RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 KRTAP10-11P60412 298 aa12.56□□□□□ -0.4
CAPN1-201ENST00000279247 GTSF1LQ9H1H1 148 aa12.56□□□□□ -0.4
CAPN1-201ENST00000279247 TENM3Q9P273 2699 aa12.55□□□□□ -0.4
CAPN1-201ENST00000279247 LOC107984156A0A0G2JMH3 177 aa12.55□□□□□ -0.4
CAPN1-201ENST00000279247 A4D1N5 150 aa12.55□□□□□ -0.4
CAPN1-201ENST00000279247 ARL17AQ8IVW1 177 aa12.55□□□□□ -0.4
CAPN1-201ENST00000279247 TRAV26-1A0A087WT03 109 aa12.55□□□□□ -0.4
CAPN1-201ENST00000279247 PRB2P02812 416 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-201ENST00000279247 HERVK_113P63121 156 aa12.55□□□□□ -0.4
CAPN1-201ENST00000279247 ADAMTSL4-AS1Q5T5F5 129 aa12.55□□□□□ -0.4
CAPN1-201ENST00000279247 TOMM7Q9P0U1 55 aa12.54□□□□□ -0.4
CAPN1-201ENST00000279247 CIDEAO60543 219 aa12.54□□□□□ -0.4
CAPN1-201ENST00000279247 LINC00612Q8N6U2 182 aa12.53□□□□□ -0.4
CAPN1-201ENST00000279247 Q8NAQ8 132 aa12.53□□□□□ -0.4
CAPN1-201ENST00000279247 Q9H8V8 135 aa12.53□□□□□ -0.4
CAPN1-201ENST00000279247 TMEM238C9JI98 176 aa12.53□□□□□ -0.4
CAPN1-201ENST00000279247 TIRAPP58753 221 aa12.53□□□□□ -0.4
CAPN1-201ENST00000279247 Q8N3U1 123 aa12.53□□□□□ -0.4
CAPN1-201ENST00000279247 LYRM9A8MSI8 78 aa12.52□□□□□ -0.4
CAPN1-201ENST00000279247 CFC1BP0CG36 223 aa12.52□□□□□ -0.4
CAPN1-201ENST00000279247 CFC1P0CG37 223 aa12.52□□□□□ -0.4
CAPN1-201ENST00000279247 CSDC2Q9Y534 153 aaKnown RBP12.52□□□□□ -0.4
CAPN1-201ENST00000279247 H3BMG7 143 aa12.52□□□□□ -0.41
CAPN1-201ENST00000279247 SPANXB1Q9NS25 103 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-201ENST00000279247 MDFIQ99750 246 aa12.51□□□□□ -0.41
CAPN1-201ENST00000279247 SMIM1B2RUZ4 78 aa12.51□□□□□ -0.41
CAPN1-201ENST00000279247 G3V4G9 280 aa12.51□□□□□ -0.41
CAPN1-201ENST00000279247 C5orf38Q86SI9 138 aa12.51□□□□□ -0.41
CAPN1-201ENST00000279247 C11orf68Q9H3H3 251 aaKnown RBP12.5□□□□□ -0.41
CAPN1-201ENST00000279247 TSPAN13O95857 204 aa12.5□□□□□ -0.41
CAPN1-201ENST00000279247 SMAGPQ0VAQ4 97 aa12.5□□□□□ -0.41
CAPN1-201ENST00000279247 RNF183Q96D59 192 aa12.5□□□□□ -0.41
CAPN1-201ENST00000279247 EIF4EBP3O60516 100 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-201ENST00000279247 ATP5G1P05496 136 aa12.49□□□□□ -0.41
CAPN1-201ENST00000279247 ZFAND6Q6FIF0 208 aa12.49□□□□□ -0.41
CAPN1-201ENST00000279247 MIFP14174 115 aa12.49□□□□□ -0.41
CAPN1-201ENST00000279247 IGLV5-45A0A087WSX0 123 aa12.48□□□□□ -0.41
CAPN1-201ENST00000279247 A0A1B0GWB2 263 aa12.48□□□□□ -0.41
CAPN1-201ENST00000279247 SPART-AS1P0CW21 52 aa12.48□□□□□ -0.41
CAPN1-201ENST00000279247 XCL1P47992 114 aa12.48□□□□□ -0.41
CAPN1-201ENST00000279247 SHISA2Q6UWI4 295 aa12.48□□□□□ -0.41
CAPN1-201ENST00000279247 Q1RN00 199 aa12.48□□□□□ -0.41
CAPN1-201ENST00000279247 RNF151Q2KHN1 245 aa12.48□□□□□ -0.41
CAPN1-201ENST00000279247 MEIG1Q5JSS6 88 aa12.48□□□□□ -0.41
CAPN1-201ENST00000279247 LITAFQ99732 161 aa12.48□□□□□ -0.41
CAPN1-201ENST00000279247 RBX1P62877 108 aa12.47□□□□□ -0.41
CAPN1-201ENST00000279247 RPL24P83731 157 aaKnown RBP12.47□□□□□ -0.41
CAPN1-201ENST00000279247 IGLV10-54A0A075B6I4 117 aa12.46□□□□□ -0.41
CAPN1-201ENST00000279247 SCGB1C2P0DMR2 95 aa12.45□□□□□ -0.42
CAPN1-201ENST00000279247 PSMB2P49721 201 aa12.45□□□□□ -0.42
CAPN1-201ENST00000279247 PRO1854Q9UHT4 67 aa12.45□□□□□ -0.42
CAPN1-201ENST00000279247 WIPF1O43516 503 aa12.44□□□□□ -0.42
CAPN1-201ENST00000279247 IGLV5-39A0A0G2JS06 123 aa12.43□□□□□ -0.42
CAPN1-201ENST00000279247 H7C423 109 aa12.43□□□□□ -0.42
CAPN1-201ENST00000279247 NDUFA1O15239 70 aa12.43□□□□□ -0.42
CAPN1-201ENST00000279247 ANGP03950 147 aaKnown RBP12.43□□□□□ -0.42
CAPN1-201ENST00000279247 LINC00269Q8N2A0 174 aa12.43□□□□□ -0.42
CAPN1-201ENST00000279247 LINC00959A0A1B0GUT2 108 aa12.42□□□□□ -0.42
CAPN1-201ENST00000279247 WFDC2Q14508 124 aa12.41□□□□□ -0.42
CAPN1-201ENST00000279247 MIAQ16674 131 aa12.41□□□□□ -0.42
CAPN1-201ENST00000279247 CIRBPQ14011 172 aaKnown RBP12.41□□□□□ -0.42
CAPN1-201ENST00000279247 OCIAD2Q56VL3 154 aa12.4□□□□□ -0.43
CAPN1-201ENST00000279247 ERG28Q9UKR5 140 aa12.4□□□□□ -0.43
CAPN1-201ENST00000279247 IGHV3OR16-9A0A0B4J2B5 98 aa12.39□□□□□ -0.43
CAPN1-201ENST00000279247 MRAPQ8TCY5 172 aa12.39□□□□□ -0.43
CAPN1-201ENST00000279247 COX7B2Q8TF08 81 aa12.39□□□□□ -0.43
CAPN1-201ENST00000279247 IGHV3-33P01772 117 aa12.37□□□□□ -0.43
CAPN1-201ENST00000279247 MRPL23Q16540 153 aaKnown RBP12.37□□□□□ -0.43
CAPN1-201ENST00000279247 Q6ZTC4 211 aa12.37□□□□□ -0.43
CAPN1-201ENST00000279247 SH2D6Q7Z4S9 175 aa12.37□□□□□ -0.43
CAPN1-201ENST00000279247 FAM19A3Q7Z5A8 133 aa12.37□□□□□ -0.43
CAPN1-201ENST00000279247 SPANXDQ9BXN6 97 aa12.37□□□□□ -0.43
CAPN1-201ENST00000279247 SPANXCQ9NY87 97 aa12.37□□□□□ -0.43
CAPN1-201ENST00000279247 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-201ENST00000279247 PFN2P35080 140 aa12.37□□□□□ -0.43
CAPN1-201ENST00000279247 SS18Q15532 418 aa12.37□□□□□ -0.43
CAPN1-201ENST00000279247 ICOSQ9Y6W8 199 aa12.36□□□□□ -0.43
CAPN1-201ENST00000279247 DNHD1Q96M86 4753 aa12.36□□□□□ -0.43
CAPN1-201ENST00000279247 TCL1BO95988 128 aa12.36□□□□□ -0.43
CAPN1-201ENST00000279247 ETDBQ3ZM63 59 aa12.36□□□□□ -0.43
CAPN1-201ENST00000279247 A0A0J9YWU9 116 aa12.35□□□□□ -0.43
CAPN1-201ENST00000279247 LINC00308Q8TCZ7 52 aa12.35□□□□□ -0.43
CAPN1-201ENST00000279247 SOSTDC1Q6X4U4 206 aa12.35□□□□□ -0.43
CAPN1-201ENST00000279247 LINC00158P58513 81 aa12.34□□□□□ -0.43
CAPN1-201ENST00000279247 C6orf226Q5I0X4 101 aa12.34□□□□□ -0.43
CAPN1-201ENST00000279247 DEFB121Q5J5C9 76 aa12.34□□□□□ -0.43
CAPN1-201ENST00000279247 C2orf82Q6UX34 121 aa12.34□□□□□ -0.43
CAPN1-201ENST00000279247 A0A0B4J2C4 111 aa12.34□□□□□ -0.43
CAPN1-201ENST00000279247 NANOS2P60321 138 aaKnown RBP12.34□□□□□ -0.43
CAPN1-201ENST00000279247 EGFEM1PQ0D2K5 195 aa12.34□□□□□ -0.43
CAPN1-201ENST00000279247 REG3AQ06141 175 aa12.33□□□□□ -0.44
CAPN1-201ENST00000279247 A0A1B0GUV1 79 aa12.33□□□□□ -0.44
CAPN1-201ENST00000279247 KLK12Q9UKR0 248 aa12.33□□□□□ -0.44
CAPN1-201ENST00000279247 A0A087WZ39 114 aa12.32□□□□□ -0.44
CAPN1-201ENST00000279247 TEX48A0A1B0GUV7 120 aa12.32□□□□□ -0.44
CAPN1-201ENST00000279247 DNAH3Q8TD57 4116 aa12.32□□□□□ -0.44
CAPN1-201ENST00000279247 RPL13AP40429 203 aaKnown RBP12.32□□□□□ -0.44
CAPN1-201ENST00000279247 MIR7-3HGQ8N6C7 128 aa12.32□□□□□ -0.44
CAPN1-201ENST00000279247 CHCHD10Q8WYQ3 142 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-201ENST00000279247 VPS25Q9BRG1 176 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms