RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 ITPR3Q14573 2671 aa12□□□□□ -0.49
CHRNE-201ENST00000293780 CCL24O00175 119 aa11.99□□□□□ -0.49
CHRNE-201ENST00000293780 SETXQ7Z333 2677 aaKnown RBP11.99□□□□□ -0.49
CHRNE-201ENST00000293780 CDC42SE2Q9NRR3 84 aa11.99□□□□□ -0.49
CHRNE-201ENST00000293780 CCDC168Q8NDH2 2452 aa11.99□□□□□ -0.49
CHRNE-201ENST00000293780 TRAV25A0A0B4J276 109 aa11.98□□□□□ -0.49
CHRNE-201ENST00000293780 DNAJC9-AS1A6NH13 148 aa11.98□□□□□ -0.49
CHRNE-201ENST00000293780 WFDC10AQ9H1F0 79 aa11.98□□□□□ -0.49
CHRNE-201ENST00000293780 H3BT86 120 aa11.98□□□□□ -0.49
CHRNE-201ENST00000293780 DAZ2Q13117 558 aaKnown RBP11.98□□□□□ -0.49
CHRNE-201ENST00000293780 FAM19A3Q7Z5A8 133 aa11.98□□□□□ -0.49
CHRNE-201ENST00000293780 DAZ4Q86SG3 579 aaKnown RBP11.98□□□□□ -0.49
CHRNE-201ENST00000293780 DAZ3Q9NR90 486 aaKnown RBP11.98□□□□□ -0.49
CHRNE-201ENST00000293780 LOC100131303A0A0U1RQF7 123 aa11.97□□□□□ -0.49
CHRNE-201ENST00000293780 ESM1Q9NQ30 184 aa11.97□□□□□ -0.49
CHRNE-201ENST00000293780 TRBV10-1A0A0K0K1A3 114 aa11.97□□□□□ -0.49
CHRNE-201ENST00000293780 F5H768 121 aa11.97□□□□□ -0.49
CHRNE-201ENST00000293780 GIG44P09565 113 aaPredicted RBP11.97□□□□□ -0.49
CHRNE-201ENST00000293780 MEIG1Q5JSS6 88 aa11.97□□□□□ -0.49
CHRNE-201ENST00000293780 PRIMA1Q86XR5 153 aa11.97□□□□□ -0.49
CHRNE-201ENST00000293780 CSDC2Q9Y534 153 aaKnown RBP11.97□□□□□ -0.49
CHRNE-201ENST00000293780 LRRC75A-AS1Q8N1F1 130 aa11.96□□□□□ -0.49
CHRNE-201ENST00000293780 TMEM86BQ8N661 226 aa11.94□□□□□ -0.5
CHRNE-201ENST00000293780 WFDC11Q8NEX6 87 aa11.94□□□□□ -0.5
CHRNE-201ENST00000293780 RPL35AP18077 110 aaKnown RBP11.94□□□□□ -0.5
CHRNE-201ENST00000293780 PLAC8L1A1L4L8 177 aa11.93□□□□□ -0.5
CHRNE-201ENST00000293780 FLNAP21333 2647 aaKnown RBP11.93□□□□□ -0.5
CHRNE-201ENST00000293780 UBE2L6O14933 153 aa11.92□□□□□ -0.5
CHRNE-201ENST00000293780 MRPL23Q16540 153 aaKnown RBP11.92□□□□□ -0.5
CHRNE-201ENST00000293780 FASNP49327 2511 aaKnown RBP11.92□□□□□ -0.5
CHRNE-201ENST00000293780 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
CHRNE-201ENST00000293780 SMIM20Q8N5G0 67 aa11.92□□□□□ -0.5
CHRNE-201ENST00000293780 TMEM243Q9BU79 118 aa11.92□□□□□ -0.5
CHRNE-201ENST00000293780 IGKV3OR2-268A0A0C4DH90 116 aa11.91□□□□□ -0.5
CHRNE-201ENST00000293780 HECTD1Q9ULT8 2610 aa11.91□□□□□ -0.5
CHRNE-201ENST00000293780 COX7A2LO14548 114 aa11.91□□□□□ -0.5
CHRNE-201ENST00000293780 SHISA2Q6UWI4 295 aa11.91□□□□□ -0.5
CHRNE-201ENST00000293780 FAM240AA0A1B0GVK7 77 aa11.9□□□□□ -0.5
CHRNE-201ENST00000293780 ANK3Q12955 4377 aaKnown RBP11.9□□□□□ -0.5
CHRNE-201ENST00000293780 DEFB121Q5J5C9 76 aa11.89□□□□□ -0.51
CHRNE-201ENST00000293780 UNC79Q9P2D8 2635 aa11.89□□□□□ -0.51
CHRNE-201ENST00000293780 CHCHD5Q9BSY4 110 aa11.89□□□□□ -0.51
CHRNE-201ENST00000293780 FAM110AQ9BQ89 295 aa11.88□□□□□ -0.51
CHRNE-201ENST00000293780 ACANP16112 2415 aa11.88□□□□□ -0.51
CHRNE-201ENST00000293780 ITPR2Q14571 2701 aa11.88□□□□□ -0.51
CHRNE-201ENST00000293780 HERV-K104P63124 156 aa11.87□□□□□ -0.51
CHRNE-201ENST00000293780 C16orf74Q96GX8 76 aa11.87□□□□□ -0.51
CHRNE-201ENST00000293780 PDZD2O15018 2839 aa11.87□□□□□ -0.51
CHRNE-201ENST00000293780 FAM218AQ96MZ4 157 aa11.87□□□□□ -0.51
CHRNE-201ENST00000293780 C19orf73Q9NVV2 129 aa11.87□□□□□ -0.51
CHRNE-201ENST00000293780 TOMM7Q9P0U1 55 aa11.87□□□□□ -0.51
CHRNE-201ENST00000293780 IGLV4-60A0A075B6I1 120 aa11.86□□□□□ -0.51
CHRNE-201ENST00000293780 LINC01006Q8NI28 216 aa11.86□□□□□ -0.51
CHRNE-201ENST00000293780 COPS9Q8WXC6 57 aa11.86□□□□□ -0.51
CHRNE-201ENST00000293780 TRGV4A0A0C4DH28 118 aa11.86□□□□□ -0.51
CHRNE-201ENST00000293780 CSNK1G2-AS1Q8NCQ2 148 aa11.86□□□□□ -0.51
CHRNE-201ENST00000293780 MTORP42345 2549 aa11.86□□□□□ -0.51
CHRNE-201ENST00000293780 TRBV7-7A0A0K0K1E9 115 aa11.85□□□□□ -0.51
CHRNE-201ENST00000293780 COX7B2Q8TF08 81 aa11.85□□□□□ -0.51
CHRNE-201ENST00000293780 TRBV6-4A0A1B0GX49 114 aa11.84□□□□□ -0.51
CHRNE-201ENST00000293780 MIR7-3HGQ8N6C7 128 aa11.84□□□□□ -0.51
CHRNE-201ENST00000293780 FHL2Q14192 279 aa11.83□□□□□ -0.52
CHRNE-201ENST00000293780 C3orf56Q8N813 242 aa11.83□□□□□ -0.52
CHRNE-201ENST00000293780 OVOL2Q9BRP0 275 aa11.83□□□□□ -0.52
CHRNE-201ENST00000293780 IGLV1-51P01701 117 aa11.82□□□□□ -0.52
CHRNE-201ENST00000293780 BAALC-AS2P0C853 105 aa11.82□□□□□ -0.52
CHRNE-201ENST00000293780 LINC00337Q8N6G1 96 aa11.82□□□□□ -0.52
CHRNE-201ENST00000293780 C22orf24Q9Y442 160 aa11.82□□□□□ -0.52
CHRNE-201ENST00000293780 FN1P02751 2386 aaKnown RBP11.81□□□□□ -0.52
CHRNE-201ENST00000293780 IGKV2-28A0A075B6P5 120 aa11.81□□□□□ -0.52
CHRNE-201ENST00000293780 IGKV2D-28P01615 120 aa11.81□□□□□ -0.52
CHRNE-201ENST00000293780 TRBV6-8A0A0A6YYG3 113 aa11.81□□□□□ -0.52
CHRNE-201ENST00000293780 Q9HAA7 133 aa11.81□□□□□ -0.52
CHRNE-201ENST00000293780 FAM236AA0A1B0GUQ0 79 aa11.8□□□□□ -0.52
CHRNE-201ENST00000293780 FAM236BA0A1B0GV22 79 aa11.8□□□□□ -0.52
CHRNE-201ENST00000293780 CMC4P56277 68 aaPredicted RBP11.8□□□□□ -0.52
CHRNE-201ENST00000293780 TRACP01848 142 aa11.8□□□□□ -0.52
CHRNE-201ENST00000293780 LINC00158P58513 81 aa11.8□□□□□ -0.52
CHRNE-201ENST00000293780 C5orf38Q86SI9 138 aa11.8□□□□□ -0.52
CHRNE-201ENST00000293780 SND1-IT1Q9HBX3 110 aa11.8□□□□□ -0.52
CHRNE-201ENST00000293780 IGHV3OR16-9A0A0B4J2B5 98 aa11.79□□□□□ -0.52
CHRNE-201ENST00000293780 ACYP1P07311 99 aa11.79□□□□□ -0.52
CHRNE-201ENST00000293780 KRTAP1-1Q07627 177 aa11.78□□□□□ -0.52
CHRNE-201ENST00000293780 TRAV13-2A0A0B4J235 113 aa11.78□□□□□ -0.52
CHRNE-201ENST00000293780 CRPP02741 224 aa11.78□□□□□ -0.52
CHRNE-201ENST00000293780 DEFB130BP0DP73 79 aa11.78□□□□□ -0.52
CHRNE-201ENST00000293780 DEFB130AP0DP74 79 aa11.78□□□□□ -0.52
CHRNE-201ENST00000293780 RPL28P46779 137 aaKnown RBP11.77□□□□□ -0.53
CHRNE-201ENST00000293780 SMCR5Q8TEV8 140 aa11.77□□□□□ -0.53
CHRNE-201ENST00000293780 PFN2P35080 140 aa11.77□□□□□ -0.53
CHRNE-201ENST00000293780 CCL18P55774 89 aa11.77□□□□□ -0.53
CHRNE-201ENST00000293780 IMUPQ9GZP8 106 aa11.77□□□□□ -0.53
CHRNE-201ENST00000293780 C16orf95Q9H693 158 aa11.77□□□□□ -0.53
CHRNE-201ENST00000293780 TMEM126AQ9H061 195 aa11.76□□□□□ -0.53
CHRNE-201ENST00000293780 PPDPFQ9H3Y8 114 aa11.76□□□□□ -0.53
CHRNE-201ENST00000293780 RNASE1P07998 156 aaKnown RBP11.76□□□□□ -0.53
CHRNE-201ENST00000293780 C11orf68Q9H3H3 251 aaKnown RBP11.76□□□□□ -0.53
CHRNE-201ENST00000293780 SMIM11BQ8TCY0 68 aa11.75□□□□□ -0.53
CHRNE-201ENST00000293780 NBEAL2Q6ZNJ1 2754 aa11.75□□□□□ -0.53
CHRNE-201ENST00000293780 A0A087WZ39 114 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms