RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 A0A0J9YWU9 116 aa14.55□□□□□ -0.08
YBX3-202ENST00000279550 H3BUT2 72 aa14.55□□□□□ -0.08
YBX3-202ENST00000279550 SRSF9Q13242 221 aaKnown RBP eCLIP14.55□□□□□ -0.08
YBX3-202ENST00000279550 SPANXB1Q9NS25 103 aaPredicted RBP14.55□□□□□ -0.08
YBX3-202ENST00000279550 UBE2V1Q13404 147 aa14.55□□□□□ -0.08
YBX3-202ENST00000279550 C12orf74Q32Q52 190 aa14.55□□□□□ -0.08
YBX3-202ENST00000279550 HERVK_113P63121 156 aa14.54□□□□□ -0.08
YBX3-202ENST00000279550 A0A0J9YXY3 114 aa14.53□□□□□ -0.08
YBX3-202ENST00000279550 ATP5G1P05496 136 aa14.53□□□□□ -0.08
YBX3-202ENST00000279550 A0A1B0GWB2 263 aa14.52□□□□□ -0.08
YBX3-202ENST00000279550 IGHV3-30P01768 117 aa14.52□□□□□ -0.09
YBX3-202ENST00000279550 IGHV3-30-5P0DP03 117 aa14.52□□□□□ -0.09
YBX3-202ENST00000279550 NDUFA12Q9UI09 145 aa14.52□□□□□ -0.09
YBX3-202ENST00000279550 TENM3Q9P273 2699 aa14.51□□□□□ -0.09
YBX3-202ENST00000279550 TRAV26-1A0A087WT03 109 aa14.5□□□□□ -0.09
YBX3-202ENST00000279550 IGLV5-39A0A0G2JS06 123 aa14.5□□□□□ -0.09
YBX3-202ENST00000279550 F5H768 121 aa14.5□□□□□ -0.09
YBX3-202ENST00000279550 HTN3P15516 51 aa14.5□□□□□ -0.09
YBX3-202ENST00000279550 SMIM1B2RUZ4 78 aa14.49□□□□□ -0.09
YBX3-202ENST00000279550 ZFAND6Q6FIF0 208 aa14.49□□□□□ -0.09
YBX3-202ENST00000279550 HUWE1Q7Z6Z7 4374 aaKnown RBP14.49□□□□□ -0.09
YBX3-202ENST00000279550 LITAFQ99732 161 aa14.49□□□□□ -0.09
YBX3-202ENST00000279550 IGKV3OR2-268A0A0C4DH90 116 aa14.48□□□□□ -0.09
YBX3-202ENST00000279550 A0A1W2PPM0 123 aa14.48□□□□□ -0.09
YBX3-202ENST00000279550 IGLL5B9A064 214 aa14.47□□□□□ -0.09
YBX3-202ENST00000279550 C11orf45Q8TAV5 145 aa14.47□□□□□ -0.09
YBX3-202ENST00000279550 RBX1P62877 108 aa14.46□□□□□ -0.1
YBX3-202ENST00000279550 Q6ZTC4 211 aa14.46□□□□□ -0.1
YBX3-202ENST00000279550 TMEM262E9PQX1 116 aa14.44□□□□□ -0.1
YBX3-202ENST00000279550 NDUFA1O15239 70 aa14.44□□□□□ -0.1
YBX3-202ENST00000279550 NANOS2P60321 138 aaKnown RBP14.44□□□□□ -0.1
YBX3-202ENST00000279550 ADAMTSL4-AS1Q5T5F5 129 aa14.44□□□□□ -0.1
YBX3-202ENST00000279550 MEGF8Q7Z7M0 2845 aa14.44□□□□□ -0.1
YBX3-202ENST00000279550 TMEM238LA0A1B0GVL6 79 aa14.44□□□□□ -0.1
YBX3-202ENST00000279550 A6NJY4 79 aa14.44□□□□□ -0.1
YBX3-202ENST00000279550 TMEM238C9JI98 176 aa14.44□□□□□ -0.1
YBX3-202ENST00000279550 DNAH9Q9NYC9 4486 aa14.43□□□□□ -0.1
YBX3-202ENST00000279550 NHLRC4P0CG21 123 aaPredicted RBP14.43□□□□□ -0.1
YBX3-202ENST00000279550 MUSTN1Q8IVN3 82 aa14.43□□□□□ -0.1
YBX3-202ENST00000279550 K7EP34 96 aa14.42□□□□□ -0.1
YBX3-202ENST00000279550 A0A1B0GUV1 79 aa14.41□□□□□ -0.1
YBX3-202ENST00000279550 GAGE10A6NGK3 116 aa14.41□□□□□ -0.1
YBX3-202ENST00000279550 EIF4EBP3O60516 100 aaPredicted RBP14.41□□□□□ -0.1
YBX3-202ENST00000279550 APOMO95445 188 aa14.41□□□□□ -0.1
YBX3-202ENST00000279550 Q8N3U1 123 aa14.41□□□□□ -0.1
YBX3-202ENST00000279550 LINC00959A0A1B0GUT2 108 aa14.41□□□□□ -0.1
YBX3-202ENST00000279550 CFC1BP0CG36 223 aa14.41□□□□□ -0.1
YBX3-202ENST00000279550 CFC1P0CG37 223 aa14.41□□□□□ -0.1
YBX3-202ENST00000279550 COL7A1Q02388 2944 aa14.4□□□□□ -0.1
YBX3-202ENST00000279550 A4D1N5 150 aa14.4□□□□□ -0.1
YBX3-202ENST00000279550 FABP2P12104 132 aa14.4□□□□□ -0.1
YBX3-202ENST00000279550 MRPL23Q16540 153 aaKnown RBP14.4□□□□□ -0.1
YBX3-202ENST00000279550 Q9H8V8 135 aa14.4□□□□□ -0.1
YBX3-202ENST00000279550 SPCS1Q9Y6A9 102 aa14.4□□□□□ -0.1
YBX3-202ENST00000279550 ICOSQ9Y6W8 199 aa14.4□□□□□ -0.1
YBX3-202ENST00000279550 SPANXDQ9BXN6 97 aa14.39□□□□□ -0.11
YBX3-202ENST00000279550 SPANXCQ9NY87 97 aa14.39□□□□□ -0.11
YBX3-202ENST00000279550 PRKDCP78527 4128 aaKnown RBP14.38□□□□□ -0.11
YBX3-202ENST00000279550 IGHV3OR16-9A0A0B4J2B5 98 aa14.38□□□□□ -0.11
YBX3-202ENST00000279550 CLPSL2Q6UWE3 100 aa14.38□□□□□ -0.11
YBX3-202ENST00000279550 PGPEP1Q9NXJ5 209 aa14.38□□□□□ -0.11
YBX3-202ENST00000279550 ZNF625Q96I27 306 aaPredicted RBP14.38□□□□□ -0.11
YBX3-202ENST00000279550 TIMM17BO60830 172 aa14.37□□□□□ -0.11
YBX3-202ENST00000279550 MIAQ16674 131 aa14.37□□□□□ -0.11
YBX3-202ENST00000279550 DEFB131BA0A096LNP1 70 aa14.36□□□□□ -0.11
YBX3-202ENST00000279550 TSPAN13O95857 204 aa14.36□□□□□ -0.11
YBX3-202ENST00000279550 GTF2H5Q6ZYL4 71 aa14.36□□□□□ -0.11
YBX3-202ENST00000279550 RPL24P83731 157 aaKnown RBP14.35□□□□□ -0.11
YBX3-202ENST00000279550 C5orf38Q86SI9 138 aa14.35□□□□□ -0.11
YBX3-202ENST00000279550 DAND5Q8N907 189 aa14.35□□□□□ -0.11
YBX3-202ENST00000279550 PRSS2P07478 247 aa14.34□□□□□ -0.11
YBX3-202ENST00000279550 NPC2P61916 151 aa14.34□□□□□ -0.11
YBX3-202ENST00000279550 COX7B2Q8TF08 81 aa14.34□□□□□ -0.11
YBX3-202ENST00000279550 A0A087WZ39 114 aa14.33□□□□□ -0.12
YBX3-202ENST00000279550 H3BNG1 76 aa14.33□□□□□ -0.12
YBX3-202ENST00000279550 LELP1Q5T871 98 aa14.33□□□□□ -0.12
YBX3-202ENST00000279550 LINC00269Q8N2A0 174 aa14.33□□□□□ -0.12
YBX3-202ENST00000279550 TRAV10A0A0B4J240 114 aa14.32□□□□□ -0.12
YBX3-202ENST00000279550 XCL1P47992 114 aa14.32□□□□□ -0.12
YBX3-202ENST00000279550 SH2D6Q7Z4S9 175 aa14.32□□□□□ -0.12
YBX3-202ENST00000279550 SS18Q15532 418 aa14.32□□□□□ -0.12
YBX3-202ENST00000279550 PRO1854Q9UHT4 67 aa14.31□□□□□ -0.12
YBX3-202ENST00000279550 A0A0U1RRA0 63 aa14.3□□□□□ -0.12
YBX3-202ENST00000279550 TOMM7Q9P0U1 55 aa14.3□□□□□ -0.12
YBX3-202ENST00000279550 A0A0B4J2C4 111 aa14.29□□□□□ -0.12
YBX3-202ENST00000279550 ANGP03950 147 aaKnown RBP14.29□□□□□ -0.12
YBX3-202ENST00000279550 SFTA2Q6UW10 78 aa14.29□□□□□ -0.12
YBX3-202ENST00000279550 LYPD5Q6UWN5 251 aa14.29□□□□□ -0.12
YBX3-202ENST00000279550 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.28□□□□□ -0.12
YBX3-202ENST00000279550 IGHV3-33P01772 117 aa14.28□□□□□ -0.12
YBX3-202ENST00000279550 HERV-K104P63124 156 aa14.28□□□□□ -0.12
YBX3-202ENST00000279550 IFITM1P13164 125 aa14.27□□□□□ -0.13
YBX3-202ENST00000279550 REG3AQ06141 175 aa14.27□□□□□ -0.13
YBX3-202ENST00000279550 CIRBPQ14011 172 aaKnown RBP14.27□□□□□ -0.13
YBX3-202ENST00000279550 MEIG1Q5JSS6 88 aa14.27□□□□□ -0.13
YBX3-202ENST00000279550 SOSTDC1Q6X4U4 206 aa14.26□□□□□ -0.13
YBX3-202ENST00000279550 LINC00308Q8TCZ7 52 aa14.26□□□□□ -0.13
YBX3-202ENST00000279550 STAB2Q8WWQ8 2551 aa14.25□□□□□ -0.13
YBX3-202ENST00000279550 IGLV10-54A0A075B6I4 117 aa14.25□□□□□ -0.13
YBX3-202ENST00000279550 CHCHD10Q8WYQ3 142 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms