RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 BVES-AS1Q5T3Y7 98 aa15.64■□□□□ 0.09
PTX3-201ENST00000295927 HSD52Q0P140 79 aa15.64■□□□□ 0.09
PTX3-201ENST00000295927 CLPSL2Q6UWE3 100 aa15.64■□□□□ 0.09
PTX3-201ENST00000295927 COL7A1Q02388 2944 aa15.64■□□□□ 0.09
PTX3-201ENST00000295927 LINC00269Q8N2A0 174 aa15.63■□□□□ 0.09
PTX3-201ENST00000295927 ANGP03950 147 aaKnown RBP15.62■□□□□ 0.09
PTX3-201ENST00000295927 ESRGQ1W209 222 aa15.62■□□□□ 0.09
PTX3-201ENST00000295927 SCGB1D4Q6XE38 83 aa15.62■□□□□ 0.09
PTX3-201ENST00000295927 SMIM1B2RUZ4 78 aa15.61■□□□□ 0.09
PTX3-201ENST00000295927 IGLV5-39A0A0G2JS06 123 aa15.6■□□□□ 0.09
PTX3-201ENST00000295927 SS18Q15532 418 aa15.6■□□□□ 0.09
PTX3-201ENST00000295927 IGHV3OR16-9A0A0B4J2B5 98 aa15.59■□□□□ 0.09
PTX3-201ENST00000295927 REG3AQ06141 175 aa15.58■□□□□ 0.09
PTX3-201ENST00000295927 WFDC10BQ8IUB3 73 aa15.58■□□□□ 0.09
PTX3-201ENST00000295927 C15orf53Q8NAA6 179 aa15.58■□□□□ 0.09
PTX3-201ENST00000295927 CCL25O15444 150 aa15.58■□□□□ 0.08
PTX3-201ENST00000295927 COL5A1-AS1Q5SY13 56 aa15.57■□□□□ 0.08
PTX3-201ENST00000295927 XCL1P47992 114 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 ZFAND6Q6FIF0 208 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 NDUFA12Q9UI09 145 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 IGHV3-30P01768 117 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 IGHV3-33P01772 117 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 NHLRC4P0CG21 123 aaPredicted RBP15.56■□□□□ 0.08
PTX3-201ENST00000295927 IGHV3-30-5P0DP03 117 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 C10orf126Q8N4M7 172 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 TAL2Q16559 108 aa15.55■□□□□ 0.08
PTX3-201ENST00000295927 ORAOV1Q8WV07 137 aa15.55■□□□□ 0.08
PTX3-201ENST00000295927 HIST1H4GQ99525 98 aa15.55■□□□□ 0.08
PTX3-201ENST00000295927 KLK12Q9UKR0 248 aa15.55■□□□□ 0.08
PTX3-201ENST00000295927 C5orf38Q86SI9 138 aa15.55■□□□□ 0.08
PTX3-201ENST00000295927 A0A087WZ39 114 aa15.54■□□□□ 0.08
PTX3-201ENST00000295927 GCSHP23434 173 aa15.54■□□□□ 0.08
PTX3-201ENST00000295927 STAB2Q8WWQ8 2551 aa15.54■□□□□ 0.08
PTX3-201ENST00000295927 IGLL5B9A064 214 aa15.53■□□□□ 0.08
PTX3-201ENST00000295927 CEND1Q8N111 149 aa15.53■□□□□ 0.08
PTX3-201ENST00000295927 A0A0J9YXY3 114 aa15.53■□□□□ 0.08
PTX3-201ENST00000295927 PRR34Q9NV39 138 aa15.53■□□□□ 0.08
PTX3-201ENST00000295927 IGLV10-54A0A075B6I4 117 aa15.52■□□□□ 0.07
PTX3-201ENST00000295927 CHCHD10Q8WYQ3 142 aaPredicted RBP15.52■□□□□ 0.07
PTX3-201ENST00000295927 TM2D2Q9BX73 214 aa15.51■□□□□ 0.07
PTX3-201ENST00000295927 NDUFA1O15239 70 aa15.51■□□□□ 0.07
PTX3-201ENST00000295927 FXYD2P54710 66 aa15.51■□□□□ 0.07
PTX3-201ENST00000295927 SRSF9Q13242 221 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTX3-201ENST00000295927 CD164L2Q6UWJ8 174 aa15.5■□□□□ 0.07
PTX3-201ENST00000295927 ENHOQ6UWT2 76 aa15.5■□□□□ 0.07
PTX3-201ENST00000295927 SPANXB1Q9NS25 103 aaPredicted RBP15.5■□□□□ 0.07
PTX3-201ENST00000295927 K7EP13 123 aa15.49■□□□□ 0.07
PTX3-201ENST00000295927 A0A1B0GV90 55 aa15.48■□□□□ 0.07
PTX3-201ENST00000295927 COX7B2Q8TF08 81 aa15.48■□□□□ 0.07
PTX3-201ENST00000295927 Q9H8V8 135 aa15.48■□□□□ 0.07
PTX3-201ENST00000295927 MEGF8Q7Z7M0 2845 aa15.47■□□□□ 0.07
PTX3-201ENST00000295927 PTTG1IPP53801 180 aa15.47■□□□□ 0.07
PTX3-201ENST00000295927 TOMM7Q9P0U1 55 aa15.47■□□□□ 0.07
PTX3-201ENST00000295927 LINC00588Q9Y4M8 146 aa15.47■□□□□ 0.07
PTX3-201ENST00000295927 A6NDN8 102 aa15.46■□□□□ 0.07
PTX3-201ENST00000295927 LINC01556Q5JQF7 62 aa15.46■□□□□ 0.07
PTX3-201ENST00000295927 LINC01561Q8N1V8 128 aa15.46■□□□□ 0.07
PTX3-201ENST00000295927 UBE2WQ96B02 151 aa15.46■□□□□ 0.07
PTX3-201ENST00000295927 PRKDCP78527 4128 aaKnown RBP15.46■□□□□ 0.07
PTX3-201ENST00000295927 CRPP02741 224 aa15.45■□□□□ 0.06
PTX3-201ENST00000295927 ZNF625Q96I27 306 aaPredicted RBP15.45■□□□□ 0.06
PTX3-201ENST00000295927 TMEM238C9JI98 176 aa15.45■□□□□ 0.06
PTX3-201ENST00000295927 COX7A2LO14548 114 aa15.45■□□□□ 0.06
PTX3-201ENST00000295927 FOXI1Q12951 378 aa15.45■□□□□ 0.06
PTX3-201ENST00000295927 LITAFQ99732 161 aa15.45■□□□□ 0.06
PTX3-201ENST00000295927 CCL18P55774 89 aa15.43■□□□□ 0.06
PTX3-201ENST00000295927 GAGE12HA6NDE8 117 aa15.43■□□□□ 0.06
PTX3-201ENST00000295927 TRAV8-4A0A0B4J246 113 aa15.41■□□□□ 0.06
PTX3-201ENST00000295927 TAX1BP3O14907 124 aa15.41■□□□□ 0.06
PTX3-201ENST00000295927 DNAH10OSP0CZ25 163 aa15.41■□□□□ 0.06
PTX3-201ENST00000295927 ADAMTSL4-AS1Q5T5F5 129 aa15.41■□□□□ 0.06
PTX3-201ENST00000295927 Q6ZVH6 145 aa15.41■□□□□ 0.06
PTX3-201ENST00000295927 TIMM17BO60830 172 aa15.4■□□□□ 0.06
PTX3-201ENST00000295927 HERV-K104P63124 156 aa15.4■□□□□ 0.06
PTX3-201ENST00000295927 MIAQ16674 131 aa15.4■□□□□ 0.06
PTX3-201ENST00000295927 NHP2Q9NX24 153 aaKnown RBP15.4■□□□□ 0.06
PTX3-201ENST00000295927 MALP21145 153 aa15.39■□□□□ 0.05
PTX3-201ENST00000295927 SPANXDQ9BXN6 97 aa15.38■□□□□ 0.05
PTX3-201ENST00000295927 SPANXCQ9NY87 97 aa15.38■□□□□ 0.05
PTX3-201ENST00000295927 SMIM13P0DJ93 91 aa15.37■□□□□ 0.05
PTX3-201ENST00000295927 C6orf226Q5I0X4 101 aa15.37■□□□□ 0.05
PTX3-201ENST00000295927 Q8IZM0 81 aa15.37■□□□□ 0.05
PTX3-201ENST00000295927 K7ERJ3 54 aa15.37■□□□□ 0.05
PTX3-201ENST00000295927 CIRBPQ14011 172 aaKnown RBP15.37■□□□□ 0.05
PTX3-201ENST00000295927 MUSTN1Q8IVN3 82 aa15.37■□□□□ 0.05
PTX3-201ENST00000295927 APLNQ9ULZ1 77 aa15.37■□□□□ 0.05
PTX3-201ENST00000295927 PRSS2P07478 247 aa15.36■□□□□ 0.05
PTX3-201ENST00000295927 TMEM238LA0A1B0GVL6 79 aa15.35■□□□□ 0.05
PTX3-201ENST00000295927 A6NJY4 79 aa15.35■□□□□ 0.05
PTX3-201ENST00000295927 MEIG1Q5JSS6 88 aa15.35■□□□□ 0.05
PTX3-201ENST00000295927 UPK3BQ9BT76 320 aa15.35■□□□□ 0.05
PTX3-201ENST00000295927 COX11Q9Y6N1 276 aa15.35■□□□□ 0.05
PTX3-201ENST00000295927 DYNC2H1Q8NCM8 4307 aaKnown RBP15.35■□□□□ 0.05
PTX3-201ENST00000295927 RAB37Q96AX2 223 aa15.35■□□□□ 0.05
PTX3-201ENST00000295927 KIAA0087Q14695 138 aa15.34■□□□□ 0.05
PTX3-201ENST00000295927 KRTAP26-1Q6PEX3 210 aa15.34■□□□□ 0.05
PTX3-201ENST00000295927 A0A0U1RRA0 63 aa15.33■□□□□ 0.05
PTX3-201ENST00000295927 A0A1B0GWB2 263 aa15.33■□□□□ 0.05
PTX3-201ENST00000295927 DAND5Q8N907 189 aa15.33■□□□□ 0.05
PTX3-201ENST00000295927 APOMO95445 188 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms