 aa11.83□□□□□ -0.52
SNAPC4-201ENST00000298532 Q8N9L7 120 aa11.83□□□□□ -0.52
SNAPC4-201ENST00000298532 C16orf95Q9H693 158 aa11.83□□□□□ -0.52
SNAPC4-201ENST00000298532 PRO0461Q9UI25 63 aa11.83□□□□□ -0.52
SNAPC4-201ENST00000298532 A0A0J9YWU9 116 aa11.82□□□□□ -0.52
SNAPC4-201ENST00000298532 UNQ6190/PRO20217Q6UXQ8 127 aa11.82□□□□□ -0.52
SNAPC4-201ENST00000298532 PRRC2AP48634 2157 aaKnown RBP11.82□□□□□ -0.52
SNAPC4-201ENST00000298532 BRI3O95415 125 aa11.81□□□□□ -0.52
SNAPC4-201ENST00000298532 PPDPFQ9H3Y8 114 aa11.81□□□□□ -0.52
SNAPC4-201ENST00000298532 ODF3L2Q3SX64 289 aa11.81□□□□□ -0.52
SNAPC4-201ENST00000298532 TRBV10-3A0A0K0K1G6 114 aa11.8□□□□□ -0.52
SNAPC4-201ENST00000298532 IGLV4-60A0A075B6I1 120 aa11.79□□□□□ -0.52
SNAPC4-201ENST00000298532 PRR3P79522 188 aaKnown RBP11.79□□□□□ -0.52
SNAPC4-201ENST00000298532 KIF25-AS1Q9Y6Z4 181 aa11.79□□□□□ -0.52
SNAPC4-201ENST00000298532 BEAN1Q3B7T3 259 aa11.78□□□□□ -0.52
SNAPC4-201ENST00000298532 AVPP01185 164 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms